RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SMARCC2Q8TAQ2 1214 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 WDR66Q8TBY9 1149 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 C8orf76Q96K31 380 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 NAPGQ99747 312 aaPredicted RBP11.68□□□□□ -0.54
CD28-202ENST00000374481 URB2Q14146 1524 aaKnown RBP11.68□□□□□ -0.54
CD28-202ENST00000374481 PPP1R12AO14974 1030 aaPredicted RBP11.68□□□□□ -0.54
CD28-202ENST00000374481 IQCA1Q86XH1 822 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 LEO1Q8WVC0 666 aaPredicted RBP11.68□□□□□ -0.54
CD28-202ENST00000374481 TBC1D31Q96DN5 1066 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 TTC41PQ6P2S7 1318 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 CHMLP26374 656 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 CDC25BP30305 580 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 FAM160A1Q05DH4 1040 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 APOBRQ0VD83 1088 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 TCOF1Q13428 1488 aaKnown RBP11.68□□□□□ -0.54
CD28-202ENST00000374481 PIK3C2GO75747 1445 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 RNF40O75150 1001 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 MLECQ14165 292 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 CCDC6Q16204 474 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 WHAMMP3Q1A5X7 153 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 SAAL1Q96ER3 474 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 MINK1Q8N4C8 1332 aaPredicted RBP11.67□□□□□ -0.54
CD28-202ENST00000374481 DTNBO60941 627 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 GSPT1P15170 499 aaKnown RBP11.67□□□□□ -0.54
CD28-202ENST00000374481 SYKP43405 635 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 VAV2P52735 878 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 SH3GL3Q99963 347 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 TACO1Q9BSH4 297 aaKnown RBP11.67□□□□□ -0.54
CD28-202ENST00000374481 GUCA1BQ9UMX6 200 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 RNF168Q8IYW5 571 aaPredicted RBP11.67□□□□□ -0.54
CD28-202ENST00000374481 SAMM50Q9Y512 469 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 FAM169AQ9Y6X4 670 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
CD28-202ENST00000374481 LACTBP83111 547 aaPredicted RBP11.67□□□□□ -0.54
CD28-202ENST00000374481 MYL5Q02045 173 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 SWAP70Q9UH65 585 aa11.67□□□□□ -0.54
CD28-202ENST00000374481 PHLPP2Q6ZVD8 1323 aa11.66□□□□□ -0.54
CD28-202ENST00000374481 ZNF521Q96K83 1311 aa11.66□□□□□ -0.54
CD28-202ENST00000374481 ABCC5O15440 1437 aa11.66□□□□□ -0.54
CD28-202ENST00000374481 KIF3CO14782 793 aa11.66□□□□□ -0.54
CD28-202ENST00000374481 CPA1P15085 419 aa11.66□□□□□ -0.54
CD28-202ENST00000374481 ELF1P32519 619 aa11.66□□□□□ -0.54
CD28-202ENST00000374481 AACSQ86V21 672 aa11.66□□□□□ -0.54
CD28-202ENST00000374481 HPDP32754 393 aaPredicted RBP11.66□□□□□ -0.54
CD28-202ENST00000374481 CCT2P78371 535 aaKnown RBP11.66□□□□□ -0.54
CD28-202ENST00000374481 PPFIA3O75145 1194 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 HMGB1P09429 215 aaKnown RBP11.65□□□□□ -0.54
CD28-202ENST00000374481 ARID5BQ14865 1188 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 DBN1Q16643 649 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 TTC6Q86TZ1 520 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 KCNG4Q8TDN1 519 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 PIK3R5Q8WYR1 880 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 TESK2Q96S53 571 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 ANKRD18BA2A2Z9 1011 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 N4BP3O15049 544 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 VPS53Q5VIR6 699 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 WWC2Q6AWC2 1192 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 ALS2CR12Q96Q35 445 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 MEIS3Q99687 375 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 WASHC4Q2M389 1173 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 HSP90AB2PQ58FF8 381 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 SND1Q7KZF4 910 aaKnown RBP eCLIP11.65□□□□□ -0.54
CD28-202ENST00000374481 PPP2R2CQ9Y2T4 447 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 RPGRIP1LQ68CZ1 1315 aa11.65□□□□□ -0.54
CD28-202ENST00000374481 NR1I2O75469 434 aa11.65□□□□□ -0.55
CD28-202ENST00000374481 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.55
CD28-202ENST00000374481 FBF1Q8TES7 1133 aa11.65□□□□□ -0.55
CD28-202ENST00000374481 SEC62Q99442 399 aaKnown RBP11.65□□□□□ -0.55
CD28-202ENST00000374481 NSRP1Q9H0G5 558 aaKnown RBP11.65□□□□□ -0.55
CD28-202ENST00000374481 USP27XA6NNY8 438 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 F6X3S4 739 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 SMIM24O75264 130 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 RBM6P78332 1123 aaKnown RBP11.64□□□□□ -0.55
CD28-202ENST00000374481 SRGAP1Q7Z6B7 1085 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 AKR1B15C9JRZ8 316 aaPredicted RBP11.64□□□□□ -0.55
CD28-202ENST00000374481 E7EVH7 732 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 CLSTN1O94985 981 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 GGT6Q6P531 493 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 ZDHHC9Q9Y397 364 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 CUL4AQ13619 759 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 LARP1Q6PKG0 1096 aaKnown RBP11.64□□□□□ -0.55
CD28-202ENST00000374481 MRPL50Q8N5N7 158 aaKnown RBP11.64□□□□□ -0.55
CD28-202ENST00000374481 JPH4Q96JJ6 628 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 ASXL1Q8IXJ9 1541 aa11.64□□□□□ -0.55
CD28-202ENST00000374481 A0A1B0GVL5 298 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 ECM2O94769 699 aaPredicted RBP11.63□□□□□ -0.55
CD28-202ENST00000374481 PPP1R7Q15435 360 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 TMEM132EQ6IEE7 984 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 MIPOL1Q8TD10 442 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 POLR3AO14802 1390 aaPredicted RBP11.63□□□□□ -0.55
CD28-202ENST00000374481 XBP1P17861 261 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 AMPHP49418 695 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 MXRA7P84157 204 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 CASP8Q14790 479 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 TTC19Q6DKK2 380 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms