RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 BMP2KQ9NSY1 1161 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-203ENST00000372232 RGPD8O14715 1765 aaPredicted RBP10.48□□□□□ -0.73
ATG4A-203ENST00000372232 PIK3C2AO00443 1686 aa10.48□□□□□ -0.73
ATG4A-203ENST00000372232 FOXO3O43524 673 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 GSCP56915 257 aaPredicted RBP10.47□□□□□ -0.73
ATG4A-203ENST00000372232 WASHC4Q2M389 1173 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 SYT10Q6XYQ8 523 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 TBC1D9Q6ZT07 1266 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 CHD1LQ86WJ1 897 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 TXLNBQ8N3L3 684 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 RNF217Q8TC41 542 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 KIF2CQ99661 725 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 CXorf56Q9H5V9 222 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 ZMIZ1Q9ULJ6 1067 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 KIF24Q5T7B8 1368 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 TMEM164Q5U3C3 297 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 FAM184AQ8NB25 1140 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 GCC1Q96CN9 775 aa10.47□□□□□ -0.73
ATG4A-203ENST00000372232 CCDC189A1A4V9 331 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 TPM3P06753 285 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 TCF3P15923 654 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 ATP2B1P20020 1258 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 NUTM2GQ5VZR2 741 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 SIRT2Q8IXJ6 389 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 C10orf67Q8IYJ2 551 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 GOLGA6L1Q8N7Z2 621 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 ABTB2Q8N961 1025 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 EPS8L1Q8TE68 723 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 GIPC2Q8TF65 315 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 RTF1Q92541 710 aaKnown RBP10.46□□□□□ -0.73
ATG4A-203ENST00000372232 LNPKQ9C0E8 428 aa10.46□□□□□ -0.73
ATG4A-203ENST00000372232 CD2BP2O95400 341 aaKnown RBP10.46□□□□□ -0.74
ATG4A-203ENST00000372232 MBD3O95983 291 aa10.46□□□□□ -0.74
ATG4A-203ENST00000372232 HOXC9P31274 260 aa10.46□□□□□ -0.74
ATG4A-203ENST00000372232 RBM6P78332 1123 aaKnown RBP10.46□□□□□ -0.74
ATG4A-203ENST00000372232 SEMA3FQ13275 785 aa10.46□□□□□ -0.74
ATG4A-203ENST00000372232 SLFNL1Q499Z3 407 aa10.46□□□□□ -0.74
ATG4A-203ENST00000372232 KMT5BQ4FZB7 885 aa10.46□□□□□ -0.74
ATG4A-203ENST00000372232 INTS3Q68E01 1043 aaKnown RBP10.46□□□□□ -0.74
ATG4A-203ENST00000372232 CCDC91Q7Z6B0 441 aa10.46□□□□□ -0.74
ATG4A-203ENST00000372232 FMN2Q9NZ56 1722 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 A0A1B0GUL7 405 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 TDO2P48775 406 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 SGSM3Q96HU1 749 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 ST7Q9NRC1 585 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 TOMM22Q9NS69 142 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 MIS18AQ9NYP9 233 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 PRPF40AO75400 957 aaKnown RBP10.45□□□□□ -0.74
ATG4A-203ENST00000372232 FXR2P51116 673 aaKnown RBP eCLIP10.45□□□□□ -0.74
ATG4A-203ENST00000372232 CTDSPL2Q05D32 466 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 TUSC1Q2TAM9 212 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 SWT1Q5T5J6 900 aaKnown RBP10.45□□□□□ -0.74
ATG4A-203ENST00000372232 RBM28Q9NW13 759 aaKnown RBP10.45□□□□□ -0.74
ATG4A-203ENST00000372232 SUFUQ9UMX1 484 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 RGS12O14924 1447 aa10.45□□□□□ -0.74
ATG4A-203ENST00000372232 PTPRCP08575 1304 aa10.44□□□□□ -0.74
ATG4A-203ENST00000372232 HTATSF1O43719 755 aaKnown RBP10.44□□□□□ -0.74
ATG4A-203ENST00000372232 CD46P15529 392 aa10.44□□□□□ -0.74
ATG4A-203ENST00000372232 ANKRD45Q5TZF3 282 aa10.44□□□□□ -0.74
ATG4A-203ENST00000372232 SLAIN1Q8ND83 568 aa10.44□□□□□ -0.74
ATG4A-203ENST00000372232 TIE1P35590 1138 aa10.44□□□□□ -0.74
ATG4A-203ENST00000372232 DRC1Q96MC2 740 aa10.44□□□□□ -0.74
ATG4A-203ENST00000372232 TSPYL4Q9UJ04 414 aa10.44□□□□□ -0.74
ATG4A-203ENST00000372232 PYCARDQ9ULZ3 195 aa10.44□□□□□ -0.74
ATG4A-203ENST00000372232 PAXBP1Q9Y5B6 917 aa10.44□□□□□ -0.74
ATG4A-203ENST00000372232 ADCY5O95622 1261 aa10.43□□□□□ -0.74
ATG4A-203ENST00000372232 SCNN1AP37088 669 aa10.43□□□□□ -0.74
ATG4A-203ENST00000372232 NBPF11Q86T75 865 aa10.43□□□□□ -0.74
ATG4A-203ENST00000372232 SRLQ86TD4 932 aa10.43□□□□□ -0.74
ATG4A-203ENST00000372232 NUTM1Q86Y26 1132 aa10.43□□□□□ -0.74
ATG4A-203ENST00000372232 KCNF1Q9H3M0 494 aa10.43□□□□□ -0.74
ATG4A-203ENST00000372232 LCMT1Q9UIC8 334 aa10.43□□□□□ -0.74
ATG4A-203ENST00000372232 NBPF9Q3BBW0 867 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 SUGP1Q8IWZ8 645 aaKnown RBP10.42□□□□□ -0.74
ATG4A-203ENST00000372232 EPAS1Q99814 870 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 DEF6Q9H4E7 631 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 AK9Q5TCS8 1911 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 GNAT3A8MTJ3 354 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 NAA30Q147X3 362 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-203ENST00000372232 TTC31Q49AM3 519 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-203ENST00000372232 DNAJC21Q5F1R6 531 aaKnown RBP10.42□□□□□ -0.74
ATG4A-203ENST00000372232 BMP2KLQ5H9B9 411 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 NBPF10Q6P3W6 841 aaKnown RBP10.42□□□□□ -0.74
ATG4A-203ENST00000372232 KRBA2Q6ZNG9 492 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 MPNDQ8N594 471 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 LRRN4Q8WUT4 740 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 CWC15Q9P013 229 aaKnown RBP10.42□□□□□ -0.74
ATG4A-203ENST00000372232 SLAIN2Q9P270 581 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 USP25Q9UHP3 1055 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 PLEKHG2Q9H7P9 1386 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 USP54Q70EL1 1684 aa10.42□□□□□ -0.74
ATG4A-203ENST00000372232 MARF1Q9Y4F3 1742 aaKnown RBP10.42□□□□□ -0.74
ATG4A-203ENST00000372232 NPHP4O75161 1426 aaPredicted RBP10.42□□□□□ -0.74
ATG4A-203ENST00000372232 NWD1Q149M9 1564 aa10.41□□□□□ -0.74
ATG4A-203ENST00000372232 SERPINB4P48594 390 aa10.41□□□□□ -0.74
ATG4A-203ENST00000372232 BMS1Q14692 1282 aaKnown RBP10.41□□□□□ -0.74
ATG4A-203ENST00000372232 TEX35Q5T0J7 233 aa10.41□□□□□ -0.74
ATG4A-203ENST00000372232 NSFL1CQ9UNZ2 370 aaKnown RBP10.41□□□□□ -0.74
ATG4A-203ENST00000372232 CHD2O14647 1828 aaKnown RBP10.41□□□□□ -0.74
ATG4A-203ENST00000372232 RTL1A6NKG5 1358 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms