RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 RFC4P35249 363 aa13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 KRT222Q8N1A0 295 aa13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 TMEM87AQ8NBN3 555 aa13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 RPAP1Q9BWH6 1393 aaPredicted RBP13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 COL5A2P05997 1499 aaPredicted RBP13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 VPS37DQ86XT2 251 aa13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 NIP7Q9Y221 180 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 GNPATO15228 680 aa13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 BEND3Q5T5X7 828 aa13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
RPRD1B-201ENST00000373433 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 GCKRQ14397 625 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 FAM200AQ8TCP9 573 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 GJD4Q96KN9 370 aaPredicted RBP13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 DNAJC2Q99543 621 aaKnown RBP13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 CCDC8Q9H0W5 538 aaPredicted RBP13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 BICC1Q9H694 974 aaKnown RBP13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 NFAT5O94916 1531 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 PNMA6EA0A0J9YXQ4 647 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 FUCA2Q9BTY2 467 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 KCNQ2O43526 872 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 TERF2Q15554 542 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 KIF18AQ8NI77 898 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 TIGD1Q96MW7 591 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 CPA1P15085 419 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 CCDC83Q8IWF9 413 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 RHPN1Q8TCX5 695 aa13.14□□□□□ -0.31
RPRD1B-201ENST00000373433 AK2P54819 239 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 VPS72Q15906 364 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 MAP3K11Q16584 847 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 FERMT3Q86UX7 667 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 NUP62CLQ9H1M0 184 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 RUFY2Q8WXA3 655 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 OSBPL3Q9H4L5 887 aa13.13□□□□□ -0.31
RPRD1B-201ENST00000373433 TYRO3Q06418 890 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 CEP135Q66GS9 1140 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 MARCH10Q8NA82 808 aaPredicted RBP13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 IL25Q9H293 177 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 PAXBP1Q9Y5B6 917 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 OVOS2A0A0G2JMS6 1433 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 ANO6Q4KMQ2 910 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 METTL24Q5JXM2 366 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 SUCLG2Q96I99 432 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 PEAK1Q9H792 1746 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 GJB2P29033 226 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 ZSCAN25Q6NSZ9 544 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 LDHAL6AQ6ZMR3 332 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 CCDC191Q8NCU4 936 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 ST7Q9NRC1 585 aa13.12□□□□□ -0.31
RPRD1B-201ENST00000373433 ZNF772Q68DY9 489 aaPredicted RBP13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 TNMDQ9H2S6 317 aa13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 FAM173BQ6P4H8 233 aa13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 IPO4Q8TEX9 1081 aaKnown RBP13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 CLIP2Q9UDT6 1046 aa13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 ZNF215Q9UL58 517 aaPredicted RBP13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 LIMCH1Q9UPQ0 1083 aa13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 MORC2Q9Y6X9 1032 aaPredicted RBP13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 SLIT3O75094 1523 aa13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 IGHMBP2P38935 993 aaKnown RBP13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 NBPF5PQ86XG9 351 aaPredicted RBP13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 SETDB2Q96T68 719 aa13.11□□□□□ -0.31
RPRD1B-201ENST00000373433 TRIM37O94972 964 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 KMT5BQ4FZB7 885 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 CCDC158Q5M9N0 1113 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 SYCP1Q15431 976 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 ELF2Q15723 593 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 BOLA2Q9H3K6 86 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 CBX8Q9HC52 389 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 TRMT1Q9NXH9 659 aaKnown RBP13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 IRS4O14654 1257 aaPredicted RBP13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 LIG1P18858 919 aa13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
RPRD1B-201ENST00000373433 CLSTN1O94985 981 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 HSPA4P34932 840 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 RUFY3Q7L099 469 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 CACTINQ8WUQ7 758 aaKnown RBP13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 GLRX3O76003 335 aaKnown RBP13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 LTN1O94822 1766 aa13.09□□□□□ -0.31
RPRD1B-201ENST00000373433 LARGE1O95461 756 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms