RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 BTAF1O14981 1849 aa4.92□□□□□ -1.62
MCF2-203ENST00000370576 LAMB1P07942 1786 aa4.92□□□□□ -1.62
MCF2-203ENST00000370576 CEBPAP49715 358 aaPredicted RBP4.92□□□□□ -1.62
MCF2-203ENST00000370576 SEMA3FQ13275 785 aa4.92□□□□□ -1.62
MCF2-203ENST00000370576 UVSSAQ2YD98 709 aa4.92□□□□□ -1.62
MCF2-203ENST00000370576 L3MBTL3Q96JM7 780 aaPredicted RBP4.92□□□□□ -1.62
MCF2-203ENST00000370576 RNPC3Q96LT9 517 aaKnown RBP4.92□□□□□ -1.62
MCF2-203ENST00000370576 ASB16Q96NS5 453 aa4.92□□□□□ -1.62
MCF2-203ENST00000370576 OSBPL2Q9H1P3 480 aa4.92□□□□□ -1.62
MCF2-203ENST00000370576 LZTS3O60299 673 aaPredicted RBP4.92□□□□□ -1.62
MCF2-203ENST00000370576 BIRC2Q13490 618 aa4.92□□□□□ -1.62
MCF2-203ENST00000370576 LARP6Q9BRS8 491 aaKnown RBP4.92□□□□□ -1.62
MCF2-203ENST00000370576 SEZ6LQ9BYH1 1024 aa4.92□□□□□ -1.62
MCF2-203ENST00000370576 ADAMTS8Q9UP79 889 aa4.92□□□□□ -1.62
MCF2-203ENST00000370576 PSME4Q14997 1843 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 TIMM44O43615 452 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 WDR78Q5VTH9 848 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 MCF2L2Q86YR7 1114 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 IFT122Q9HBG6 1241 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 CABP2Q9NPB3 220 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 KNSTRNQ9Y448 316 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 MAST2Q6P0Q8 1798 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 SPATA31A3Q5VYP0 1347 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 KDM6AO15550 1401 aaPredicted RBP4.91□□□□□ -1.62
MCF2-203ENST00000370576 WDHD1O75717 1129 aaPredicted RBP4.91□□□□□ -1.62
MCF2-203ENST00000370576 ZRANB2O95218 330 aaKnown RBP eCLIP4.91□□□□□ -1.62
MCF2-203ENST00000370576 FGRP09769 529 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 SAMD3Q8N6K7 520 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 MS4A4AQ96JQ5 239 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 TFIP11Q9UBB9 837 aaKnown RBP4.91□□□□□ -1.62
MCF2-203ENST00000370576 FOCADQ5VW36 1801 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 KLRG2A4D1S0 409 aaPredicted RBP4.91□□□□□ -1.62
MCF2-203ENST00000370576 SOX12O15370 315 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 CTHP32929 405 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 NFE2Q16621 373 aaPredicted RBP4.91□□□□□ -1.62
MCF2-203ENST00000370576 RC3H1Q5TC82 1133 aaKnown RBP4.91□□□□□ -1.62
MCF2-203ENST00000370576 NGDNQ8NEJ9 315 aaKnown RBP4.91□□□□□ -1.62
MCF2-203ENST00000370576 ATXN2LQ8WWM7 1075 aaKnown RBP4.91□□□□□ -1.62
MCF2-203ENST00000370576 SLX1AQ9BQ83 275 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 TANGO6Q9C0B7 1094 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 CABP1Q9NZU7 370 aa4.91□□□□□ -1.62
MCF2-203ENST00000370576 MEGF6O75095 1541 aa4.9□□□□□ -1.62
MCF2-203ENST00000370576 AK9Q5TCS8 1911 aa4.9□□□□□ -1.62
MCF2-203ENST00000370576 KCNQ2O43526 872 aa4.9□□□□□ -1.62
MCF2-203ENST00000370576 DKK1O94907 266 aa4.9□□□□□ -1.62
MCF2-203ENST00000370576 RFX1P22670 979 aa4.9□□□□□ -1.62
MCF2-203ENST00000370576 PPP1R18Q6NYC8 613 aa4.9□□□□□ -1.62
MCF2-203ENST00000370576 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.9□□□□□ -1.62
MCF2-203ENST00000370576 METTL5Q9NRN9 209 aaKnown RBP4.9□□□□□ -1.62
MCF2-203ENST00000370576 FAM217BQ9NTX9 383 aaPredicted RBP4.9□□□□□ -1.62
MCF2-203ENST00000370576 DHX16O60231 1041 aaKnown RBP4.9□□□□□ -1.63
MCF2-203ENST00000370576 PTGDRQ13258 359 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 C16orf54Q6UWD8 224 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.9□□□□□ -1.63
MCF2-203ENST00000370576 ARHGEF25Q86VW2 580 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 CLP1Q92989 425 aaKnown RBP4.9□□□□□ -1.63
MCF2-203ENST00000370576 SPDYE16A6NNV3 312 aaPredicted RBP4.9□□□□□ -1.63
MCF2-203ENST00000370576 STK10O94804 968 aaKnown RBP4.9□□□□□ -1.63
MCF2-203ENST00000370576 IGHA2P01877 340 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 CD53P19397 219 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 TDO2P48775 406 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 SLC10A5Q5PT55 438 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 HDGFL2Q7Z4V5 671 aaPredicted RBP4.9□□□□□ -1.63
MCF2-203ENST00000370576 CCAR1Q8IX12 1150 aaKnown RBP4.9□□□□□ -1.63
MCF2-203ENST00000370576 RASEFQ8IZ41 740 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 PRR7Q8TB68 274 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 ARHGAP45Q92619 1136 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 TTC14Q96N46 770 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 PAGR1Q9BTK6 254 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 C19orf44Q9H6X5 657 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 PPP1R1BQ9UD71 204 aaPredicted RBP4.9□□□□□ -1.63
MCF2-203ENST00000370576 EGFL7Q9UHF1 273 aa4.9□□□□□ -1.63
MCF2-203ENST00000370576 DDX60LQ5H9U9 1706 aaKnown RBP4.89□□□□□ -1.63
MCF2-203ENST00000370576 MYH7P12883 1935 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 LILRB3O75022 631 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 LDHCP07864 332 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 PDE4AP27815 886 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 CDC37Q16543 378 aaPredicted RBP4.89□□□□□ -1.63
MCF2-203ENST00000370576 NBPF9Q3BBW0 867 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 ALDH1L2Q3SY69 923 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 C9orf131Q5VYM1 1079 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 KANK3Q6NY19 840 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 USP48Q86UV5 1035 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 LIMD1Q9UGP4 676 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 SFMBT1Q9UHJ3 866 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 KIF16BQ96L93 1317 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 HIC1Q14526 733 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 LONRF1Q17RB8 773 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 PLBD1Q6P4A8 553 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 TTC30BQ8N4P2 665 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 IP6K1Q92551 441 aa4.89□□□□□ -1.63
MCF2-203ENST00000370576 PTGER2P43116 358 aa4.88□□□□□ -1.63
MCF2-203ENST00000370576 B4GALNT3Q6L9W6 998 aa4.88□□□□□ -1.63
MCF2-203ENST00000370576 CASC1Q6TDU7 716 aa4.88□□□□□ -1.63
MCF2-203ENST00000370576 FRMD6Q96NE9 622 aa4.88□□□□□ -1.63
MCF2-203ENST00000370576 NEUROD6Q96NK8 337 aa4.88□□□□□ -1.63
MCF2-203ENST00000370576 PUF60Q9UHX1 559 aaKnown RBP4.88□□□□□ -1.63
MCF2-203ENST00000370576 ABCC4O15439 1325 aa4.88□□□□□ -1.63
MCF2-203ENST00000370576 BICDL2A1A5D9 508 aa4.88□□□□□ -1.63
MCF2-203ENST00000370576 POLD1P28340 1107 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 454.3 ms