RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 RNF214Q8ND24 703 aa20.54■□□□□ 0.88
RTCA-203ENST00000370128 RABL6Q3YEC7 729 aaPredicted RBP20.53■□□□□ 0.88
RTCA-203ENST00000370128 PKD1L3Q7Z443 1732 aa20.53■□□□□ 0.88
RTCA-203ENST00000370128 TNS3Q68CZ2 1445 aa20.53■□□□□ 0.88
RTCA-203ENST00000370128 PHF14O94880 888 aa20.53■□□□□ 0.88
RTCA-203ENST00000370128 UBE3BQ7Z3V4 1068 aa20.53■□□□□ 0.88
RTCA-203ENST00000370128 MTMR6Q9Y217 621 aa20.53■□□□□ 0.88
RTCA-203ENST00000370128 COL15A1P39059 1388 aa20.52■□□□□ 0.88
RTCA-203ENST00000370128 ERICH4A6NGS2 130 aa20.52■□□□□ 0.88
RTCA-203ENST00000370128 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
RTCA-203ENST00000370128 ZNF589Q86UQ0 364 aaPredicted RBP20.52■□□□□ 0.88
RTCA-203ENST00000370128 EDC3Q96F86 508 aaKnown RBP20.52■□□□□ 0.88
RTCA-203ENST00000370128 DBNLQ9UJU6 430 aaKnown RBP20.52■□□□□ 0.88
RTCA-203ENST00000370128 TPCN1Q9ULQ1 816 aa20.52■□□□□ 0.88
RTCA-203ENST00000370128 ATP6V1DQ9Y5K8 247 aa20.52■□□□□ 0.88
RTCA-203ENST00000370128 TNNT3P45378 269 aaPredicted RBP20.52■□□□□ 0.87
RTCA-203ENST00000370128 STRCP1A6NGW2 1772 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 JCADQ9P266 1359 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 ATP5J2-PTCD1G3V325 749 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
RTCA-203ENST00000370128 PSMA5P28066 241 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 CABP4P57796 275 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 TFCP2Q12800 502 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 TNNI3KQ59H18 835 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 CREBRFQ8IUR6 639 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 NECAB1Q8N987 351 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 TAF6LQ9Y6J9 622 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 FPGT-TNNI3KV9GXZ4 949 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 GLI3P10071 1580 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 AFDNP55196 1824 aaKnown RBP20.51■□□□□ 0.87
RTCA-203ENST00000370128 ATP5JP18859 108 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 UBE2HP62256 183 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 SYCP1Q15431 976 aa20.51■□□□□ 0.87
RTCA-203ENST00000370128 ARFGEF2Q9Y6D5 1785 aa20.5■□□□□ 0.87
RTCA-203ENST00000370128 NCBP1Q09161 790 aaKnown RBP20.5■□□□□ 0.87
RTCA-203ENST00000370128 RNF20Q5VTR2 975 aa20.5■□□□□ 0.87
RTCA-203ENST00000370128 A0A087WZG4 1122 aa20.5■□□□□ 0.87
RTCA-203ENST00000370128 C17orf53Q8N3J3 647 aaPredicted RBP20.5■□□□□ 0.87
RTCA-203ENST00000370128 CASP7P55210 303 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 KRT222Q8N1A0 295 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 TRERF1Q96PN7 1200 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 SPATA31A3Q5VYP0 1347 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 FIBPO43427 364 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 TAF5LO75529 589 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 PRR29P0C7W0 189 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 NOP2P46087 812 aaKnown RBP20.49■□□□□ 0.87
RTCA-203ENST00000370128 CCDC183Q5T5S1 534 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 PLBD2Q8NHP8 589 aa20.49■□□□□ 0.87
RTCA-203ENST00000370128 BLOC1S2Q6QNY1 142 aa20.48■□□□□ 0.87
RTCA-203ENST00000370128 CADPS2Q86UW7 1296 aa20.48■□□□□ 0.87
RTCA-203ENST00000370128 CPDO75976 1380 aa20.48■□□□□ 0.87
RTCA-203ENST00000370128 DNM1Q05193 864 aaKnown RBP20.48■□□□□ 0.87
RTCA-203ENST00000370128 TSGA10IPQ3SY00 556 aa20.48■□□□□ 0.87
RTCA-203ENST00000370128 RPS6KB1P23443 525 aa20.47■□□□□ 0.87
RTCA-203ENST00000370128 TCEANC2Q96MN5 208 aa20.47■□□□□ 0.87
RTCA-203ENST00000370128 USPL1Q5W0Q7 1092 aa20.47■□□□□ 0.87
RTCA-203ENST00000370128 ALDH8A1Q9H2A2 487 aaPredicted RBP20.47■□□□□ 0.87
RTCA-203ENST00000370128 HMG20BQ9P0W2 317 aa20.47■□□□□ 0.87
RTCA-203ENST00000370128 RSPH14Q9UHP6 348 aa20.47■□□□□ 0.87
RTCA-203ENST00000370128 NDUFB9Q9Y6M9 179 aa20.47■□□□□ 0.87
RTCA-203ENST00000370128 VPS37CA5D8V6 355 aaPredicted RBP20.46■□□□□ 0.87
RTCA-203ENST00000370128 KIF18AQ8NI77 898 aa20.46■□□□□ 0.87
RTCA-203ENST00000370128 DBNDD2Q9BQY9 259 aa20.46■□□□□ 0.87
RTCA-203ENST00000370128 LAMB4A4D0S4 1761 aa20.46■□□□□ 0.87
RTCA-203ENST00000370128 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
RTCA-203ENST00000370128 RAD51AP2Q09MP3 1159 aa20.46■□□□□ 0.87
RTCA-203ENST00000370128 TOB2Q14106 344 aaPredicted RBP20.46■□□□□ 0.87
RTCA-203ENST00000370128 ANKRD1Q15327 319 aa20.46■□□□□ 0.87
RTCA-203ENST00000370128 NBPF14Q5TI25 921 aa20.46■□□□□ 0.87
RTCA-203ENST00000370128 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
RTCA-203ENST00000370128 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
RTCA-203ENST00000370128 HSP90B1P14625 803 aaKnown RBP20.45■□□□□ 0.86
RTCA-203ENST00000370128 GTF2A1P52655 376 aaPredicted RBP20.45■□□□□ 0.86
RTCA-203ENST00000370128 TPRNQ4KMQ1 711 aa20.45■□□□□ 0.86
RTCA-203ENST00000370128 HOMEZQ8IX15 550 aa20.45■□□□□ 0.86
RTCA-203ENST00000370128 PARP4Q9UKK3 1724 aaKnown RBP20.45■□□□□ 0.86
RTCA-203ENST00000370128 LMBR1LQ6UX01 489 aa20.45■□□□□ 0.86
RTCA-203ENST00000370128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.45■□□□□ 0.86
RTCA-203ENST00000370128 MYCBPQ99417 103 aaPredicted RBP20.45■□□□□ 0.86
RTCA-203ENST00000370128 LARP1BQ659C4 914 aaKnown RBP20.44■□□□□ 0.86
RTCA-203ENST00000370128 FAM184AQ8NB25 1140 aa20.44■□□□□ 0.86
RTCA-203ENST00000370128 TTC12Q9H892 705 aaPredicted RBP20.44■□□□□ 0.86
RTCA-203ENST00000370128 RFX7Q2KHR2 1363 aa20.44■□□□□ 0.86
RTCA-203ENST00000370128 CHGBP05060 677 aa20.44■□□□□ 0.86
RTCA-203ENST00000370128 HNRNPH2P55795 449 aaKnown RBP20.44■□□□□ 0.86
RTCA-203ENST00000370128 FOXO4P98177 505 aa20.44■□□□□ 0.86
RTCA-203ENST00000370128 HAUS7Q99871 368 aa20.44■□□□□ 0.86
RTCA-203ENST00000370128 ZNF609O15014 1411 aa20.43■□□□□ 0.86
RTCA-203ENST00000370128 CTR9Q6PD62 1173 aa20.43■□□□□ 0.86
RTCA-203ENST00000370128 H7C1W4 665 aa20.43■□□□□ 0.86
RTCA-203ENST00000370128 DHX16O60231 1041 aaKnown RBP20.43■□□□□ 0.86
RTCA-203ENST00000370128 NCAPGQ9BPX3 1015 aa20.43■□□□□ 0.86
RTCA-203ENST00000370128 CDC37L1Q7L3B6 337 aa20.42■□□□□ 0.86
RTCA-203ENST00000370128 CARD10Q9BWT7 1032 aa20.42■□□□□ 0.86
RTCA-203ENST00000370128 PATL2C9JE40 543 aaKnown RBP20.42■□□□□ 0.86
RTCA-203ENST00000370128 TTLL7Q6ZT98 887 aa20.42■□□□□ 0.86
RTCA-203ENST00000370128 SEC62Q99442 399 aaKnown RBP20.42■□□□□ 0.86
RTCA-203ENST00000370128 CCDC129Q6ZRS4 1044 aa20.41■□□□□ 0.86
RTCA-203ENST00000370128 PDCP20941 246 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms