RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 GJB2P29033 226 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 SLC15A2Q16348 729 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 ADCK5Q3MIX3 580 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 TNNI3KQ59H18 835 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 BLOC1S2Q6QNY1 142 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 NAP1L5Q96NT1 182 aaPredicted RBP16.62■□□□□ 0.25
HMGCL-203ENST00000374490 SIL1Q9H173 461 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 BOLA2Q9H3K6 86 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 CCDC39Q9UFE4 941 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 FPGT-TNNI3KV9GXZ4 949 aa16.62■□□□□ 0.25
HMGCL-203ENST00000374490 EPHA10Q5JZY3 1008 aa16.61■□□□□ 0.25
HMGCL-203ENST00000374490 PDGFDQ9GZP0 370 aaPredicted RBP16.61■□□□□ 0.25
HMGCL-203ENST00000374490 TLR7Q9NYK1 1049 aaKnown RBP16.61■□□□□ 0.25
HMGCL-203ENST00000374490 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
HMGCL-203ENST00000374490 A0A0D9SFI3 127 aa16.6■□□□□ 0.25
HMGCL-203ENST00000374490 LARGE1O95461 756 aa16.6■□□□□ 0.25
HMGCL-203ENST00000374490 PTPN12Q05209 780 aaKnown RBP16.6■□□□□ 0.25
HMGCL-203ENST00000374490 ACSBG1Q96GR2 724 aa16.6■□□□□ 0.25
HMGCL-203ENST00000374490 NOL7Q9UMY1 257 aaKnown RBP16.6■□□□□ 0.25
HMGCL-203ENST00000374490 MTMR6Q9Y217 621 aa16.6■□□□□ 0.25
HMGCL-203ENST00000374490 ATF5Q9Y2D1 282 aaPredicted RBP16.6■□□□□ 0.25
HMGCL-203ENST00000374490 DOT1LQ8TEK3 1739 aa16.6■□□□□ 0.25
HMGCL-203ENST00000374490 RPS6KB1P23443 525 aa16.59■□□□□ 0.25
HMGCL-203ENST00000374490 USPL1Q5W0Q7 1092 aa16.59■□□□□ 0.25
HMGCL-203ENST00000374490 CNPY2Q9Y2B0 182 aa16.59■□□□□ 0.25
HMGCL-203ENST00000374490 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
HMGCL-203ENST00000374490 GADD45BO75293 160 aaPredicted RBP16.59■□□□□ 0.25
HMGCL-203ENST00000374490 CPA1P15085 419 aa16.59■□□□□ 0.25
HMGCL-203ENST00000374490 PTGER2P43116 358 aa16.59■□□□□ 0.25
HMGCL-203ENST00000374490 MTFR1LQ9H019 292 aa16.59■□□□□ 0.25
HMGCL-203ENST00000374490 GPR108Q9NPR9 543 aa16.59■□□□□ 0.25
HMGCL-203ENST00000374490 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
HMGCL-203ENST00000374490 A0A087WZG4 1122 aa16.58■□□□□ 0.24
HMGCL-203ENST00000374490 PTCD1O75127 700 aaKnown RBP16.58■□□□□ 0.24
HMGCL-203ENST00000374490 CASP7P55210 303 aa16.58■□□□□ 0.24
HMGCL-203ENST00000374490 ME3Q16798 604 aa16.58■□□□□ 0.24
HMGCL-203ENST00000374490 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.58■□□□□ 0.24
HMGCL-203ENST00000374490 UBE3BQ7Z3V4 1068 aa16.58■□□□□ 0.24
HMGCL-203ENST00000374490 HAUS7Q99871 368 aa16.58■□□□□ 0.24
HMGCL-203ENST00000374490 GDPD2Q9HCC8 539 aa16.58■□□□□ 0.24
HMGCL-203ENST00000374490 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.24
HMGCL-203ENST00000374490 AFDNP55196 1824 aaKnown RBP16.58■□□□□ 0.24
HMGCL-203ENST00000374490 KAT6BQ8WYB5 2073 aa16.58■□□□□ 0.24
HMGCL-203ENST00000374490 ZNF500O60304 480 aaPredicted RBP16.57■□□□□ 0.24
HMGCL-203ENST00000374490 TAF5LO75529 589 aa16.57■□□□□ 0.24
HMGCL-203ENST00000374490 TFCP2Q12800 502 aa16.57■□□□□ 0.24
HMGCL-203ENST00000374490 KLHDC4Q8TBB5 520 aa16.57■□□□□ 0.24
HMGCL-203ENST00000374490 DBNLQ9UJU6 430 aaKnown RBP16.57■□□□□ 0.24
HMGCL-203ENST00000374490 TPCN1Q9ULQ1 816 aa16.57■□□□□ 0.24
HMGCL-203ENST00000374490 H7C1W4 665 aa16.56■□□□□ 0.24
HMGCL-203ENST00000374490 TPM2P07951 284 aa16.56■□□□□ 0.24
HMGCL-203ENST00000374490 PIGBQ92521 554 aa16.56■□□□□ 0.24
HMGCL-203ENST00000374490 SBF2Q86WG5 1849 aa16.56■□□□□ 0.24
HMGCL-203ENST00000374490 ST3GAL1Q11201 340 aa16.56■□□□□ 0.24
HMGCL-203ENST00000374490 FOXD4L6Q3SYB3 417 aaPredicted RBP16.56■□□□□ 0.24
HMGCL-203ENST00000374490 FOXD4L3Q6VB84 417 aaPredicted RBP16.56■□□□□ 0.24
HMGCL-203ENST00000374490 SYTL4Q96C24 671 aaPredicted RBP16.56■□□□□ 0.24
HMGCL-203ENST00000374490 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
HMGCL-203ENST00000374490 ZKSCAN5Q9Y2L8 839 aa16.56■□□□□ 0.24
HMGCL-203ENST00000374490 PALLDQ8WX93 1383 aa16.55■□□□□ 0.24
HMGCL-203ENST00000374490 ELP1O95163 1332 aa16.55■□□□□ 0.24
HMGCL-203ENST00000374490 SH3TC1Q8TE82 1336 aa16.55■□□□□ 0.24
HMGCL-203ENST00000374490 FIBPO43427 364 aa16.55■□□□□ 0.24
HMGCL-203ENST00000374490 OFD1O75665 1012 aa16.55■□□□□ 0.24
HMGCL-203ENST00000374490 TERF1P54274 439 aa16.55■□□□□ 0.24
HMGCL-203ENST00000374490 KRT85P78386 507 aa16.55■□□□□ 0.24
HMGCL-203ENST00000374490 LARP1BQ659C4 914 aaKnown RBP16.55■□□□□ 0.24
HMGCL-203ENST00000374490 TEX13AQ9BXU3 409 aaPredicted RBP16.55■□□□□ 0.24
HMGCL-203ENST00000374490 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
HMGCL-203ENST00000374490 CASZ1Q86V15 1759 aa16.54■□□□□ 0.24
HMGCL-203ENST00000374490 VPS37CA5D8V6 355 aaPredicted RBP16.54■□□□□ 0.24
HMGCL-203ENST00000374490 MCMDC2Q4G0Z9 681 aa16.54■□□□□ 0.24
HMGCL-203ENST00000374490 VSIG10Q8N0Z9 540 aa16.54■□□□□ 0.24
HMGCL-203ENST00000374490 FHDC1Q9C0D6 1143 aaPredicted RBP16.54■□□□□ 0.24
HMGCL-203ENST00000374490 ATG3Q9NT62 314 aa16.54■□□□□ 0.24
HMGCL-203ENST00000374490 HMGB1P09429 215 aaKnown RBP16.53■□□□□ 0.24
HMGCL-203ENST00000374490 IL15P40933 162 aaPredicted RBP16.53■□□□□ 0.24
HMGCL-203ENST00000374490 PIP4K2AP48426 406 aaPredicted RBP16.53■□□□□ 0.24
HMGCL-203ENST00000374490 ZNF589Q86UQ0 364 aaPredicted RBP16.53■□□□□ 0.24
HMGCL-203ENST00000374490 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
HMGCL-203ENST00000374490 CCDC191Q8NCU4 936 aa16.53■□□□□ 0.24
HMGCL-203ENST00000374490 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
HMGCL-203ENST00000374490 SYT17Q9BSW7 474 aa16.53■□□□□ 0.24
HMGCL-203ENST00000374490 ASAP1Q9ULH1 1129 aa16.53■□□□□ 0.24
HMGCL-203ENST00000374490 ATP5J2-PTCD1G3V325 749 aa16.52■□□□□ 0.24
HMGCL-203ENST00000374490 CIAO1O76071 339 aa16.52■□□□□ 0.24
HMGCL-203ENST00000374490 DNM1Q05193 864 aaKnown RBP16.52■□□□□ 0.24
HMGCL-203ENST00000374490 TOB2Q14106 344 aaPredicted RBP16.52■□□□□ 0.24
HMGCL-203ENST00000374490 LMBR1LQ6UX01 489 aa16.52■□□□□ 0.24
HMGCL-203ENST00000374490 NECAB1Q8N987 351 aa16.52■□□□□ 0.24
HMGCL-203ENST00000374490 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
HMGCL-203ENST00000374490 NEK1Q96PY6 1258 aa16.52■□□□□ 0.24
HMGCL-203ENST00000374490 DBNDD2Q9BQY9 259 aa16.52■□□□□ 0.24
HMGCL-203ENST00000374490 HELLSQ9NRZ9 838 aa16.52■□□□□ 0.24
HMGCL-203ENST00000374490 ZNF609O15014 1411 aa16.52■□□□□ 0.23
HMGCL-203ENST00000374490 FOXO4P98177 505 aa16.52■□□□□ 0.23
HMGCL-203ENST00000374490 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.23
HMGCL-203ENST00000374490 SCAND2PQ9GZW5 306 aaPredicted RBP16.52■□□□□ 0.23
HMGCL-203ENST00000374490 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms