RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 CHL1O00533 1208 aa17.1■□□□□ 0.33
CLCN6-205ENST00000376492 RPS12P25398 132 aaKnown RBP17.1■□□□□ 0.33
CLCN6-205ENST00000376492 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
CLCN6-205ENST00000376492 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
CLCN6-205ENST00000376492 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
CLCN6-205ENST00000376492 C2orf69Q8N8R5 385 aa17.1■□□□□ 0.33
CLCN6-205ENST00000376492 TBC1D16Q8TBP0 767 aa17.1■□□□□ 0.33
CLCN6-205ENST00000376492 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
CLCN6-205ENST00000376492 ZNF157P51786 506 aaPredicted RBP17.09■□□□□ 0.33
CLCN6-205ENST00000376492 RNF186Q9NXI6 227 aa17.09■□□□□ 0.33
CLCN6-205ENST00000376492 SAGE1Q9NXZ1 904 aa17.09■□□□□ 0.33
CLCN6-205ENST00000376492 TNRC18O15417 2968 aaPredicted RBP17.08■□□□□ 0.33
CLCN6-205ENST00000376492 IRS4O14654 1257 aaPredicted RBP17.08■□□□□ 0.32
CLCN6-205ENST00000376492 TRPA1O75762 1119 aa17.08■□□□□ 0.32
CLCN6-205ENST00000376492 SOX10P56693 466 aa17.08■□□□□ 0.32
CLCN6-205ENST00000376492 CCDC102AQ96A19 550 aa17.08■□□□□ 0.32
CLCN6-205ENST00000376492 EYA3Q99504 573 aa17.08■□□□□ 0.32
CLCN6-205ENST00000376492 TRIM35Q9UPQ4 493 aa17.08■□□□□ 0.32
CLCN6-205ENST00000376492 SLC10A3P09131 477 aa17.07■□□□□ 0.32
CLCN6-205ENST00000376492 SULF1Q8IWU6 871 aa17.07■□□□□ 0.32
CLCN6-205ENST00000376492 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
CLCN6-205ENST00000376492 RPS8P62241 208 aaKnown RBP17.06■□□□□ 0.32
CLCN6-205ENST00000376492 CDCA5Q96FF9 252 aa17.06■□□□□ 0.32
CLCN6-205ENST00000376492 SEC31BQ9NQW1 1179 aa17.06■□□□□ 0.32
CLCN6-205ENST00000376492 DBF4Q9UBU7 674 aaPredicted RBP17.06■□□□□ 0.32
CLCN6-205ENST00000376492 UFL1O94874 794 aa17.05■□□□□ 0.32
CLCN6-205ENST00000376492 CSRNP1Q96S65 589 aa17.05■□□□□ 0.32
CLCN6-205ENST00000376492 ZC3H12CQ9C0D7 883 aaKnown RBP17.05■□□□□ 0.32
CLCN6-205ENST00000376492 SCN9AQ15858 1988 aa17.05■□□□□ 0.32
CLCN6-205ENST00000376492 HOXB7P09629 217 aa17.04■□□□□ 0.32
CLCN6-205ENST00000376492 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
CLCN6-205ENST00000376492 RASAL3Q86YV0 1011 aa17.04■□□□□ 0.32
CLCN6-205ENST00000376492 PODXL2Q9NZ53 605 aa17.04■□□□□ 0.32
CLCN6-205ENST00000376492 ANKIB1Q9P2G1 1089 aa17.04■□□□□ 0.32
CLCN6-205ENST00000376492 ZNF280AP59817 542 aaPredicted RBP17.03■□□□□ 0.32
CLCN6-205ENST00000376492 TRIM28Q13263 835 aaKnown RBP17.03■□□□□ 0.32
CLCN6-205ENST00000376492 SCARF1Q14162 830 aa17.03■□□□□ 0.32
CLCN6-205ENST00000376492 DUSP27Q5VZP5 1158 aa17.03■□□□□ 0.32
CLCN6-205ENST00000376492 ZBTB38Q8NAP3 1195 aaPredicted RBP17.03■□□□□ 0.32
CLCN6-205ENST00000376492 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
CLCN6-205ENST00000376492 GGA1Q9UJY5 639 aa17.03■□□□□ 0.32
CLCN6-205ENST00000376492 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
CLCN6-205ENST00000376492 G3V3G9 751 aa17.02■□□□□ 0.32
CLCN6-205ENST00000376492 DCAF8Q5TAQ9 597 aa17.02■□□□□ 0.32
CLCN6-205ENST00000376492 RSBN1LQ6PCB5 846 aaPredicted RBP17.02■□□□□ 0.32
CLCN6-205ENST00000376492 JARID2Q92833 1246 aaPredicted RBP17.02■□□□□ 0.32
CLCN6-205ENST00000376492 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.32
CLCN6-205ENST00000376492 POLR2AP24928 1970 aaKnown RBP17.01■□□□□ 0.31
CLCN6-205ENST00000376492 MOB2Q70IA6 237 aa17.01■□□□□ 0.31
CLCN6-205ENST00000376492 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
CLCN6-205ENST00000376492 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
CLCN6-205ENST00000376492 ZNF609O15014 1411 aa17.01■□□□□ 0.31
CLCN6-205ENST00000376492 PDE4DIPQ5VU43 2346 aa17.01■□□□□ 0.31
CLCN6-205ENST00000376492 GOLGA2Q08379 1002 aa17■□□□□ 0.31
CLCN6-205ENST00000376492 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
CLCN6-205ENST00000376492 CTU1Q7Z7A3 348 aaKnown RBP17■□□□□ 0.31
CLCN6-205ENST00000376492 AGBL3Q8NEM8 1001 aa17■□□□□ 0.31
CLCN6-205ENST00000376492 MYD88Q99836 296 aa17■□□□□ 0.31
CLCN6-205ENST00000376492 MBIPQ9NS73 344 aa17■□□□□ 0.31
CLCN6-205ENST00000376492 WTIPA6NIX2 430 aaPredicted RBP16.99■□□□□ 0.31
CLCN6-205ENST00000376492 WDR43Q15061 677 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLCN6-205ENST00000376492 GMLQ99445 158 aa16.99■□□□□ 0.31
CLCN6-205ENST00000376492 MYOZ2Q9NPC6 264 aa16.99■□□□□ 0.31
CLCN6-205ENST00000376492 ADAMTS8Q9UP79 889 aa16.99■□□□□ 0.31
CLCN6-205ENST00000376492 PAPPA2Q9BXP8 1791 aa16.98■□□□□ 0.31
CLCN6-205ENST00000376492 ANP32CO43423 234 aa16.98■□□□□ 0.31
CLCN6-205ENST00000376492 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
CLCN6-205ENST00000376492 CCDC152Q4G0S7 254 aa16.98■□□□□ 0.31
CLCN6-205ENST00000376492 PRAMEF18Q5VWM3 479 aa16.98■□□□□ 0.31
CLCN6-205ENST00000376492 UBE2Q2LH0YL09 131 aa16.97■□□□□ 0.31
CLCN6-205ENST00000376492 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
CLCN6-205ENST00000376492 FKBP1BP68106 108 aa16.97■□□□□ 0.31
CLCN6-205ENST00000376492 MXD3Q9BW11 206 aa16.97■□□□□ 0.31
CLCN6-205ENST00000376492 HPS5Q9UPZ3 1129 aa16.97■□□□□ 0.31
CLCN6-205ENST00000376492 XDHP47989 1333 aa16.96■□□□□ 0.31
CLCN6-205ENST00000376492 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
CLCN6-205ENST00000376492 PDE8AO60658 829 aa16.96■□□□□ 0.31
CLCN6-205ENST00000376492 CCDC191Q8NCU4 936 aa16.96■□□□□ 0.31
CLCN6-205ENST00000376492 PCDH10Q9P2E7 1040 aa16.96■□□□□ 0.31
CLCN6-205ENST00000376492 PITPNM2Q9BZ72 1349 aa16.96■□□□□ 0.3
CLCN6-205ENST00000376492 USP17L3A6NCW0 530 aa16.95■□□□□ 0.3
CLCN6-205ENST00000376492 USP17L4A6NCW7 530 aa16.95■□□□□ 0.3
CLCN6-205ENST00000376492 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
CLCN6-205ENST00000376492 NBPF9Q3BBW0 867 aa16.95■□□□□ 0.3
CLCN6-205ENST00000376492 USP17L1Q7RTZ2 530 aa16.95■□□□□ 0.3
CLCN6-205ENST00000376492 ANKRD18AQ8IVF6 992 aa16.95■□□□□ 0.3
CLCN6-205ENST00000376492 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
CLCN6-205ENST00000376492 ZNF296Q8WUU4 475 aaPredicted RBP16.95■□□□□ 0.3
CLCN6-205ENST00000376492 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
CLCN6-205ENST00000376492 AKAP11Q9UKA4 1901 aa16.94■□□□□ 0.3
CLCN6-205ENST00000376492 ZNF853P0CG23 659 aa16.94■□□□□ 0.3
CLCN6-205ENST00000376492 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
CLCN6-205ENST00000376492 ATP2B4P23634 1241 aa16.94■□□□□ 0.3
CLCN6-205ENST00000376492 MKRN3Q13064 507 aaKnown RBP16.94■□□□□ 0.3
CLCN6-205ENST00000376492 CTSWP56202 376 aa16.93■□□□□ 0.3
CLCN6-205ENST00000376492 TTLL12Q14166 644 aaPredicted RBP16.93■□□□□ 0.3
CLCN6-205ENST00000376492 CCDC184Q52MB2 194 aa16.93■□□□□ 0.3
CLCN6-205ENST00000376492 DIEXFQ68CQ4 756 aaKnown RBP16.93■□□□□ 0.3
CLCN6-205ENST00000376492 PODNQ7Z5L7 613 aa16.93■□□□□ 0.3
CLCN6-205ENST00000376492 PSME4Q14997 1843 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms