RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 LEO1Q8WVC0 666 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 HSD3B7Q9H2F3 369 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 TNMDQ9H2S6 317 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 SUGCTQ9HAC7 445 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
SMARCA1-203ENST00000371123 TFRCP02786 760 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 ADD1P35611 737 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 SNW1Q13573 536 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 TAF7Q15545 349 aaPredicted RBP10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 KAT2BQ92831 832 aa10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 TNRQ92752 1358 aa10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 GNAI2P04899 355 aa10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 IQUBQ8NA54 791 aa10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 MRFAP1L1Q96HT8 127 aa10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 XIRP1Q702N8 1843 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 BECN2A8MW95 431 aa10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 FSD1Q9BTV5 496 aa10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 LRRCC1Q9C099 1032 aa10.23□□□□□ -0.77
SMARCA1-203ENST00000371123 STRCP1A6NGW2 1772 aa10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 NCAPGQ9BPX3 1015 aa10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 TSPYL1Q9H0U9 437 aa10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 ELP1O95163 1332 aa10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 SMC1AQ14683 1233 aaKnown RBP10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 LARP1Q6PKG0 1096 aaKnown RBP10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 KLHDC4Q8TBB5 520 aa10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 CPSF1Q10570 1443 aaKnown RBP10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 APPP05067 770 aa10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 CCDC82Q8N4S0 544 aa10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 JRKLQ9Y4A0 524 aa10.22□□□□□ -0.77
SMARCA1-203ENST00000371123 A0A0U1RQJ8 604 aa10.21□□□□□ -0.77
SMARCA1-203ENST00000371123 ATRIPQ8WXE1 791 aa10.21□□□□□ -0.77
SMARCA1-203ENST00000371123 NLRP2Q9NX02 1062 aa10.21□□□□□ -0.77
SMARCA1-203ENST00000371123 PES1O00541 588 aaKnown RBP10.21□□□□□ -0.78
SMARCA1-203ENST00000371123 CHST3Q7LGC8 479 aa10.21□□□□□ -0.78
SMARCA1-203ENST00000371123 RIC3Q7Z5B4 369 aa10.21□□□□□ -0.78
SMARCA1-203ENST00000371123 CARD6Q9BX69 1037 aa10.21□□□□□ -0.78
SMARCA1-203ENST00000371123 ZSCAN16Q9H4T2 348 aaPredicted RBP10.21□□□□□ -0.78
SMARCA1-203ENST00000371123 PHAXQ9H814 394 aaKnown RBP10.21□□□□□ -0.78
SMARCA1-203ENST00000371123 PSME1Q06323 249 aa10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 WWC2Q6AWC2 1192 aa10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 TXLNBQ8N3L3 684 aa10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 WDR24Q96S15 920 aa10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 GSCP56915 257 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 AACSQ86V21 672 aa10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 AKAP2Q9Y2D5 859 aa10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 MAP2K7O14733 419 aa10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 RSRC2Q7L4I2 434 aaKnown RBP10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 TMEM139Q8IV31 216 aa10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 OSBPL5Q9H0X9 879 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-203ENST00000371123 N4BP2Q86UW6 1770 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 EIF3CLB5ME19 914 aaKnown RBP10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 ESCO1Q5FWF5 840 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 CLIC6Q96NY7 704 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 EIF3CQ99613 913 aaKnown RBP10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 CCDC189A1A4V9 331 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 JAK2O60674 1132 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 ZKSCAN1P17029 563 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 CCT2P78371 535 aaKnown RBP10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 G3BP1Q13283 466 aaKnown RBP eCLIP10.19□□□□□ -0.782e-8■■□□□ 12.5
SMARCA1-203ENST00000371123 HSP90AB3PQ58FF7 597 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 LARP1BQ659C4 914 aaKnown RBP10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 KCNV1Q6PIU1 500 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 LRRC31Q6UY01 552 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 GOLGA5Q8TBA6 731 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 KCNB2Q92953 911 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 ZSWIM6Q9HCJ5 1215 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 ATP7BP35670 1465 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 GOLGA6L19H0YKK7 550 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 BIN1O00499 593 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 TOB2Q14106 344 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 DPF2Q92785 391 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 PARD6BQ9BYG5 372 aa10.19□□□□□ -0.78
SMARCA1-203ENST00000371123 FAM208AQ9UK61 1670 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 CPS1P31327 1500 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 VWA3AA6NCI4 1184 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 ATP5J2-PTCD1G3V325 749 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 PTCD1O75127 700 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 SLC39A6Q13433 755 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 GPATCH11Q8N954 259 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 ENGASEQ8NFI3 743 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 EDC3Q96F86 508 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 SNRKQ9NRH2 765 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 ABCC6O95255 1503 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 NPHP4O75161 1426 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 CRB1P82279 1406 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 PI4KAP2A4QPH2 592 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 CHL1O00533 1208 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 LMAN1P49257 510 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 ILDR1Q86SU0 546 aaPredicted RBP10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 CLASRPQ8N2M8 674 aaKnown RBP10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 PI4KAP1Q8N8J0 262 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 FAM212AQ96EL1 285 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 DNAI1Q9UI46 699 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 ACTN2P35609 894 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 RESTQ13127 1097 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 NCAPHQ15003 741 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 WASHC4Q2M389 1173 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 DLC1Q96QB1 1528 aa10.18□□□□□ -0.78
SMARCA1-203ENST00000371123 LTBP4Q8N2S1 1624 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms