RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 NEMFO60524 1076 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 ATP5DP30049 168 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.28□□□□□ -0.76
CSMD2-205ENST00000373381 TCP11L2Q8N4U5 519 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 VCXQ9H320 206 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 PPANQ9NQ55 473 aaKnown RBP10.28□□□□□ -0.76
CSMD2-205ENST00000373381 RIOK1Q9BRS2 568 aaKnown RBP10.28□□□□□ -0.76
CSMD2-205ENST00000373381 PARP3Q9Y6F1 533 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 SH2D4BQ5SQS7 431 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 IFIT1BQ5T764 474 aaKnown RBP10.28□□□□□ -0.76
CSMD2-205ENST00000373381 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
CSMD2-205ENST00000373381 STX1AQ16623 288 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 SETDB2Q96T68 719 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 NAP1L4Q99733 375 aaKnown RBP10.28□□□□□ -0.76
CSMD2-205ENST00000373381 ZC3H6P61129 1189 aaKnown RBP10.28□□□□□ -0.76
CSMD2-205ENST00000373381 GBP7Q8N8V2 638 aaPredicted RBP10.28□□□□□ -0.76
CSMD2-205ENST00000373381 IFT74Q96LB3 600 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 FAM204AQ9H8W3 233 aa10.28□□□□□ -0.76
CSMD2-205ENST00000373381 GOLGA6CA6NDK9 693 aa10.27□□□□□ -0.76
CSMD2-205ENST00000373381 GOLGA6BA6NDN3 693 aa10.27□□□□□ -0.76
CSMD2-205ENST00000373381 GOLGA6DP0CG33 693 aa10.27□□□□□ -0.76
CSMD2-205ENST00000373381 ITIH3Q06033 890 aa10.27□□□□□ -0.76
CSMD2-205ENST00000373381 GOLGA6AQ9NYA3 693 aa10.27□□□□□ -0.76
CSMD2-205ENST00000373381 TAOK1Q7L7X3 1001 aa10.27□□□□□ -0.76
CSMD2-205ENST00000373381 EVI5LQ96CN4 794 aa10.27□□□□□ -0.76
CSMD2-205ENST00000373381 FAM8A1Q9UBU6 413 aa10.27□□□□□ -0.76
CSMD2-205ENST00000373381 MYO9BQ13459 2157 aa10.27□□□□□ -0.76
CSMD2-205ENST00000373381 BCAR3O75815 825 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 SETDB1Q15047 1291 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 STMN2Q93045 179 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 ECM2O94769 699 aaPredicted RBP10.27□□□□□ -0.77
CSMD2-205ENST00000373381 NOX5Q96PH1 765 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 IRAK4Q9NWZ3 460 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 CYLC1P35663 651 aaPredicted RBP10.27□□□□□ -0.77
CSMD2-205ENST00000373381 OATP04181 439 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 TMEM132EQ6IEE7 984 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 GPR161Q8N6U8 529 aaKnown RBP10.27□□□□□ -0.77
CSMD2-205ENST00000373381 MYOM3Q5VTT5 1437 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 KIF11P52732 1056 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 CCDC183Q5T5S1 534 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 HAUS8Q9BT25 410 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 DACT3Q96B18 629 aaPredicted RBP10.27□□□□□ -0.77
CSMD2-205ENST00000373381 FNBP1Q96RU3 617 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 PRKAG2Q9UGJ0 569 aa10.27□□□□□ -0.77
CSMD2-205ENST00000373381 PFDN6O15212 129 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 PRR16Q569H4 304 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 MTRF1LQ9UGC7 380 aaKnown RBP10.26□□□□□ -0.77
CSMD2-205ENST00000373381 FCHSD2O94868 740 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 PPP1R7Q15435 360 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 CETN3O15182 167 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 TRPC3Q13507 836 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 CALCOCO1Q9P1Z2 691 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 TMEM110-MUSTN1A8MSY1 372 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 CDR2Q01850 454 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 RBM10P98175 930 aaKnown RBP10.26□□□□□ -0.77
CSMD2-205ENST00000373381 SEPT14Q6ZU15 432 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 TMTC2Q8N394 836 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 N4BP3O15049 544 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 MYD88Q99836 296 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 IPO4Q8TEX9 1081 aaKnown RBP10.26□□□□□ -0.77
CSMD2-205ENST00000373381 STRN3Q13033 797 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 RRP36Q96EU6 259 aaKnown RBP10.26□□□□□ -0.77
CSMD2-205ENST00000373381 FRMD4BQ9Y2L6 1034 aa10.26□□□□□ -0.77
CSMD2-205ENST00000373381 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
CSMD2-205ENST00000373381 PSMA7O14818 248 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 SLC4A8Q2Y0W8 1093 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 SPDYE2Q495Y8 402 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 CNNM2Q9H8M5 875 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 CCDC129Q6ZRS4 1044 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 NYXQ9GZU5 481 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 BICDL2A1A5D9 508 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 PDE3AQ14432 1141 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 DIXDC1Q155Q3 683 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 KANK4Q5T7N3 995 aaPredicted RBP10.25□□□□□ -0.77
CSMD2-205ENST00000373381 SEL1L2Q5TEA6 688 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 HVCN1Q96D96 273 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 BOLA2Q9H3K6 86 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 KRT5P13647 590 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 HEATR3Q7Z4Q2 680 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 TYW5A2RUC4 315 aaKnown RBP10.25□□□□□ -0.77
CSMD2-205ENST00000373381 METAP2P50579 478 aaKnown RBP eCLIP10.25□□□□□ -0.77
CSMD2-205ENST00000373381 CUX1P39880 1505 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 PDE6AP16499 860 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 SLC52A1Q9NWF4 448 aa10.25□□□□□ -0.77
CSMD2-205ENST00000373381 ATP2C2O75185 946 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 CHD1LQ86WJ1 897 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 SEPT8Q92599 483 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 TSGA10Q9BZW7 698 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 RPL13P26373 211 aaKnown RBP10.24□□□□□ -0.77
CSMD2-205ENST00000373381 CCDC121Q6ZUS5 278 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 IARSP41252 1262 aaKnown RBP10.24□□□□□ -0.77
CSMD2-205ENST00000373381 NUCB1Q02818 461 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 NCOA7Q8NI08 942 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 VCX3AQ9NNX9 186 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 AK9Q5TCS8 1911 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 ATAD2Q6PL18 1390 aa10.24□□□□□ -0.77
CSMD2-205ENST00000373381 EXOSC9Q06265 439 aaKnown RBP10.24□□□□□ -0.77
CSMD2-205ENST00000373381 PALM3A6NDB9 673 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms