RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 MRVI1Q9Y6F6 885 aa17.21■□□□□ 0.35
UBQLN1-202ENST00000376395 NAA30Q147X3 362 aaPredicted RBP17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 CLSTN2Q9H4D0 955 aa17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 PAG1Q9NWQ8 432 aa17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 IPO7O95373 1038 aaKnown RBP17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 SART3Q15020 963 aaKnown RBP17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 TNNI3KQ59H18 835 aa17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 PRDM11Q9NQV5 511 aa17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 DNAI1Q9UI46 699 aa17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 FPGT-TNNI3KV9GXZ4 949 aa17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 MROH2AA6NES4 1674 aa17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 CTAGE5O15320 804 aa17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 SNRPA1P09661 255 aaKnown RBP17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 PTPN21Q16825 1174 aa17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 DHX32Q7L7V1 743 aaKnown RBP17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 DDX17Q92841 729 aaKnown RBP17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.2■□□□□ 0.34
UBQLN1-202ENST00000376395 ARID5BQ14865 1188 aa17.19■□□□□ 0.34
UBQLN1-202ENST00000376395 MRPS27Q92552 414 aaKnown RBP17.19■□□□□ 0.34
UBQLN1-202ENST00000376395 ZNF790Q6PG37 636 aa17.19■□□□□ 0.34
UBQLN1-202ENST00000376395 SYT10Q6XYQ8 523 aa17.19■□□□□ 0.34
UBQLN1-202ENST00000376395 ZSCAN25Q6NSZ9 544 aa17.19■□□□□ 0.34
UBQLN1-202ENST00000376395 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
UBQLN1-202ENST00000376395 CAMSAP1Q5T5Y3 1602 aa17.19■□□□□ 0.34
UBQLN1-202ENST00000376395 SASH1O94885 1247 aa17.19■□□□□ 0.34
UBQLN1-202ENST00000376395 USP28Q96RU2 1077 aa17.19■□□□□ 0.34
UBQLN1-202ENST00000376395 CCDC66A2RUB6 948 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 SMTNL1A8MU46 457 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 ARHGEF40Q8TER5 1519 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 TMEM2Q9UHN6 1383 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 TRIM22Q8IYM9 498 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 KIAA1524Q8TCG1 905 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 NRXN1Q9ULB1 1477 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 USP6P35125 1406 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 TOP1P11387 765 aaKnown RBP17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 GCKRQ14397 625 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 TM6SF1Q9BZW5 370 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 TAF6LQ9Y6J9 622 aa17.18■□□□□ 0.34
UBQLN1-202ENST00000376395 CFAP74Q9C0B2 1584 aa17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 HECW2Q9P2P5 1572 aa17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 CPSF1Q10570 1443 aaKnown RBP17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 MARCH6O60337 910 aa17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 PAXBP1Q9Y5B6 917 aa17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 ALKQ9UM73 1620 aa17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 IFNL2Q8IZJ0 200 aa17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 CNNM3Q8NE01 707 aa17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 TTC14Q96N46 770 aa17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 ZFP91Q96JP5 570 aaPredicted RBP17.17■□□□□ 0.34
UBQLN1-202ENST00000376395 CPS1P31327 1500 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 HSP90B2PQ58FF3 399 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 CACTINQ8WUQ7 758 aaKnown RBP17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 AIDAQ96BJ3 306 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 CCP110O43303 1012 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 PRC1O43663 620 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 TDO2P48775 406 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 CWC25Q9NXE8 425 aaPredicted RBP17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 ABCF2Q9UG63 623 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 POLA2Q14181 598 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 NECTIN1Q15223 517 aa17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 DBNLQ9UJU6 430 aaKnown RBP17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 COL3A1P02461 1466 aaPredicted RBP17.16■□□□□ 0.34
UBQLN1-202ENST00000376395 SPTLC2O15270 562 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 ELF2Q15723 593 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 LDHAL6AQ6ZMR3 332 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 PPFIBP1Q86W92 1011 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 MINDY4BA8MYZ0 360 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 SYKP43405 635 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 UBASH3AP57075 661 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 HELBQ8NG08 1087 aaPredicted RBP17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 CBFA2T2O43439 604 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 TAF5LO75529 589 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 XBP1P17861 261 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 IFIT5Q13325 482 aaKnown RBP17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 GTF3C6Q969F1 213 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 IQSEC3Q9UPP2 1182 aaPredicted RBP17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 TBX22Q9Y458 520 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 MYO3AQ8NEV4 1616 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 CYP21A2P08686 494 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 TMCO3Q6UWJ1 677 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 NOC3LQ8WTT2 800 aaKnown RBP17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 CD163L1Q9NR16 1453 aa17.15■□□□□ 0.34
UBQLN1-202ENST00000376395 INO80Q9ULG1 1556 aaPredicted RBP17.14■□□□□ 0.34
UBQLN1-202ENST00000376395 NEURL1BA8MQ27 555 aa17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 CDKL5O76039 1030 aa17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 FILIP1LQ4L180 1135 aa17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 SCRN1Q12765 414 aa17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 C11orf57Q6ZUT1 292 aaPredicted RBP17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 SMAP1Q8IYB5 467 aaPredicted RBP17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 SLC26A6Q9BXS9 759 aa17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 A1BGP04217 495 aa17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 PDE4CQ08493 712 aa17.14■□□□□ 0.33
UBQLN1-202ENST00000376395 IFIT3O14879 490 aaKnown RBP17.13■□□□□ 0.33
UBQLN1-202ENST00000376395 NEMFO60524 1076 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms