RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ELL2O00472 640 aaPredicted RBP29.93■■■□□ 2.38
C9orf47-202ENST00000375850 PDE8AO60658 829 aa29.93■■■□□ 2.38
C9orf47-202ENST00000375850 METTL22Q9BUU2 404 aaPredicted RBP29.93■■■□□ 2.38
C9orf47-202ENST00000375850 TAF1P21675 1872 aa29.92■■■□□ 2.38
C9orf47-202ENST00000375850 BRPF1P55201 1214 aaPredicted RBP29.91■■■□□ 2.38
C9orf47-202ENST00000375850 ZNF408Q9H9D4 720 aa29.91■■■□□ 2.38
C9orf47-202ENST00000375850 ANKIB1Q9P2G1 1089 aa29.91■■■□□ 2.38
C9orf47-202ENST00000375850 GGA1Q9UJY5 639 aa29.91■■■□□ 2.38
C9orf47-202ENST00000375850 G3V3G9 751 aa29.9■■■□□ 2.38
C9orf47-202ENST00000375850 DCAF8Q5TAQ9 597 aa29.9■■■□□ 2.38
C9orf47-202ENST00000375850 SAMD7Q7Z3H4 446 aa29.9■■■□□ 2.38
C9orf47-202ENST00000375850 C8orf58Q8NAV2 365 aa29.9■■■□□ 2.38
C9orf47-202ENST00000375850 SHTN1A0MZ66 631 aa29.89■■■□□ 2.38
C9orf47-202ENST00000375850 UFL1O94874 794 aa29.89■■■□□ 2.38
C9orf47-202ENST00000375850 VIL1P09327 827 aaKnown RBP29.89■■■□□ 2.38
C9orf47-202ENST00000375850 DOK7Q18PE1 504 aa29.89■■■□□ 2.38
C9orf47-202ENST00000375850 KRT26Q7Z3Y9 468 aa29.89■■■□□ 2.38
C9orf47-202ENST00000375850 USP48Q86UV5 1035 aa29.89■■■□□ 2.38
C9orf47-202ENST00000375850 DCPSQ96C86 337 aaKnown RBP29.89■■■□□ 2.38
C9orf47-202ENST00000375850 SEC31BQ9NQW1 1179 aa29.89■■■□□ 2.38
C9orf47-202ENST00000375850 RTL9Q8NET4 1388 aa29.89■■■□□ 2.37
C9orf47-202ENST00000375850 AOC2O75106 756 aa29.88■■■□□ 2.37
C9orf47-202ENST00000375850 NOGQ13253 232 aa29.88■■■□□ 2.37
C9orf47-202ENST00000375850 ZNF609O15014 1411 aa29.88■■■□□ 2.37
C9orf47-202ENST00000375850 TBC1D10BQ4KMP7 808 aaPredicted RBP29.87■■■□□ 2.37
C9orf47-202ENST00000375850 ANKRD18AQ8IVF6 992 aa29.87■■■□□ 2.37
C9orf47-202ENST00000375850 ABHD8Q96I13 439 aa29.86■■■□□ 2.37
C9orf47-202ENST00000375850 XDHP47989 1333 aa29.86■■■□□ 2.37
C9orf47-202ENST00000375850 HUNKP57058 714 aa29.85■■■□□ 2.37
C9orf47-202ENST00000375850 NEXNQ0ZGT2 675 aa29.85■■■□□ 2.37
C9orf47-202ENST00000375850 CCDC27Q2M243 656 aa29.85■■■□□ 2.37
C9orf47-202ENST00000375850 KSR2Q6VAB6 950 aa29.85■■■□□ 2.37
C9orf47-202ENST00000375850 AGBL3Q8NEM8 1001 aa29.85■■■□□ 2.37
C9orf47-202ENST00000375850 CDC5LQ99459 802 aaKnown RBP29.85■■■□□ 2.37
C9orf47-202ENST00000375850 STK31Q9BXU1 1019 aa29.85■■■□□ 2.37
C9orf47-202ENST00000375850 MAP3K2Q9Y2U5 619 aa29.85■■■□□ 2.37
C9orf47-202ENST00000375850 KIF4BQ2VIQ3 1234 aa29.84■■■□□ 2.37
C9orf47-202ENST00000375850 C2orf69Q8N8R5 385 aa29.84■■■□□ 2.37
C9orf47-202ENST00000375850 KCNQ5Q9NR82 932 aa29.84■■■□□ 2.37
C9orf47-202ENST00000375850 COL4A1P02462 1669 aa29.84■■■□□ 2.37
C9orf47-202ENST00000375850 ATP2B4P23634 1241 aa29.83■■■□□ 2.37
C9orf47-202ENST00000375850 GBA2Q9HCG7 927 aaPredicted RBP29.83■■■□□ 2.37
C9orf47-202ENST00000375850 RBM26Q5T8P6 1007 aaKnown RBP29.82■■■□□ 2.36
C9orf47-202ENST00000375850 SULF1Q8IWU6 871 aa29.82■■■□□ 2.36
C9orf47-202ENST00000375850 CTSWP56202 376 aa29.81■■■□□ 2.36
C9orf47-202ENST00000375850 NCBP3Q53F19 620 aaKnown RBP29.81■■■□□ 2.36
C9orf47-202ENST00000375850 RSBN1LQ6PCB5 846 aaPredicted RBP29.81■■■□□ 2.36
C9orf47-202ENST00000375850 PODNQ7Z5L7 613 aa29.81■■■□□ 2.36
C9orf47-202ENST00000375850 CCDC102AQ96A19 550 aa29.81■■■□□ 2.36
C9orf47-202ENST00000375850 PI4KAP2A4QPH2 592 aa29.8■■■□□ 2.36
C9orf47-202ENST00000375850 EGFRP00533 1210 aa29.8■■■□□ 2.36
C9orf47-202ENST00000375850 ZNF280AP59817 542 aaPredicted RBP29.8■■■□□ 2.36
C9orf47-202ENST00000375850 PI4KAP1Q8N8J0 262 aa29.8■■■□□ 2.36
C9orf47-202ENST00000375850 RGMBQ6NW40 437 aa29.79■■■□□ 2.36
C9orf47-202ENST00000375850 TSPYL6Q8N831 410 aa29.79■■■□□ 2.36
C9orf47-202ENST00000375850 IGKV5-2P06315 115 aa29.78■■■□□ 2.36
C9orf47-202ENST00000375850 CCDC85AQ96PX6 553 aaPredicted RBP29.78■■■□□ 2.36
C9orf47-202ENST00000375850 BSDC1Q9NW68 430 aaPredicted RBP29.78■■■□□ 2.36
C9orf47-202ENST00000375850 GGA3Q9NZ52 723 aa29.78■■■□□ 2.36
C9orf47-202ENST00000375850 IL16Q14005 1332 aa29.77■■■□□ 2.36
C9orf47-202ENST00000375850 ADM5C9JUS6 153 aa29.76■■■□□ 2.35
C9orf47-202ENST00000375850 TTLL11Q8NHH1 800 aa29.76■■■□□ 2.35
C9orf47-202ENST00000375850 JARID2Q92833 1246 aaPredicted RBP29.76■■■□□ 2.35
C9orf47-202ENST00000375850 USP17L3A6NCW0 530 aa29.75■■■□□ 2.35
C9orf47-202ENST00000375850 USP17L4A6NCW7 530 aa29.75■■■□□ 2.35
C9orf47-202ENST00000375850 USP17L8P0C7I0 530 aa29.75■■■□□ 2.35
C9orf47-202ENST00000375850 TWISTNBQ3B726 338 aaPredicted RBP29.75■■■□□ 2.35
C9orf47-202ENST00000375850 USP17L1Q7RTZ2 530 aa29.75■■■□□ 2.35
C9orf47-202ENST00000375850 WWC1Q8IX03 1113 aa29.75■■■□□ 2.35
C9orf47-202ENST00000375850 TSKSQ9UJT2 592 aa29.75■■■□□ 2.35
C9orf47-202ENST00000375850 MED23Q9ULK4 1368 aa29.75■■■□□ 2.35
C9orf47-202ENST00000375850 TSR2Q969E8 191 aaKnown RBP29.74■■■□□ 2.35
C9orf47-202ENST00000375850 GMLQ99445 158 aa29.74■■■□□ 2.35
C9orf47-202ENST00000375850 PITPNM2Q9BZ72 1349 aa29.73■■■□□ 2.35
C9orf47-202ENST00000375850 NEURL1BA8MQ27 555 aa29.73■■■□□ 2.35
C9orf47-202ENST00000375850 MMP14P50281 582 aa29.73■■■□□ 2.35
C9orf47-202ENST00000375850 FKBP1BP68106 108 aa29.73■■■□□ 2.35
C9orf47-202ENST00000375850 SAGE1Q9NXZ1 904 aa29.73■■■□□ 2.35
C9orf47-202ENST00000375850 MINPP1Q9UNW1 487 aa29.73■■■□□ 2.35
C9orf47-202ENST00000375850 FAM155AB1AL88 458 aaPredicted RBP29.72■■■□□ 2.35
C9orf47-202ENST00000375850 ZNF157P51786 506 aaPredicted RBP29.72■■■□□ 2.35
C9orf47-202ENST00000375850 SCARF1Q14162 830 aa29.72■■■□□ 2.35
C9orf47-202ENST00000375850 DLK2Q6UY11 383 aa29.72■■■□□ 2.35
C9orf47-202ENST00000375850 SCN9AQ15858 1988 aa29.72■■■□□ 2.35
C9orf47-202ENST00000375850 H7C1W4 665 aa29.71■■■□□ 2.35
C9orf47-202ENST00000375850 SLC4A2P04920 1241 aa29.71■■■□□ 2.35
C9orf47-202ENST00000375850 REM2Q8IYK8 340 aaPredicted RBP29.71■■■□□ 2.35
C9orf47-202ENST00000375850 GREM2Q9H772 168 aa29.71■■■□□ 2.35
C9orf47-202ENST00000375850 MYOZ2Q9NPC6 264 aa29.71■■■□□ 2.35
C9orf47-202ENST00000375850 MYO3BQ8WXR4 1341 aa29.71■■■□□ 2.35
C9orf47-202ENST00000375850 IGHMBP2P38935 993 aaKnown RBP29.7■■■□□ 2.35
C9orf47-202ENST00000375850 ANGEL2Q5VTE6 544 aaKnown RBP29.7■■■□□ 2.35
C9orf47-202ENST00000375850 CDCA5Q96FF9 252 aa29.7■■■□□ 2.35
C9orf47-202ENST00000375850 PLA2G12BQ9BX93 195 aa29.7■■■□□ 2.35
C9orf47-202ENST00000375850 MYH16Q9H6N6 1097 aa29.7■■■□□ 2.35
C9orf47-202ENST00000375850 LEMD3Q9Y2U8 911 aa29.7■■■□□ 2.35
C9orf47-202ENST00000375850 CCT4P50991 539 aaKnown RBP29.69■■■□□ 2.34
C9orf47-202ENST00000375850 CWF19L2Q2TBE0 894 aaKnown RBP29.69■■■□□ 2.34
C9orf47-202ENST00000375850 COA1Q9GZY4 146 aa29.69■■■□□ 2.34
C9orf47-202ENST00000375850 UBE3BQ7Z3V4 1068 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms