RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 ANKRD44Q8N8A2 993 aa12□□□□□ -0.49
ITM2A-201ENST00000373298 MVPQ14764 893 aaKnown RBP11.99□□□□□ -0.49
ITM2A-201ENST00000373298 TTLL11Q8NHH1 800 aa11.99□□□□□ -0.49
ITM2A-201ENST00000373298 NLRP3Q96P20 1036 aa11.99□□□□□ -0.49
ITM2A-201ENST00000373298 BICC1Q9H694 974 aaKnown RBP11.99□□□□□ -0.49
ITM2A-201ENST00000373298 GREM2Q9H772 168 aa11.99□□□□□ -0.49
ITM2A-201ENST00000373298 LRRFIP2Q9Y608 721 aaKnown RBP11.99□□□□□ -0.49
ITM2A-201ENST00000373298 RIC1Q4ADV7 1423 aa11.98□□□□□ -0.49
ITM2A-201ENST00000373298 SPEF2Q9C093 1822 aa11.98□□□□□ -0.49
ITM2A-201ENST00000373298 PDE8AO60658 829 aa11.98□□□□□ -0.49
ITM2A-201ENST00000373298 PDE6BP35913 854 aa11.98□□□□□ -0.49
ITM2A-201ENST00000373298 PDE3AQ14432 1141 aa11.98□□□□□ -0.49
ITM2A-201ENST00000373298 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
ITM2A-201ENST00000373298 ZNF622Q969S3 477 aaKnown RBP eCLIP11.98□□□□□ -0.49
ITM2A-201ENST00000373298 CRBNQ96SW2 442 aa11.98□□□□□ -0.49
ITM2A-201ENST00000373298 H0YIN7 160 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 CSF1RP07333 972 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 YBX3P16989 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
ITM2A-201ENST00000373298 CTSWP56202 376 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 TGFB2P61812 414 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 SF3B3Q15393 1217 aaKnown RBP11.97□□□□□ -0.49
ITM2A-201ENST00000373298 DCAF8Q5TAQ9 597 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 LMBR1LQ6UX01 489 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 CELF1Q92879 486 aaKnown RBP11.97□□□□□ -0.49
ITM2A-201ENST00000373298 PLA2G12BQ9BX93 195 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 SNPHO15079 494 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 UBTFL1P0CB47 393 aaPredicted RBP11.97□□□□□ -0.49
ITM2A-201ENST00000373298 PYGBP11216 843 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 KLHDC4Q8TBB5 520 aa11.97□□□□□ -0.49
ITM2A-201ENST00000373298 ZNF594Q96JF6 807 aaPredicted RBP11.97□□□□□ -0.49
ITM2A-201ENST00000373298 NPR1P16066 1061 aa11.96□□□□□ -0.5
ITM2A-201ENST00000373298 HOXA10P31260 410 aaPredicted RBP11.96□□□□□ -0.5
ITM2A-201ENST00000373298 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.96□□□□□ -0.5
ITM2A-201ENST00000373298 MASTLQ96GX5 879 aa11.96□□□□□ -0.5
ITM2A-201ENST00000373298 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.5
ITM2A-201ENST00000373298 WTIPA6NIX2 430 aaPredicted RBP11.95□□□□□ -0.5
ITM2A-201ENST00000373298 RABL6Q3YEC7 729 aaPredicted RBP11.95□□□□□ -0.5
ITM2A-201ENST00000373298 PRPF40BQ6NWY9 871 aaKnown RBP11.95□□□□□ -0.5
ITM2A-201ENST00000373298 SPNS2Q8IVW8 549 aa11.95□□□□□ -0.5
ITM2A-201ENST00000373298 RPGRQ92834 1020 aaKnown RBP11.95□□□□□ -0.5
ITM2A-201ENST00000373298 ZBTB40Q9NUA8 1239 aa11.95□□□□□ -0.5
ITM2A-201ENST00000373298 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
ITM2A-201ENST00000373298 CHMP3Q9Y3E7 222 aa11.95□□□□□ -0.5
ITM2A-201ENST00000373298 PNMA6EA0A0J9YXQ4 647 aa11.94□□□□□ -0.5
ITM2A-201ENST00000373298 ITGA6P23229 1130 aa11.94□□□□□ -0.5
ITM2A-201ENST00000373298 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
ITM2A-201ENST00000373298 STYK1Q6J9G0 422 aa11.94□□□□□ -0.5
ITM2A-201ENST00000373298 EXOC6Q8TAG9 804 aa11.94□□□□□ -0.5
ITM2A-201ENST00000373298 C7orf43Q8WVR3 580 aa11.94□□□□□ -0.5
ITM2A-201ENST00000373298 PIM2Q9P1W9 311 aa11.94□□□□□ -0.5
ITM2A-201ENST00000373298 BCS1LQ9Y276 419 aa11.94□□□□□ -0.5
ITM2A-201ENST00000373298 C21orf2O43822 256 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 RFX5P48382 616 aaPredicted RBP11.93□□□□□ -0.5
ITM2A-201ENST00000373298 CCDC152Q4G0S7 254 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 ARFGEF1Q9Y6D6 1849 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 GNAI2P04899 355 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 GNAI3P08754 354 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 MS4A1P11836 297 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 GRAPQ13588 217 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
ITM2A-201ENST00000373298 SIRT2Q8IXJ6 389 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 TTLL6Q8N841 843 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 GRAPLQ8TC17 118 aaPredicted RBP11.93□□□□□ -0.5
ITM2A-201ENST00000373298 RBM17Q96I25 401 aaKnown RBP11.93□□□□□ -0.5
ITM2A-201ENST00000373298 CRAMP1Q96RY5 1269 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 PUS3Q9BZE2 481 aaKnown RBP11.93□□□□□ -0.5
ITM2A-201ENST00000373298 DDX19BQ9UMR2 479 aa11.93□□□□□ -0.5
ITM2A-201ENST00000373298 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
ITM2A-201ENST00000373298 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
ITM2A-201ENST00000373298 RTL9Q8NET4 1388 aa11.92□□□□□ -0.5
ITM2A-201ENST00000373298 SNED1Q8TER0 1413 aa11.91□□□□□ -0.5
ITM2A-201ENST00000373298 RPS8P62241 208 aaKnown RBP11.91□□□□□ -0.5
ITM2A-201ENST00000373298 LRRC24Q50LG9 513 aa11.91□□□□□ -0.5
ITM2A-201ENST00000373298 CEP85Q6P2H3 762 aa11.91□□□□□ -0.5
ITM2A-201ENST00000373298 PCDHB15Q9Y5E8 787 aa11.91□□□□□ -0.5
ITM2A-201ENST00000373298 A0A1B0GUL6 1792 aa11.9□□□□□ -0.5
ITM2A-201ENST00000373298 SNAP23O00161 211 aa11.9□□□□□ -0.5
ITM2A-201ENST00000373298 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
ITM2A-201ENST00000373298 PRELPP51888 382 aa11.9□□□□□ -0.5
ITM2A-201ENST00000373298 PTPN12Q05209 780 aaKnown RBP11.9□□□□□ -0.5
ITM2A-201ENST00000373298 CNKSR1Q969H4 720 aa11.9□□□□□ -0.5
ITM2A-201ENST00000373298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.9□□□□□ -0.5
ITM2A-201ENST00000373298 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.5
ITM2A-201ENST00000373298 FER1L6Q2WGJ9 1857 aa11.9□□□□□ -0.5
ITM2A-201ENST00000373298 DUOX1Q9NRD9 1551 aa11.9□□□□□ -0.5
ITM2A-201ENST00000373298 ANKRD18BA2A2Z9 1011 aa11.89□□□□□ -0.51
ITM2A-201ENST00000373298 SRGAP3O43295 1099 aa11.89□□□□□ -0.51
ITM2A-201ENST00000373298 CENPBP07199 599 aaPredicted RBP11.89□□□□□ -0.51
ITM2A-201ENST00000373298 ALDH1B1P30837 517 aa11.89□□□□□ -0.51
ITM2A-201ENST00000373298 IFIT5Q13325 482 aaKnown RBP11.89□□□□□ -0.51
ITM2A-201ENST00000373298 MTX1Q13505 466 aa11.89□□□□□ -0.51
ITM2A-201ENST00000373298 PDCD7Q8N8D1 485 aaKnown RBP11.89□□□□□ -0.51
ITM2A-201ENST00000373298 GPR101Q96P66 508 aaPredicted RBP11.89□□□□□ -0.51
ITM2A-201ENST00000373298 SIL1Q9H173 461 aa11.89□□□□□ -0.51
ITM2A-201ENST00000373298 PDZRN3Q9UPQ7 1066 aa11.89□□□□□ -0.51
ITM2A-201ENST00000373298 LTBP1Q14766 1721 aa11.89□□□□□ -0.51
ITM2A-201ENST00000373298 NFKBIEO00221 500 aa11.89□□□□□ -0.51
ITM2A-201ENST00000373298 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
ITM2A-201ENST00000373298 GPSM2P81274 684 aa11.89□□□□□ -0.51
ITM2A-201ENST00000373298 ATP8B2P98198 1209 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms