RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 LRRFIP2Q9Y608 721 aaKnown RBP9.64□□□□□ -0.87
GARNL3-201ENST00000373386 UTYO14607 1347 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 APBB1O00213 710 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 PLEKHO1Q53GL0 409 aaPredicted RBP9.63□□□□□ -0.87
GARNL3-201ENST00000373386 SYAP1Q96A49 352 aaPredicted RBP9.63□□□□□ -0.87
GARNL3-201ENST00000373386 IRAK4Q9NWZ3 460 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 TMEM63CQ9P1W3 806 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 HSPA4P34932 840 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 TERF2Q15554 542 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 CDC37Q16543 378 aaPredicted RBP9.63□□□□□ -0.87
GARNL3-201ENST00000373386 TMX3Q96JJ7 454 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 SYNPO2Q9UMS6 1093 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 EXOC6BQ9Y2D4 811 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 SCN11AQ9UI33 1791 aa9.63□□□□□ -0.87
GARNL3-201ENST00000373386 NAT1P18440 290 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 WDR78Q5VTH9 848 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 CADPS2Q86UW7 1296 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 TRERF1Q96PN7 1200 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 ARPC5LQ9BPX5 153 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 SYCE3A1L190 88 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 SKILP12757 684 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 NEK4P51957 841 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 PUS10Q3MIT2 529 aaKnown RBP9.62□□□□□ -0.87
GARNL3-201ENST00000373386 PI4K2BQ8TCG2 481 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 DNAAF4Q8WXU2 420 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 PARP4Q9UKK3 1724 aaKnown RBP9.62□□□□□ -0.87
GARNL3-201ENST00000373386 COL15A1P39059 1388 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 SMAPO00193 183 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 ATP2B1P20020 1258 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 ERC1Q8IUD2 1116 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 DRC1Q96MC2 740 aa9.62□□□□□ -0.87
GARNL3-201ENST00000373386 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.62□□□□□ -0.87
GARNL3-201ENST00000373386 DBF4Q9UBU7 674 aaPredicted RBP9.62□□□□□ -0.87
GARNL3-201ENST00000373386 ADCY9O60503 1353 aa9.61□□□□□ -0.87
GARNL3-201ENST00000373386 LONRF3Q496Y0 759 aa9.61□□□□□ -0.87
GARNL3-201ENST00000373386 ARHGEF25Q86VW2 580 aa9.61□□□□□ -0.87
GARNL3-201ENST00000373386 KCNB2Q92953 911 aa9.61□□□□□ -0.87
GARNL3-201ENST00000373386 CHCHD3Q9NX63 227 aaKnown RBP9.61□□□□□ -0.87
GARNL3-201ENST00000373386 NPHP4O75161 1426 aaPredicted RBP9.61□□□□□ -0.87
GARNL3-201ENST00000373386 IRX1P78414 480 aaPredicted RBP9.61□□□□□ -0.87
GARNL3-201ENST00000373386 RHPN1Q8TCX5 695 aa9.61□□□□□ -0.87
GARNL3-201ENST00000373386 SNRKQ9NRH2 765 aa9.61□□□□□ -0.87
GARNL3-201ENST00000373386 ETAA1Q9NY74 926 aa9.61□□□□□ -0.87
GARNL3-201ENST00000373386 DCCP43146 1447 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 EIF3JO75822 258 aaKnown RBP9.6□□□□□ -0.87
GARNL3-201ENST00000373386 XPCQ01831 940 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-201ENST00000373386 PPP1R42Q7Z4L9 355 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 CNTROBQ8N137 903 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 TMEM87AQ8NBN3 555 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 LARP6Q9BRS8 491 aaKnown RBP9.6□□□□□ -0.87
GARNL3-201ENST00000373386 TSPY26PQ9H489 355 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 PKD1L3Q7Z443 1732 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 SGSM2O43147 1006 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 HSPA2P54652 639 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 CHAF1AQ13111 956 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-201ENST00000373386 ZNF396Q96N95 335 aaPredicted RBP9.6□□□□□ -0.87
GARNL3-201ENST00000373386 RMI1Q9H9A7 625 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 ZNF232Q9UNY5 417 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 RNMTO43148 476 aaKnown RBP9.6□□□□□ -0.87
GARNL3-201ENST00000373386 KIF4AO95239 1232 aa9.6□□□□□ -0.87
GARNL3-201ENST00000373386 CWC15Q9P013 229 aaKnown RBP9.6□□□□□ -0.87
GARNL3-201ENST00000373386 ERICH4A6NGS2 130 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 PPFIA2O75334 1257 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 GLRX3O76003 335 aaKnown RBP9.59□□□□□ -0.87
GARNL3-201ENST00000373386 MAP2K2P36507 400 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 MAGEA8P43361 318 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 ANKRD13AQ8IZ07 590 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 HYPKQ9NX55 129 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 COL18A1P39060 1754 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 BTBD11A6QL63 1104 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 DZIP3Q86Y13 1208 aaKnown RBP9.59□□□□□ -0.87
GARNL3-201ENST00000373386 ANKRD20A12PQ8NF67 263 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 TM6SF1Q9BZW5 370 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.878e-9■■■■■ 33.7
GARNL3-201ENST00000373386 NSFL1CQ9UNZ2 370 aaKnown RBP9.59□□□□□ -0.87
GARNL3-201ENST00000373386 LAMB4A4D0S4 1761 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 PXDNQ92626 1479 aa9.59□□□□□ -0.87
GARNL3-201ENST00000373386 HIP1O00291 1037 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 U2AF2P26368 475 aaKnown RBP eCLIP9.58□□□□□ -0.88
GARNL3-201ENST00000373386 KSR2Q6VAB6 950 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 RUFY2Q8WXA3 655 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 PHAXQ9H814 394 aaKnown RBP9.58□□□□□ -0.88
GARNL3-201ENST00000373386 SUGT1Q9Y2Z0 365 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 A0A1B0GUL7 405 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 PSME1Q06323 249 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 TEFQ10587 303 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 WDR33Q9C0J8 1336 aaKnown RBP9.58□□□□□ -0.88
GARNL3-201ENST00000373386 SYNRGQ9UMZ2 1314 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 RFX7Q2KHR2 1363 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-201ENST00000373386 SURF6O75683 361 aaKnown RBP9.58□□□□□ -0.88
GARNL3-201ENST00000373386 INHBEP58166 350 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 AP1ARQ63HQ0 302 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 TRIM74Q86UV6 250 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 TRIM73Q86UV7 250 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 MICALL1Q8N3F8 863 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 SNRNP27Q8WVK2 155 aaKnown RBP9.58□□□□□ -0.88
GARNL3-201ENST00000373386 GPATCH3Q96I76 525 aa9.58□□□□□ -0.88
GARNL3-201ENST00000373386 TTC14Q96N46 770 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms