RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 TRIM17Q9Y577 477 aa16.6■□□□□ 0.25
HDAC8-204ENST00000373560 UBE2Q2LH0YL09 131 aa16.59■□□□□ 0.25
HDAC8-204ENST00000373560 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
HDAC8-204ENST00000373560 SNRPA1P09661 255 aaKnown RBP16.58■□□□□ 0.24
HDAC8-204ENST00000373560 TM4SF4P48230 202 aa16.58■□□□□ 0.24
HDAC8-204ENST00000373560 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
HDAC8-204ENST00000373560 ZNF609O15014 1411 aa16.57■□□□□ 0.24
HDAC8-204ENST00000373560 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
HDAC8-204ENST00000373560 PRAMEF18Q5VWM3 479 aa16.57■□□□□ 0.24
HDAC8-204ENST00000373560 ZBTB3Q9H5J0 574 aa16.57■□□□□ 0.24
HDAC8-204ENST00000373560 ANGEL2Q5VTE6 544 aaKnown RBP16.56■□□□□ 0.24
HDAC8-204ENST00000373560 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
HDAC8-204ENST00000373560 IFNLR1Q8IU57 520 aaPredicted RBP16.56■□□□□ 0.24
HDAC8-204ENST00000373560 SP8Q8IXZ3 490 aa16.56■□□□□ 0.24
HDAC8-204ENST00000373560 CFHR5Q9BXR6 569 aa16.55■□□□□ 0.24
HDAC8-204ENST00000373560 LAMB1P07942 1786 aa16.55■□□□□ 0.24
HDAC8-204ENST00000373560 PSME4Q14997 1843 aa16.54■□□□□ 0.24
HDAC8-204ENST00000373560 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
HDAC8-204ENST00000373560 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
HDAC8-204ENST00000373560 ARMC5Q96C12 935 aa16.54■□□□□ 0.24
HDAC8-204ENST00000373560 ERVV-1B6SEH8 477 aa16.53■□□□□ 0.24
HDAC8-204ENST00000373560 RIMBP2O15034 1052 aa16.53■□□□□ 0.24
HDAC8-204ENST00000373560 DIAPH1O60610 1272 aaKnown RBP16.53■□□□□ 0.24
HDAC8-204ENST00000373560 DOK7Q18PE1 504 aa16.53■□□□□ 0.24
HDAC8-204ENST00000373560 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
HDAC8-204ENST00000373560 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-204ENST00000373560 PTPN22Q9Y2R2 807 aa16.53■□□□□ 0.24
HDAC8-204ENST00000373560 LAMA3Q16787 3333 aa16.53■□□□□ 0.24
HDAC8-204ENST00000373560 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.24
HDAC8-204ENST00000373560 SOX1O00570 391 aaPredicted RBP16.52■□□□□ 0.24
HDAC8-204ENST00000373560 ECE2O60344 883 aa16.52■□□□□ 0.24
HDAC8-204ENST00000373560 FKBP1BP68106 108 aa16.52■□□□□ 0.24
HDAC8-204ENST00000373560 MCM10Q7L590 875 aa16.52■□□□□ 0.24
HDAC8-204ENST00000373560 CD99L2Q8TCZ2 262 aa16.52■□□□□ 0.24
HDAC8-204ENST00000373560 NLRP3Q96P20 1036 aa16.52■□□□□ 0.24
HDAC8-204ENST00000373560 UNC80Q8N2C7 3258 aa16.52■□□□□ 0.23
HDAC8-204ENST00000373560 RPS12P25398 132 aaKnown RBP16.51■□□□□ 0.23
HDAC8-204ENST00000373560 SCARF1Q14162 830 aa16.51■□□□□ 0.23
HDAC8-204ENST00000373560 ZNF646O15015 1829 aaPredicted RBP16.51■□□□□ 0.23
HDAC8-204ENST00000373560 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
HDAC8-204ENST00000373560 BBOX1O75936 387 aa16.49■□□□□ 0.23
HDAC8-204ENST00000373560 HCLS1P14317 486 aaPredicted RBP16.49■□□□□ 0.23
HDAC8-204ENST00000373560 MYL6BP14649 208 aa16.49■□□□□ 0.23
HDAC8-204ENST00000373560 GRAPQ13588 217 aa16.49■□□□□ 0.23
HDAC8-204ENST00000373560 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
HDAC8-204ENST00000373560 GRAPLQ8TC17 118 aaPredicted RBP16.49■□□□□ 0.23
HDAC8-204ENST00000373560 PRO3102Q9H379 93 aa16.49■□□□□ 0.23
HDAC8-204ENST00000373560 RRP7AQ9Y3A4 280 aaKnown RBP16.49■□□□□ 0.23
HDAC8-204ENST00000373560 MYCP01106 439 aaPredicted RBP16.48■□□□□ 0.23
HDAC8-204ENST00000373560 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
HDAC8-204ENST00000373560 SREBF2Q12772 1141 aa16.48■□□□□ 0.23
HDAC8-204ENST00000373560 WASHC4Q2M389 1173 aa16.48■□□□□ 0.23
HDAC8-204ENST00000373560 SLC10A5Q5PT55 438 aa16.48■□□□□ 0.23
HDAC8-204ENST00000373560 KIF6Q6ZMV9 814 aa16.48■□□□□ 0.23
HDAC8-204ENST00000373560 LRCH3Q96II8 777 aa16.48■□□□□ 0.23
HDAC8-204ENST00000373560 ZNF333Q96JL9 665 aa16.48■□□□□ 0.23
HDAC8-204ENST00000373560 POLLQ9UGP5 575 aa16.48■□□□□ 0.23
HDAC8-204ENST00000373560 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
HDAC8-204ENST00000373560 IGF2BP3O00425 579 aaKnown RBP eCLIP16.47■□□□□ 0.23
HDAC8-204ENST00000373560 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
HDAC8-204ENST00000373560 CD44P16070 742 aaKnown RBP16.47■□□□□ 0.23
HDAC8-204ENST00000373560 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
HDAC8-204ENST00000373560 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
HDAC8-204ENST00000373560 PITPNM2Q9BZ72 1349 aa16.46■□□□□ 0.23
HDAC8-204ENST00000373560 VIL1P09327 827 aaKnown RBP16.46■□□□□ 0.23
HDAC8-204ENST00000373560 ZNF280AP59817 542 aaPredicted RBP16.46■□□□□ 0.23
HDAC8-204ENST00000373560 GPSM2P81274 684 aa16.46■□□□□ 0.23
HDAC8-204ENST00000373560 PRKG1Q13976 671 aa16.46■□□□□ 0.23
HDAC8-204ENST00000373560 TTLL12Q14166 644 aaPredicted RBP16.46■□□□□ 0.23
HDAC8-204ENST00000373560 GIGYF2Q6Y7W6 1299 aaKnown RBP16.46■□□□□ 0.23
HDAC8-204ENST00000373560 COL25A1Q9BXS0 654 aaPredicted RBP16.46■□□□□ 0.23
HDAC8-204ENST00000373560 SPRYD7Q5W111 196 aa16.45■□□□□ 0.22
HDAC8-204ENST00000373560 PPP1R42Q7Z4L9 355 aa16.45■□□□□ 0.22
HDAC8-204ENST00000373560 IFNL1Q8IU54 200 aa16.45■□□□□ 0.22
HDAC8-204ENST00000373560 CELF1Q92879 486 aaKnown RBP16.44■□□□□ 0.22
HDAC8-204ENST00000373560 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
HDAC8-204ENST00000373560 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
HDAC8-204ENST00000373560 WTIPA6NIX2 430 aaPredicted RBP16.43■□□□□ 0.22
HDAC8-204ENST00000373560 C19orf67A6NJJ6 358 aa16.43■□□□□ 0.22
HDAC8-204ENST00000373560 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
HDAC8-204ENST00000373560 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
HDAC8-204ENST00000373560 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
HDAC8-204ENST00000373560 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
HDAC8-204ENST00000373560 TMEM106CQ9BVX2 250 aa16.43■□□□□ 0.22
HDAC8-204ENST00000373560 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
HDAC8-204ENST00000373560 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
HDAC8-204ENST00000373560 CRHR2Q13324 411 aa16.42■□□□□ 0.22
HDAC8-204ENST00000373560 NBPF9Q3BBW0 867 aa16.42■□□□□ 0.22
HDAC8-204ENST00000373560 PARP10Q53GL7 1025 aa16.42■□□□□ 0.22
HDAC8-204ENST00000373560 SHISA4Q96DD7 197 aa16.42■□□□□ 0.22
HDAC8-204ENST00000373560 ERO1AQ96HE7 468 aa16.42■□□□□ 0.22
HDAC8-204ENST00000373560 THUMPD2Q9BTF0 503 aaKnown RBP16.42■□□□□ 0.22
HDAC8-204ENST00000373560 TSPYL2Q9H2G4 693 aaPredicted RBP16.42■□□□□ 0.22
HDAC8-204ENST00000373560 EFCC1Q9HA90 598 aa16.42■□□□□ 0.22
HDAC8-204ENST00000373560 MYOZ2Q9NPC6 264 aa16.42■□□□□ 0.22
HDAC8-204ENST00000373560 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
HDAC8-204ENST00000373560 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
HDAC8-204ENST00000373560 GMLQ99445 158 aa16.41■□□□□ 0.22
HDAC8-204ENST00000373560 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
HDAC8-204ENST00000373560 SSC5DA1L4H1 1573 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms