RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 U3KPZ7 1027 aaPredicted RBP15.61■□□□□ 0.09
ACTN1-202ENST00000376839 H3BQV1 296 aa15.61■□□□□ 0.09
ACTN1-202ENST00000376839 RIOK3O14730 519 aaKnown RBP15.61■□□□□ 0.09
ACTN1-202ENST00000376839 ZNF75DP51815 510 aa15.61■□□□□ 0.09
ACTN1-202ENST00000376839 MCMDC2Q4G0Z9 681 aa15.61■□□□□ 0.09
ACTN1-202ENST00000376839 IFFO2Q5TF58 517 aa15.61■□□□□ 0.09
ACTN1-202ENST00000376839 KRT28Q7Z3Y7 464 aa15.61■□□□□ 0.09
ACTN1-202ENST00000376839 HAUS7Q99871 368 aa15.61■□□□□ 0.09
ACTN1-202ENST00000376839 SCN11AQ9UI33 1791 aa15.6■□□□□ 0.09
ACTN1-202ENST00000376839 ZNF165P49910 485 aa15.6■□□□□ 0.09
ACTN1-202ENST00000376839 PLA2G4DQ86XP0 818 aa15.6■□□□□ 0.09
ACTN1-202ENST00000376839 TDRD7Q8NHU6 1098 aaKnown RBP15.6■□□□□ 0.09
ACTN1-202ENST00000376839 CCDC94Q9BW85 323 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-202ENST00000376839 TRIM5Q9C035 493 aa15.6■□□□□ 0.09
ACTN1-202ENST00000376839 FTOQ9C0B1 505 aaKnown RBP eCLIP15.6■□□□□ 0.09
ACTN1-202ENST00000376839 DRC7Q8IY82 874 aa15.6■□□□□ 0.09
ACTN1-202ENST00000376839 TRPM3Q9HCF6 1732 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-202ENST00000376839 A0A087WZG4 1122 aa15.59■□□□□ 0.09
ACTN1-202ENST00000376839 RFX7Q2KHR2 1363 aa15.59■□□□□ 0.09
ACTN1-202ENST00000376839 MEGF6O75095 1541 aa15.59■□□□□ 0.09
ACTN1-202ENST00000376839 A0A0G2JLW4 131 aa15.58■□□□□ 0.09
ACTN1-202ENST00000376839 PPFIA3O75145 1194 aa15.58■□□□□ 0.09
ACTN1-202ENST00000376839 ADD1P35611 737 aaKnown RBP15.58■□□□□ 0.09
ACTN1-202ENST00000376839 FGD1P98174 961 aa15.58■□□□□ 0.09
ACTN1-202ENST00000376839 SMARCC2Q8TAQ2 1214 aa15.58■□□□□ 0.09
ACTN1-202ENST00000376839 AFDNP55196 1824 aaKnown RBP15.58■□□□□ 0.09
ACTN1-202ENST00000376839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-202ENST00000376839 CTDNEP1O95476 244 aa15.58■□□□□ 0.08
ACTN1-202ENST00000376839 SNRPA1P09661 255 aaKnown RBP15.58■□□□□ 0.08
ACTN1-202ENST00000376839 NSUN7Q8NE18 718 aaKnown RBP15.58■□□□□ 0.08
ACTN1-202ENST00000376839 TATP17735 454 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-202ENST00000376839 CASP7P55210 303 aa15.58■□□□□ 0.08
ACTN1-202ENST00000376839 APOBRQ0VD83 1088 aa15.58■□□□□ 0.08
ACTN1-202ENST00000376839 CHAF1AQ13111 956 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-202ENST00000376839 ZSCAN25Q6NSZ9 544 aa15.58■□□□□ 0.08
ACTN1-202ENST00000376839 LMBR1LQ6UX01 489 aa15.58■□□□□ 0.08
ACTN1-202ENST00000376839 KBTBD3Q8NAB2 608 aa15.58■□□□□ 0.08
ACTN1-202ENST00000376839 ZSCAN16Q9H4T2 348 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-202ENST00000376839 PFKFB2O60825 505 aa15.57■□□□□ 0.08
ACTN1-202ENST00000376839 GOLIM4O00461 696 aa15.57■□□□□ 0.08
ACTN1-202ENST00000376839 C11orf57Q6ZUT1 292 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-202ENST00000376839 TTC5Q8N0Z6 440 aa15.57■□□□□ 0.08
ACTN1-202ENST00000376839 GOLPH3LQ9H4A5 285 aa15.57■□□□□ 0.08
ACTN1-202ENST00000376839 PRDM10Q9NQV6 1147 aa15.57■□□□□ 0.08
ACTN1-202ENST00000376839 CFAP45Q9UL16 551 aa15.57■□□□□ 0.08
ACTN1-202ENST00000376839 A0A087WWV3 80 aa15.56■□□□□ 0.08
ACTN1-202ENST00000376839 PTPDC1A2A3K4 754 aa15.56■□□□□ 0.08
ACTN1-202ENST00000376839 CCT2P78371 535 aaKnown RBP15.56■□□□□ 0.08
ACTN1-202ENST00000376839 CCDC144BQ3MJ40 725 aa15.56■□□□□ 0.08
ACTN1-202ENST00000376839 CCDC144CPQ8IYA2 1237 aa15.56■□□□□ 0.08
ACTN1-202ENST00000376839 SH3TC1Q8TE82 1336 aa15.56■□□□□ 0.08
ACTN1-202ENST00000376839 LAMA4Q16363 1823 aa15.56■□□□□ 0.08
ACTN1-202ENST00000376839 DHX32Q7L7V1 743 aaKnown RBP15.56■□□□□ 0.08
ACTN1-202ENST00000376839 IFNL2Q8IZJ0 200 aa15.56■□□□□ 0.08
ACTN1-202ENST00000376839 C16orf45Q96MC5 204 aaPredicted RBP15.56■□□□□ 0.08
ACTN1-202ENST00000376839 NCOA5Q9HCD5 579 aaKnown RBP15.56■□□□□ 0.08
ACTN1-202ENST00000376839 CLIP2Q9UDT6 1046 aa15.56■□□□□ 0.08
ACTN1-202ENST00000376839 ARFGEF2Q9Y6D5 1785 aa15.55■□□□□ 0.08
ACTN1-202ENST00000376839 CYP27B1O15528 508 aa15.55■□□□□ 0.08
ACTN1-202ENST00000376839 CACTINQ8WUQ7 758 aaKnown RBP15.55■□□□□ 0.08
ACTN1-202ENST00000376839 NEUROD6Q96NK8 337 aa15.55■□□□□ 0.08
ACTN1-202ENST00000376839 TIMM10P62072 90 aa15.55■□□□□ 0.08
ACTN1-202ENST00000376839 IQCB1Q15051 598 aa15.55■□□□□ 0.08
ACTN1-202ENST00000376839 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-202ENST00000376839 CCAR1Q8IX12 1150 aaKnown RBP15.55■□□□□ 0.08
ACTN1-202ENST00000376839 FMNL2Q96PY5 1086 aa15.55■□□□□ 0.08
ACTN1-202ENST00000376839 LLPHQ9BRT6 129 aaKnown RBP15.55■□□□□ 0.08
ACTN1-202ENST00000376839 FOXO4P98177 505 aa15.54■□□□□ 0.08
ACTN1-202ENST00000376839 PPP4R3BQ5MIZ7 849 aa15.54■□□□□ 0.08
ACTN1-202ENST00000376839 CHST3Q7LGC8 479 aa15.54■□□□□ 0.08
ACTN1-202ENST00000376839 ATG9AQ7Z3C6 839 aa15.54■□□□□ 0.08
ACTN1-202ENST00000376839 USP28Q96RU2 1077 aa15.54■□□□□ 0.08
ACTN1-202ENST00000376839 GUCY1B3Q02153 619 aa15.54■□□□□ 0.08
ACTN1-202ENST00000376839 NAA16Q6N069 864 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-202ENST00000376839 PAG1Q9NWQ8 432 aa15.54■□□□□ 0.08
ACTN1-202ENST00000376839 RCOR1Q9UKL0 485 aa15.54■□□□□ 0.08
ACTN1-202ENST00000376839 PALLDQ8WX93 1383 aa15.53■□□□□ 0.08
ACTN1-202ENST00000376839 CTIFO43310 598 aaKnown RBP15.53■□□□□ 0.08
ACTN1-202ENST00000376839 EXOSC10Q01780 885 aaKnown RBP15.53■□□□□ 0.08
ACTN1-202ENST00000376839 SMAP1Q8IYB5 467 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-202ENST00000376839 DDX17Q92841 729 aaKnown RBP15.53■□□□□ 0.08
ACTN1-202ENST00000376839 NAP1L2Q9ULW6 460 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-202ENST00000376839 SNW1Q13573 536 aaKnown RBP15.53■□□□□ 0.08
ACTN1-202ENST00000376839 ATP2B3Q16720 1220 aa15.53■□□□□ 0.08
ACTN1-202ENST00000376839 PLBD2Q8NHP8 589 aa15.53■□□□□ 0.08
ACTN1-202ENST00000376839 HMGB1P09429 215 aaKnown RBP15.53■□□□□ 0.08
ACTN1-202ENST00000376839 CSB-PGBD3P0DP91 1061 aa15.53■□□□□ 0.08
ACTN1-202ENST00000376839 ARID5BQ14865 1188 aa15.53■□□□□ 0.08
ACTN1-202ENST00000376839 ILDR1Q86SU0 546 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-202ENST00000376839 DCAF5Q96JK2 942 aa15.53■□□□□ 0.08
ACTN1-202ENST00000376839 PRDM4Q9UKN5 801 aa15.53■□□□□ 0.08
ACTN1-202ENST00000376839 MYH15Q9Y2K3 1946 aa15.52■□□□□ 0.08
ACTN1-202ENST00000376839 SALL1Q9NSC2 1324 aa15.52■□□□□ 0.08
ACTN1-202ENST00000376839 E7EWF7 191 aa15.52■□□□□ 0.08
ACTN1-202ENST00000376839 HSPD1P10809 573 aaKnown RBP15.52■□□□□ 0.08
ACTN1-202ENST00000376839 ANKRD7Q92527 254 aa15.52■□□□□ 0.08
ACTN1-202ENST00000376839 ERCC4Q92889 916 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-202ENST00000376839 DSCC1Q9BVC3 393 aa15.52■□□□□ 0.08
ACTN1-202ENST00000376839 AGXT2Q9BYV1 514 aa15.52■□□□□ 0.08
ACTN1-202ENST00000376839 C1orf167Q5SNV9 1468 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms