RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
TTC39A-204ENST00000371750 CIAO1O76071 339 aa16.21■□□□□ 0.18
TTC39A-204ENST00000371750 BSDC1Q9NW68 430 aaPredicted RBP16.21■□□□□ 0.18
TTC39A-204ENST00000371750 G3BP1Q13283 466 aaKnown RBP eCLIP16.2■□□□□ 0.18
TTC39A-204ENST00000371750 RIPOR2Q9Y4F9 1068 aa16.2■□□□□ 0.18
TTC39A-204ENST00000371750 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 SMC5Q8IY18 1101 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 SYT17Q9BSW7 474 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.19■□□□□ 0.18
TTC39A-204ENST00000371750 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 BBOX1O75936 387 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 SASH1O94885 1247 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 IL15P40933 162 aaPredicted RBP16.19■□□□□ 0.18
TTC39A-204ENST00000371750 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 GCC1Q96CN9 775 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
TTC39A-204ENST00000371750 ARFGEF1Q9Y6D6 1849 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 ARAP2Q8WZ64 1704 aa16.19■□□□□ 0.18
TTC39A-204ENST00000371750 CHRNDQ07001 517 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 HSP90AB4PQ58FF6 505 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 METTL24Q5JXM2 366 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 MINPP1Q9UNW1 487 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 ZNF609O15014 1411 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 MROH5Q6ZUA9 1318 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 TFCP2Q12800 502 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 CENPQQ7L2Z9 268 aaPredicted RBP16.18■□□□□ 0.18
TTC39A-204ENST00000371750 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 VGLL2Q8N8G2 317 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 HELBQ8NG08 1087 aaPredicted RBP16.18■□□□□ 0.18
TTC39A-204ENST00000371750 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
TTC39A-204ENST00000371750 SNED1Q8TER0 1413 aa16.17■□□□□ 0.18
TTC39A-204ENST00000371750 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
TTC39A-204ENST00000371750 SMARCA5O60264 1052 aaPredicted RBP16.17■□□□□ 0.18
TTC39A-204ENST00000371750 ERC1Q8IUD2 1116 aa16.17■□□□□ 0.18
TTC39A-204ENST00000371750 RHPN1Q8TCX5 695 aa16.17■□□□□ 0.18
TTC39A-204ENST00000371750 RAB11FIP3O75154 756 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 TAF5LO75529 589 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 DALRD3Q5D0E6 543 aaKnown RBP16.16■□□□□ 0.18
TTC39A-204ENST00000371750 KIF1BPQ96EK5 621 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 IL1RAPL2Q9NP60 686 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 C21orf2O43822 256 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 GPSM2P81274 684 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 SP8Q8IXZ3 490 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 LRRCC1Q9C099 1032 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 BCL11AQ9H165 835 aa16.16■□□□□ 0.18
TTC39A-204ENST00000371750 CEP126Q9P2H0 1117 aa16.15■□□□□ 0.18
TTC39A-204ENST00000371750 BCS1LQ9Y276 419 aa16.15■□□□□ 0.18
TTC39A-204ENST00000371750 SNAP23O00161 211 aa16.14■□□□□ 0.17
TTC39A-204ENST00000371750 ANKRD45Q5TZF3 282 aa16.14■□□□□ 0.17
TTC39A-204ENST00000371750 XDHP47989 1333 aa16.14■□□□□ 0.17
TTC39A-204ENST00000371750 WTIPA6NIX2 430 aaPredicted RBP16.14■□□□□ 0.17
TTC39A-204ENST00000371750 PDE8BO95263 885 aa16.14■□□□□ 0.17
TTC39A-204ENST00000371750 ANKIB1Q9P2G1 1089 aa16.14■□□□□ 0.17
TTC39A-204ENST00000371750 FER1L6Q2WGJ9 1857 aa16.13■□□□□ 0.17
TTC39A-204ENST00000371750 TNNI3KQ59H18 835 aa16.13■□□□□ 0.17
TTC39A-204ENST00000371750 ANKRD2Q9GZV1 360 aa16.13■□□□□ 0.17
TTC39A-204ENST00000371750 NSFL1CQ9UNZ2 370 aaKnown RBP16.13■□□□□ 0.17
TTC39A-204ENST00000371750 FPGT-TNNI3KV9GXZ4 949 aa16.13■□□□□ 0.17
TTC39A-204ENST00000371750 NUCB1Q02818 461 aa16.12■□□□□ 0.17
TTC39A-204ENST00000371750 PUM3Q15397 648 aaKnown RBP16.12■□□□□ 0.17
TTC39A-204ENST00000371750 LNPKQ9C0E8 428 aa16.12■□□□□ 0.17
TTC39A-204ENST00000371750 ATP2B3Q16720 1220 aa16.12■□□□□ 0.17
TTC39A-204ENST00000371750 CCDC93Q567U6 631 aa16.12■□□□□ 0.17
TTC39A-204ENST00000371750 GPR101Q96P66 508 aaPredicted RBP16.12■□□□□ 0.17
TTC39A-204ENST00000371750 TMX4Q9H1E5 349 aaPredicted RBP16.12■□□□□ 0.17
TTC39A-204ENST00000371750 TLR7Q9NYK1 1049 aaKnown RBP16.12■□□□□ 0.17
TTC39A-204ENST00000371750 UFL1O94874 794 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 FGFR2P21802 821 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 DPP8Q6V1X1 898 aaPredicted RBP16.11■□□□□ 0.17
TTC39A-204ENST00000371750 AACSQ86V21 672 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 CHD1LQ86WJ1 897 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 MPNDQ8N594 471 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 EAF2Q96CJ1 260 aaPredicted RBP16.11■□□□□ 0.17
TTC39A-204ENST00000371750 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 A0A1B0GUL7 405 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 KLRK1P26718 216 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 KCNJ4P48050 445 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 SKAP1Q86WV1 359 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 CLASRPQ8N2M8 674 aaKnown RBP16.11■□□□□ 0.17
TTC39A-204ENST00000371750 GPR108Q9NPR9 543 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 GGA1Q9UJY5 639 aa16.11■□□□□ 0.17
TTC39A-204ENST00000371750 ZNF804BA4D1E1 1349 aa16.1■□□□□ 0.17
TTC39A-204ENST00000371750 ADORA1P30542 326 aa16.1■□□□□ 0.17
TTC39A-204ENST00000371750 CC2D2BQ6DHV5 1058 aa16.1■□□□□ 0.17
TTC39A-204ENST00000371750 TBC1D16Q8TBP0 767 aa16.1■□□□□ 0.17
TTC39A-204ENST00000371750 OTUD7AQ8TE49 926 aaPredicted RBP16.1■□□□□ 0.17
TTC39A-204ENST00000371750 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
TTC39A-204ENST00000371750 POLLQ9UGP5 575 aa16.1■□□□□ 0.17
TTC39A-204ENST00000371750 ATP2B4P23634 1241 aa16.09■□□□□ 0.17
TTC39A-204ENST00000371750 TIMM10P62072 90 aa16.09■□□□□ 0.17
TTC39A-204ENST00000371750 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
TTC39A-204ENST00000371750 LPIN2Q92539 896 aa16.09■□□□□ 0.17
TTC39A-204ENST00000371750 CCDC8Q9H0W5 538 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-204ENST00000371750 AKAP2Q9Y2D5 859 aa16.09■□□□□ 0.17
TTC39A-204ENST00000371750 SLC5A1P13866 664 aa16.09■□□□□ 0.17
TTC39A-204ENST00000371750 YBX3P16989 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
TTC39A-204ENST00000371750 UBE4AQ14139 1066 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms