RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 NEBLO76041 1014 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 CRACR2BQ8N4Y2 399 aaPredicted RBP16.25■□□□□ 0.19
LMX1B-202ENST00000373474 CTAGE1Q96RT6 745 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 UBE4AQ14139 1066 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 DNAJC25Q9H1X3 360 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 A0A1W2PP64 1363 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 BLMP54132 1417 aaPredicted RBP16.25■□□□□ 0.19
LMX1B-202ENST00000373474 HSF2BPO75031 334 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 PPFIA3O75145 1194 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
LMX1B-202ENST00000373474 EHBP1Q8NDI1 1231 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 JARID2Q92833 1246 aaPredicted RBP16.24■□□□□ 0.19
LMX1B-202ENST00000373474 MSH6P52701 1360 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 NPC1L1Q9UHC9 1359 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 PDE4BQ07343 736 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 LRRC2Q9BYS8 371 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 KAT14Q9H8E8 782 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 TUBB4AP04350 444 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 SSR1P43307 286 aaKnown RBP16.24■□□□□ 0.19
LMX1B-202ENST00000373474 CCDC96Q2M329 555 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 HOOK3Q86VS8 718 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 ZGPATQ8N5A5 531 aaKnown RBP16.24■□□□□ 0.19
LMX1B-202ENST00000373474 TYRO3Q06418 890 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 AOPEPQ8N6M6 819 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 DDX12PQ92771 950 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 UBA5Q9GZZ9 404 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 NPATQ14207 1427 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 TRAPPC8Q9Y2L5 1435 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 ZBTB43O43298 467 aa16.24■□□□□ 0.19
LMX1B-202ENST00000373474 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 WTAPQ15007 396 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 RUFY3Q7L099 469 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 XAGE3Q8WTP9 111 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 CDC5LQ99459 802 aaKnown RBP16.23■□□□□ 0.19
LMX1B-202ENST00000373474 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 TMOD2Q9NZR1 351 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 TEX14Q8IWB6 1497 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 BMP15O95972 392 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 CHMLP26374 656 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 CUL5Q93034 780 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 FBF1Q8TES7 1133 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 ZBTB7BO15156 539 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-202ENST00000373474 TTC31Q49AM3 519 aaPredicted RBP16.23■□□□□ 0.19
LMX1B-202ENST00000373474 WDR66Q8TBY9 1149 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 TCEANC2Q96MN5 208 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 CREB3L3Q68CJ9 461 aa16.23■□□□□ 0.19
LMX1B-202ENST00000373474 FLT4P35916 1363 aa16.22■□□□□ 0.19
LMX1B-202ENST00000373474 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
LMX1B-202ENST00000373474 CKAP4Q07065 602 aaKnown RBP16.22■□□□□ 0.19
LMX1B-202ENST00000373474 SEPT6Q14141 434 aa16.22■□□□□ 0.19
LMX1B-202ENST00000373474 MAATS1Q7Z4T9 603 aa16.22■□□□□ 0.19
LMX1B-202ENST00000373474 LRRC27Q9C0I9 530 aa16.22■□□□□ 0.19
LMX1B-202ENST00000373474 HMGB2P26583 209 aaKnown RBP16.22■□□□□ 0.19
LMX1B-202ENST00000373474 HLTFQ14527 1009 aaKnown RBP eCLIP16.22■□□□□ 0.19
LMX1B-202ENST00000373474 CCDC40Q4G0X9 1142 aa16.22■□□□□ 0.19
LMX1B-202ENST00000373474 TMTC2Q8N394 836 aa16.22■□□□□ 0.19
LMX1B-202ENST00000373474 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.22■□□□□ 0.19
LMX1B-202ENST00000373474 V9GYY5 206 aaPredicted RBP16.22■□□□□ 0.19
LMX1B-202ENST00000373474 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
LMX1B-202ENST00000373474 RAD50Q92878 1312 aa16.22■□□□□ 0.19
LMX1B-202ENST00000373474 ADGRL2O95490 1459 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 UHRF1BP1LA0JNW5 1464 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 TSPY2A6NKD2 308 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 N4BP3O15049 544 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 IL15P40933 162 aaPredicted RBP16.21■□□□□ 0.19
LMX1B-202ENST00000373474 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 DNA2P51530 1060 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 RRAGBQ5VZM2 374 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 MSL1Q68DK7 614 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 DNAI2Q9GZS0 605 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 UBA7P41226 1012 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 CCDC6Q16204 474 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 EHMT1Q9H9B1 1298 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 PAG1Q9NWQ8 432 aa16.21■□□□□ 0.19
LMX1B-202ENST00000373474 GCC2Q8IWJ2 1684 aa16.21■□□□□ 0.18
LMX1B-202ENST00000373474 ZRANB1Q9UGI0 708 aa16.21■□□□□ 0.18
LMX1B-202ENST00000373474 FSD2A1L4K1 749 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 ARFGAP3Q9NP61 516 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 EXOC1Q9NV70 894 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 RNF123Q5XPI4 1314 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 TUBB4BP68371 445 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 RTN1Q16799 776 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
LMX1B-202ENST00000373474 ASXL2Q76L83 1435 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 TRIM21P19474 475 aaKnown RBP16.2■□□□□ 0.18
LMX1B-202ENST00000373474 CEBPAP49715 358 aaPredicted RBP16.2■□□□□ 0.18
LMX1B-202ENST00000373474 SPTY2D1Q68D10 685 aaPredicted RBP16.2■□□□□ 0.18
LMX1B-202ENST00000373474 TTC12Q9H892 705 aaPredicted RBP16.2■□□□□ 0.18
LMX1B-202ENST00000373474 OPA1O60313 960 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 TRIM47Q96LD4 638 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 CCDC94Q9BW85 323 aaPredicted RBP16.2■□□□□ 0.18
LMX1B-202ENST00000373474 SRRTQ9BXP5 876 aaKnown RBP16.2■□□□□ 0.18
LMX1B-202ENST00000373474 RSPH14Q9UHP6 348 aa16.2■□□□□ 0.18
LMX1B-202ENST00000373474 SYT1P21579 422 aa16.19■□□□□ 0.18
LMX1B-202ENST00000373474 JADE2Q9NQC1 790 aa16.19■□□□□ 0.18
LMX1B-202ENST00000373474 PHACTR3Q96KR7 559 aa16.19■□□□□ 0.18
LMX1B-202ENST00000373474 ADGBQ8N7X0 1667 aa16.19■□□□□ 0.18
LMX1B-202ENST00000373474 CRNKL1Q9BZJ0 848 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms