RNA–Protein interactions for RNA: ENST00000372275.5

TMEM254-203, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-203ENST00000372275 GGA3Q9NZ52 723 aa12.21□□□□□ -0.45
TMEM254-203ENST00000372275 TRMT112Q9UI30 125 aaKnown RBP12.21□□□□□ -0.45
TMEM254-203ENST00000372275 NSFL1CQ9UNZ2 370 aaKnown RBP12.21□□□□□ -0.45
TMEM254-203ENST00000372275 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 ECE2O60344 883 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 GPSM2P81274 684 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 GRAPQ13588 217 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 TNIP1Q15025 636 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 DDX46Q7L014 1031 aaKnown RBP12.2□□□□□ -0.46
TMEM254-203ENST00000372275 COPS6Q7L5N1 327 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 GRAPLQ8TC17 118 aaPredicted RBP12.2□□□□□ -0.46
TMEM254-203ENST00000372275 HHIPL1Q96JK4 782 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 CSRNP1Q96S65 589 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 POLLQ9UGP5 575 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 TSPYL4Q9UJ04 414 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 PAPPA2Q9BXP8 1791 aa12.2□□□□□ -0.46
TMEM254-203ENST00000372275 ATP5J2-PTCD1G3V325 749 aa12.19□□□□□ -0.46
TMEM254-203ENST00000372275 RGL2O15211 777 aa12.19□□□□□ -0.46
TMEM254-203ENST00000372275 TBC1D8O95759 1140 aa12.19□□□□□ -0.46
TMEM254-203ENST00000372275 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
TMEM254-203ENST00000372275 KIF4BQ2VIQ3 1234 aa12.19□□□□□ -0.46
TMEM254-203ENST00000372275 PARP10Q53GL7 1025 aa12.19□□□□□ -0.46
TMEM254-203ENST00000372275 C2orf69Q8N8R5 385 aa12.19□□□□□ -0.46
TMEM254-203ENST00000372275 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
TMEM254-203ENST00000372275 CDCA5Q96FF9 252 aa12.19□□□□□ -0.46
TMEM254-203ENST00000372275 CCDC85AQ96PX6 553 aaPredicted RBP12.19□□□□□ -0.46
TMEM254-203ENST00000372275 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
TMEM254-203ENST00000372275 MKI67P46013 3256 aaKnown RBP12.19□□□□□ -0.46
TMEM254-203ENST00000372275 CENPFP49454 3210 aa12.18□□□□□ -0.46
TMEM254-203ENST00000372275 HTATSF1O43719 755 aaKnown RBP12.18□□□□□ -0.46
TMEM254-203ENST00000372275 SLC10A3P09131 477 aa12.18□□□□□ -0.46
TMEM254-203ENST00000372275 WASHC4Q2M389 1173 aa12.18□□□□□ -0.46
TMEM254-203ENST00000372275 SLC10A5Q5PT55 438 aa12.18□□□□□ -0.46
TMEM254-203ENST00000372275 RASAL3Q86YV0 1011 aa12.18□□□□□ -0.46
TMEM254-203ENST00000372275 DCPSQ96C86 337 aaKnown RBP12.18□□□□□ -0.46
TMEM254-203ENST00000372275 FAM89AQ96GI7 184 aa12.18□□□□□ -0.46
TMEM254-203ENST00000372275 PLEKHF1Q96S99 279 aa12.18□□□□□ -0.46
TMEM254-203ENST00000372275 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
TMEM254-203ENST00000372275 BBOX1O75936 387 aa12.17□□□□□ -0.46
TMEM254-203ENST00000372275 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
TMEM254-203ENST00000372275 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
TMEM254-203ENST00000372275 ANGEL2Q5VTE6 544 aaKnown RBP12.17□□□□□ -0.46
TMEM254-203ENST00000372275 ZC3H15Q8WU90 426 aaKnown RBP12.17□□□□□ -0.46
TMEM254-203ENST00000372275 MXD3Q9BW11 206 aa12.17□□□□□ -0.46
TMEM254-203ENST00000372275 FZD1Q9UP38 647 aa12.17□□□□□ -0.46
TMEM254-203ENST00000372275 SH3TC1Q8TE82 1336 aa12.16□□□□□ -0.46
TMEM254-203ENST00000372275 CDHR2Q9BYE9 1310 aa12.16□□□□□ -0.46
TMEM254-203ENST00000372275 WTIPA6NIX2 430 aaPredicted RBP12.16□□□□□ -0.46
TMEM254-203ENST00000372275 PRKG1Q13976 671 aa12.16□□□□□ -0.46
TMEM254-203ENST00000372275 CTU1Q7Z7A3 348 aaKnown RBP12.16□□□□□ -0.46
TMEM254-203ENST00000372275 R3HDMLQ9H3Y0 253 aa12.16□□□□□ -0.46
TMEM254-203ENST00000372275 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
TMEM254-203ENST00000372275 LAS1LQ9Y4W2 734 aaKnown RBP12.16□□□□□ -0.46
TMEM254-203ENST00000372275 MYH3P11055 1940 aa12.15□□□□□ -0.46
TMEM254-203ENST00000372275 UBE2Q2LH0YL09 131 aa12.15□□□□□ -0.46
TMEM254-203ENST00000372275 NEUROD2Q15784 382 aa12.15□□□□□ -0.46
TMEM254-203ENST00000372275 PRPF38BQ5VTL8 546 aaKnown RBP12.15□□□□□ -0.46
TMEM254-203ENST00000372275 PNISRQ8TF01 805 aaKnown RBP12.15□□□□□ -0.46
TMEM254-203ENST00000372275 ZNF296Q8WUU4 475 aaPredicted RBP12.15□□□□□ -0.46
TMEM254-203ENST00000372275 CHPF2Q9P2E5 772 aa12.15□□□□□ -0.46
TMEM254-203ENST00000372275 ZSWIM8A7E2V4 1837 aa12.15□□□□□ -0.46
TMEM254-203ENST00000372275 BRCA2P51587 3418 aa12.15□□□□□ -0.46
TMEM254-203ENST00000372275 MAPK8IP3Q9UPT6 1336 aa12.14□□□□□ -0.47
TMEM254-203ENST00000372275 TCIRG1Q13488 830 aa12.14□□□□□ -0.47
TMEM254-203ENST00000372275 SCARF1Q14162 830 aa12.14□□□□□ -0.47
TMEM254-203ENST00000372275 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
TMEM254-203ENST00000372275 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
TMEM254-203ENST00000372275 TBC1D16Q8TBP0 767 aa12.14□□□□□ -0.47
TMEM254-203ENST00000372275 VPS33BQ9H267 617 aa12.14□□□□□ -0.47
TMEM254-203ENST00000372275 SAGE1Q9NXZ1 904 aa12.14□□□□□ -0.47
TMEM254-203ENST00000372275 HTTP42858 3142 aa12.13□□□□□ -0.47
TMEM254-203ENST00000372275 UFL1O94874 794 aa12.13□□□□□ -0.47
TMEM254-203ENST00000372275 NEFMP07197 916 aa12.13□□□□□ -0.47
TMEM254-203ENST00000372275 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
TMEM254-203ENST00000372275 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
TMEM254-203ENST00000372275 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
TMEM254-203ENST00000372275 ERBB4Q15303 1308 aa12.12□□□□□ -0.47
TMEM254-203ENST00000372275 RIPK4P57078 832 aa12.12□□□□□ -0.47
TMEM254-203ENST00000372275 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
TMEM254-203ENST00000372275 DPF2Q92785 391 aa12.12□□□□□ -0.47
TMEM254-203ENST00000372275 G3V3G9 751 aa12.11□□□□□ -0.47
TMEM254-203ENST00000372275 NBPF9Q3BBW0 867 aa12.11□□□□□ -0.47
TMEM254-203ENST00000372275 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
TMEM254-203ENST00000372275 OTOFQ9HC10 1997 aa12.1□□□□□ -0.47
TMEM254-203ENST00000372275 ECM29Q5VYK3 1845 aa12.1□□□□□ -0.47
TMEM254-203ENST00000372275 POTEFA5A3E0 1075 aa12.1□□□□□ -0.47
TMEM254-203ENST00000372275 SASH1O94885 1247 aa12.1□□□□□ -0.47
TMEM254-203ENST00000372275 HSP90AB3PQ58FF7 597 aa12.1□□□□□ -0.47
TMEM254-203ENST00000372275 ANKIB1Q9P2G1 1089 aa12.1□□□□□ -0.47
TMEM254-203ENST00000372275 IRS4O14654 1257 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-203ENST00000372275 VIL1P09327 827 aaKnown RBP12.09□□□□□ -0.47
TMEM254-203ENST00000372275 RSBN1LQ6PCB5 846 aaPredicted RBP12.09□□□□□ -0.47
TMEM254-203ENST00000372275 ISCA1Q9BUE6 129 aa12.09□□□□□ -0.47
TMEM254-203ENST00000372275 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
TMEM254-203ENST00000372275 MYOZ2Q9NPC6 264 aa12.09□□□□□ -0.47
TMEM254-203ENST00000372275 A0A1B0GUL6 1792 aa12.09□□□□□ -0.47
TMEM254-203ENST00000372275 RBBP6Q7Z6E9 1792 aaKnown RBP12.09□□□□□ -0.47
TMEM254-203ENST00000372275 RPS12P25398 132 aaKnown RBP12.08□□□□□ -0.48
TMEM254-203ENST00000372275 RPS8P62241 208 aaKnown RBP12.08□□□□□ -0.48
TMEM254-203ENST00000372275 SF3B3Q15393 1217 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms