RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 MCTP2Q6DN12 878 aa10.95□□□□□ -0.66
HMGCLL1-204ENST00000370852 GPR161Q8N6U8 529 aaKnown RBP10.95□□□□□ -0.66
HMGCLL1-204ENST00000370852 FAM227BQ96M60 508 aa10.95□□□□□ -0.66
HMGCLL1-204ENST00000370852 SRRTQ9BXP5 876 aaKnown RBP10.95□□□□□ -0.66
HMGCLL1-204ENST00000370852 PUF60Q9UHX1 559 aaKnown RBP10.95□□□□□ -0.66
HMGCLL1-204ENST00000370852 MAP2P11137 1827 aaKnown RBP10.95□□□□□ -0.66
HMGCLL1-204ENST00000370852 SOS1Q07889 1333 aaPredicted RBP10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 FOXO3O43524 673 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 LIG3P49916 1009 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 GNG11P61952 73 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 CREB3L3Q68CJ9 461 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 SIL1Q9H173 461 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 RBM8AQ9Y5S9 174 aaKnown RBP10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 ARHGEF28Q8N1W1 1705 aaKnown RBP10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 A0A1B0GVL5 298 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 MAP3K9P80192 1104 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 GUCY1B3Q02153 619 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 KARSQ15046 597 aaKnown RBP10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 NECTIN1Q15223 517 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 NME9Q86XW9 330 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 PPM1EQ8WY54 764 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 CARD10Q9BWT7 1032 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 ANKZF1Q9H8Y5 726 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
HMGCLL1-204ENST00000370852 CDC42BPGQ6DT37 1551 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 TTC41PQ6P2S7 1318 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 BEND6Q5SZJ8 279 aaPredicted RBP10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 KCNV1Q6PIU1 500 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 MMS22LQ6ZRQ5 1243 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 TOGARAM2Q6ZUX3 1019 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 CNNM3Q8NE01 707 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 ENGASEQ8NFI3 743 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 SEC62Q99442 399 aaKnown RBP10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 DESI2Q9BSY9 194 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 LRRC2Q9BYS8 371 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 ABCB6Q9NP58 842 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 DONSONQ9NYP3 566 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 MRFAP1Q9Y605 127 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 SETD1AO15047 1707 aaKnown RBP10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 IVLP07476 585 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 SCP2P22307 547 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 EFCAB2Q5VUJ9 269 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 CEP57L1Q8IYX8 460 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 FSIP1Q8NA03 581 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 CCDC150Q8NCX0 1101 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 RHPN1Q8TCX5 695 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 ANO10Q9NW15 660 aa10.93□□□□□ -0.66
HMGCLL1-204ENST00000370852 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 CCT4P50991 539 aaKnown RBP10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 DHX8Q14562 1220 aaKnown RBP10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 PPP1R42Q7Z4L9 355 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 SUGP1Q8IWZ8 645 aaKnown RBP10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 CNTROBQ8N137 903 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 EHD4Q9H223 541 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 HSD3B7Q9H2F3 369 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 IMPACTQ9P2X3 320 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 ANKRD26Q9UPS8 1709 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 SLC27A2O14975 620 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 IBSPP21815 317 aaPredicted RBP10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 MAP2K2P36507 400 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 NCAPHQ15003 741 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 CCDC91Q7Z6B0 441 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 ZNF622Q969S3 477 aaKnown RBP eCLIP10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 CCDC102AQ96A19 550 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 KIFC2Q96AC6 838 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 USP44Q9H0E7 712 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 PPP2R2CQ9Y2T4 447 aa10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.92□□□□□ -0.66
HMGCLL1-204ENST00000370852 CCDC189A1A4V9 331 aa10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 SRGAP3O43295 1099 aa10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 RHOXF2BP0C7M4 288 aa10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 TXLNAP40222 546 aa10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 AXDND1Q5T1B0 1012 aaPredicted RBP10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 SULT6B1Q6IMI4 303 aa10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 TADA2BQ86TJ2 420 aa10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 RIN2Q8WYP3 895 aaPredicted RBP10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 RHOXF2Q9BQY4 288 aa10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 CDK19Q9BWU1 502 aa10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 CPSF1Q10570 1443 aaKnown RBP10.91□□□□□ -0.66
HMGCLL1-204ENST00000370852 LRRIQ3A6PVS8 624 aaPredicted RBP10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 PATL2C9JE40 543 aaKnown RBP10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 H3BQV1 296 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 KINO60870 393 aaKnown RBP10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 CHGBP05060 677 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 HNRNPH1P31943 449 aaKnown RBP10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 MNAT1P51948 309 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 FANCCQ00597 558 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 MTF1Q14872 753 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 IFFO2Q5TF58 517 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 HDGFL2Q7Z4V5 671 aaPredicted RBP10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 TMEM139Q8IV31 216 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 FAM204AQ9H8W3 233 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 PPLO60437 1756 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 RPS6KA5O75582 802 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 CAVIN2O95810 425 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 PDCP20941 246 aa10.9□□□□□ -0.66
HMGCLL1-204ENST00000370852 NDUFA8P51970 172 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms