RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ANKRD36CQ5JPF3 1778 aa11.94□□□□□ -0.5
PRPF38B-203ENST00000370025 CSF1RP07333 972 aa11.94□□□□□ -0.5
PRPF38B-203ENST00000370025 ITPK1Q13572 414 aa11.94□□□□□ -0.5
PRPF38B-203ENST00000370025 NEUROD6Q96NK8 337 aa11.94□□□□□ -0.5
PRPF38B-203ENST00000370025 FSD1Q9BTV5 496 aa11.94□□□□□ -0.5
PRPF38B-203ENST00000370025 CEP126Q9P2H0 1117 aa11.94□□□□□ -0.5
PRPF38B-203ENST00000370025 ZKSCAN5Q9Y2L8 839 aa11.94□□□□□ -0.5
PRPF38B-203ENST00000370025 SASS6Q6UVJ0 657 aa11.93□□□□□ -0.5
PRPF38B-203ENST00000370025 ZNF34Q8IZ26 560 aa11.93□□□□□ -0.5
PRPF38B-203ENST00000370025 DBNDD2Q9BQY9 259 aa11.93□□□□□ -0.5
PRPF38B-203ENST00000370025 IRS4O14654 1257 aaPredicted RBP11.93□□□□□ -0.5
PRPF38B-203ENST00000370025 LRRC24Q50LG9 513 aa11.93□□□□□ -0.5
PRPF38B-203ENST00000370025 ATP2B3Q16720 1220 aa11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 IL25Q9H293 177 aa11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 RAD50Q92878 1312 aa11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 KLHL40Q2TBA0 621 aa11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 AKAP2Q9Y2D5 859 aa11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 PDE8AO60658 829 aa11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 HSPA4P34932 840 aa11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 NEK4P51957 841 aa11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 LSG1Q9H089 658 aaKnown RBP11.92□□□□□ -0.5
PRPF38B-203ENST00000370025 CTSWP56202 376 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 SYNE4Q8N205 404 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 TTLL11Q8NHH1 800 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 PUS3Q9BZE2 481 aaKnown RBP11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 CICQ96RK0 1608 aaPredicted RBP11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 ANKRD18BA2A2Z9 1011 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 HSPA1LP34931 641 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 MCM2P49736 904 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 TIMM10P62072 90 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 PARP10Q53GL7 1025 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 ZNF771Q7L3S4 317 aaPredicted RBP11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 PALD1Q9ULE6 856 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 ZNF652Q9Y2D9 606 aa11.91□□□□□ -0.5
PRPF38B-203ENST00000370025 DTNBO60941 627 aa11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 CDK11BP21127 795 aaKnown RBP11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 ITGA6P23229 1130 aa11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 IL17RAQ96F46 866 aa11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 GJD4Q96KN9 370 aaPredicted RBP11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 AK7Q96M32 723 aa11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 DNAJC2Q99543 621 aaKnown RBP11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 HAUS7Q99871 368 aa11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 UBN2Q6ZU65 1347 aa11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 CAMTA2O94983 1202 aa11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 NMIQ13287 307 aaPredicted RBP11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 CSPP1Q1MSJ5 1256 aa11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 UTP14AQ9BVJ6 771 aaKnown RBP11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 NSFL1CQ9UNZ2 370 aaKnown RBP11.9□□□□□ -0.5
PRPF38B-203ENST00000370025 A0A1B0GUL7 405 aa11.9□□□□□ -0.51
PRPF38B-203ENST00000370025 MYH14Q7Z406 1995 aaKnown RBP11.9□□□□□ -0.51
PRPF38B-203ENST00000370025 SH3TC1Q8TE82 1336 aa11.9□□□□□ -0.51
PRPF38B-203ENST00000370025 RREB1Q92766 1687 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 MYH3P11055 1940 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 ZNF500O60304 480 aaPredicted RBP11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 GORABQ5T7V8 394 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 LDHAL6AQ6ZMR3 332 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 GREM2Q9H772 168 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 TTC12Q9H892 705 aaPredicted RBP11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 AFF2P51816 1311 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 MTERF4Q7Z6M4 381 aaKnown RBP11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 FAM227BQ96M60 508 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 ZNF609O15014 1411 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 ZNF831Q5JPB2 1677 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 U2AF2P26368 475 aaKnown RBP eCLIP11.89□□□□□ -0.511e-7■■■■□ 19.9
PRPF38B-203ENST00000370025 KCNJ4P48050 445 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 SUSD4Q5VX71 490 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 CNNM1Q9NRU3 951 aa11.89□□□□□ -0.51
PRPF38B-203ENST00000370025 DDIT3P35638 169 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 CCDC158Q5M9N0 1113 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 TRPC5Q9UL62 973 aaPredicted RBP11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 NIP7Q9Y221 180 aaKnown RBP eCLIP11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 RFX7Q2KHR2 1363 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 KIAA2012Q0VF49 1180 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 METTL24Q5JXM2 366 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 ZGPATQ8N5A5 531 aaKnown RBP11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 LINC00116Q8NCU8 138 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 EDC3Q96F86 508 aaKnown RBP11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 CCDC171Q6TFL3 1326 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 IFIT1P09914 478 aaKnown RBP11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 CLEC4GQ6UXB4 293 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 SNX14Q9Y5W7 946 aa11.88□□□□□ -0.51
PRPF38B-203ENST00000370025 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 PTH1RQ03431 593 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 TICAM2Q86XR7 235 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 CCDC39Q9UFE4 941 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 CNTNAP4Q9C0A0 1308 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 A0A0D9SFI3 127 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 PDIA4P13667 645 aaKnown RBP11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 KBTBD3Q8NAB2 608 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 TRERF1Q96PN7 1200 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 GDPD2Q9HCC8 539 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms