RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 GTF2A1P52655 376 aaPredicted RBP19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 EIF2AK4Q9P2K8 1649 aaKnown RBP19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 MYO1BO43795 1136 aa19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 BICDL1Q6ZP65 573 aa19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 COL17A1Q9UMD9 1497 aaPredicted RBP19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 CD109Q6YHK3 1445 aa19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 CNKSR2Q8WXI2 1034 aa19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 PUS7Q96PZ0 661 aaKnown RBP19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 LMBRD1Q9NUN5 540 aa19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 KRT24Q2M2I5 525 aa19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 SPECC1LQ69YQ0 1117 aa19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 DZIP1Q86YF9 867 aaKnown RBP19.59■□□□□ 0.73
PTP4A1-201ENST00000370651 PA2G4Q9UQ80 394 aaKnown RBP19.58■□□□□ 0.73
PTP4A1-201ENST00000370651 WTAPQ15007 396 aa19.58■□□□□ 0.73
PTP4A1-201ENST00000370651 CCDC96Q2M329 555 aa19.58■□□□□ 0.73
PTP4A1-201ENST00000370651 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.73
PTP4A1-201ENST00000370651 RBM5P52756 815 aaKnown RBP eCLIP19.58■□□□□ 0.722e-6■□□□□ 9.9
PTP4A1-201ENST00000370651 PTPDC1A2A3K4 754 aa19.58■□□□□ 0.72
PTP4A1-201ENST00000370651 OTUD7AQ8TE49 926 aaPredicted RBP19.58■□□□□ 0.72
PTP4A1-201ENST00000370651 KSR2Q6VAB6 950 aa19.57■□□□□ 0.72
PTP4A1-201ENST00000370651 PRPF4BQ13523 1007 aaKnown RBP19.57■□□□□ 0.72
PTP4A1-201ENST00000370651 EIF4A2Q14240 407 aaKnown RBP19.57■□□□□ 0.72
PTP4A1-201ENST00000370651 MEX3CQ5U5Q3 659 aaKnown RBP19.57■□□□□ 0.72
PTP4A1-201ENST00000370651 WWC2Q6AWC2 1192 aa19.57■□□□□ 0.72
PTP4A1-201ENST00000370651 VPS18Q9P253 973 aa19.57■□□□□ 0.72
PTP4A1-201ENST00000370651 KARSQ15046 597 aaKnown RBP19.57■□□□□ 0.72
PTP4A1-201ENST00000370651 GIGYF2Q6Y7W6 1299 aaKnown RBP19.57■□□□□ 0.72
PTP4A1-201ENST00000370651 GTF3C6Q969F1 213 aa19.57■□□□□ 0.72
PTP4A1-201ENST00000370651 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 OPA1O60313 960 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 TCERG1LQ5VWI1 586 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 RAD50Q92878 1312 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 INSRP06213 1382 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 CPA1P15085 419 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 U2AF2P26368 475 aaKnown RBP eCLIP19.56■□□□□ 0.723e-21■■■■■ 32.4
PTP4A1-201ENST00000370651 ZNF652Q9Y2D9 606 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 PRC1O43663 620 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 C17orf53Q8N3J3 647 aaPredicted RBP19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 SNRPA1P09661 255 aaKnown RBP19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 NBPF7P0C2Y1 421 aaPredicted RBP19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 GPTP24298 496 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 LZTFL1Q9NQ48 299 aa19.56■□□□□ 0.72
PTP4A1-201ENST00000370651 APOBRQ0VD83 1088 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 EXOC1Q9NV70 894 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 NPC1L1Q9UHC9 1359 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 TUBBP07437 444 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 RTN1Q16799 776 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 UTP14AQ9BVJ6 771 aaKnown RBP19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 KRT23Q9C075 422 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 DMRT2Q9Y5R5 561 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 MPHOSPH10O00566 681 aaKnown RBP19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 ATL3Q6DD88 541 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 DHX32Q7L7V1 743 aaKnown RBP19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 TMTC2Q8N394 836 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 CTNNBL1Q8WYA6 563 aaPredicted RBP19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 PUF60Q9UHX1 559 aaKnown RBP19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 TACC1O75410 805 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 IFNL2Q8IZJ0 200 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 DRC1Q96MC2 740 aa19.55■□□□□ 0.72
PTP4A1-201ENST00000370651 FOXO3O43524 673 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 HSPA4P34932 840 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 FAM160A1Q05DH4 1040 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 BRAPQ7Z569 592 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 IFI16Q16666 785 aaKnown RBP19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 XAGE3Q8WTP9 111 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 MSH6P52701 1360 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 TSPY2A6NKD2 308 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 PHACTR2O75167 634 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 UQCRFS1P1P0C7P4 283 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 EVCP57679 992 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 ATRIPQ8WXE1 791 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 EBAG9O00559 213 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 KRT86O43790 486 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 KRT83P78385 493 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 ZNF569Q5MCW4 686 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 LINS1Q8NG48 757 aa19.54■□□□□ 0.72
PTP4A1-201ENST00000370651 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 PSMA7O14818 248 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 STAT6P42226 847 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 NBPF11Q86T75 865 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 DUOX2Q9NRD8 1548 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 BLMP54132 1417 aaPredicted RBP19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 MICALL1Q8N3F8 863 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 DHX58Q96C10 678 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 MACROD2A1Z1Q3 448 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 MYL5Q02045 173 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 MTHFSDQ2M296 383 aaKnown RBP19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 KAT14Q9H8E8 782 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 CNNM2Q9H8M5 875 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 LMBR1LQ6UX01 489 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 COPS6Q7L5N1 327 aa19.53■□□□□ 0.72
PTP4A1-201ENST00000370651 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.53■□□□□ 0.721e-7■□□□□ 9.9
PTP4A1-201ENST00000370651 ATP2C2O75185 946 aa19.52■□□□□ 0.72
PTP4A1-201ENST00000370651 DESP17661 470 aa19.52■□□□□ 0.72
PTP4A1-201ENST00000370651 PAG1Q9NWQ8 432 aa19.52■□□□□ 0.72
PTP4A1-201ENST00000370651 TMEM63CQ9P1W3 806 aa19.52■□□□□ 0.72
PTP4A1-201ENST00000370651 TRIM75PA6NK02 468 aa19.52■□□□□ 0.72
PTP4A1-201ENST00000370651 RHOXF2BP0C7M4 288 aa19.52■□□□□ 0.72
PTP4A1-201ENST00000370651 IL15P40933 162 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms