RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
HMGCS2-201ENST00000369406 SLC10A5Q5PT55 438 aa17.17■□□□□ 0.34
HMGCS2-201ENST00000369406 XAGE2Q96GT9 111 aa17.17■□□□□ 0.34
HMGCS2-201ENST00000369406 ADRA2BP18089 450 aa17.17■□□□□ 0.34
HMGCS2-201ENST00000369406 SCARF1Q14162 830 aa17.17■□□□□ 0.34
HMGCS2-201ENST00000369406 CASC1Q6TDU7 716 aa17.17■□□□□ 0.34
HMGCS2-201ENST00000369406 MYH7P12883 1935 aa17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 TAF5LO75529 589 aa17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 SSFA2P28290 1259 aa17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 CWC27Q6UX04 472 aaKnown RBP17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 ANKRD31Q8N7Z5 1873 aa17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 FAM227BQ96M60 508 aa17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 SF3B3Q15393 1217 aaKnown RBP17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 SLFNL1Q499Z3 407 aa17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 HAUS7Q99871 368 aa17.16■□□□□ 0.34
HMGCS2-201ENST00000369406 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 SGSM2O43147 1006 aa17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 DDR1Q08345 913 aa17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 ATP2B3Q16720 1220 aa17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 PI16Q6UXB8 463 aa17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 DDX46Q7L014 1031 aaKnown RBP17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 CELF1Q92879 486 aaKnown RBP17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 DDRGK1Q96HY6 314 aa17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 PALD1Q9ULE6 856 aa17.15■□□□□ 0.34
HMGCS2-201ENST00000369406 A0A0D9SFI3 127 aa17.14■□□□□ 0.33
HMGCS2-201ENST00000369406 PDE8BO95263 885 aa17.14■□□□□ 0.33
HMGCS2-201ENST00000369406 NMIQ13287 307 aaPredicted RBP17.14■□□□□ 0.33
HMGCS2-201ENST00000369406 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
HMGCS2-201ENST00000369406 ANTXR1Q9H6X2 564 aa17.14■□□□□ 0.33
HMGCS2-201ENST00000369406 FGFR2P21802 821 aa17.13■□□□□ 0.33
HMGCS2-201ENST00000369406 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
HMGCS2-201ENST00000369406 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
HMGCS2-201ENST00000369406 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
HMGCS2-201ENST00000369406 ANO2Q9NQ90 1003 aa17.13■□□□□ 0.33
HMGCS2-201ENST00000369406 TM4SF1P30408 202 aa17.13■□□□□ 0.33
HMGCS2-201ENST00000369406 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
HMGCS2-201ENST00000369406 SNRKQ9NRH2 765 aa17.13■□□□□ 0.33
HMGCS2-201ENST00000369406 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 LSG1Q9H089 658 aaKnown RBP17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 GOLGB1Q14789 3259 aaKnown RBP17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 GOLIM4O00461 696 aa17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 REC8O95072 547 aa17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 TPTE2Q6XPS3 522 aa17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 TFCP2L1Q9NZI6 479 aa17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 AKAP2Q9Y2D5 859 aa17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 MROH5Q6ZUA9 1318 aa17.12■□□□□ 0.33
HMGCS2-201ENST00000369406 NRXN2Q9P2S2 1712 aa17.11■□□□□ 0.33
HMGCS2-201ENST00000369406 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
HMGCS2-201ENST00000369406 MPHOSPH8Q99549 860 aa17.11■□□□□ 0.33
HMGCS2-201ENST00000369406 DIAPH3Q9NSV4 1193 aa17.11■□□□□ 0.33
HMGCS2-201ENST00000369406 PTH1RQ03431 593 aa17.11■□□□□ 0.33
HMGCS2-201ENST00000369406 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
HMGCS2-201ENST00000369406 CHRNDQ07001 517 aa17.11■□□□□ 0.33
HMGCS2-201ENST00000369406 PNPLA7Q6ZV29 1317 aa17.11■□□□□ 0.33
HMGCS2-201ENST00000369406 IFIT1P09914 478 aaKnown RBP17.1■□□□□ 0.33
HMGCS2-201ENST00000369406 IGHMBP2P38935 993 aaKnown RBP17.1■□□□□ 0.33
HMGCS2-201ENST00000369406 PHKA1P46020 1223 aa17.1■□□□□ 0.33
HMGCS2-201ENST00000369406 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
HMGCS2-201ENST00000369406 MCAMP43121 646 aa17.1■□□□□ 0.33
HMGCS2-201ENST00000369406 CNBD1Q8NA66 436 aa17.1■□□□□ 0.33
HMGCS2-201ENST00000369406 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
HMGCS2-201ENST00000369406 PAG1Q9NWQ8 432 aa17.1■□□□□ 0.33
HMGCS2-201ENST00000369406 MED23Q9ULK4 1368 aa17.1■□□□□ 0.33
HMGCS2-201ENST00000369406 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
HMGCS2-201ENST00000369406 PUM3Q15397 648 aaKnown RBP17.09■□□□□ 0.33
HMGCS2-201ENST00000369406 NLRP3Q96P20 1036 aa17.09■□□□□ 0.33
HMGCS2-201ENST00000369406 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
HMGCS2-201ENST00000369406 DOCK2Q92608 1830 aa17.09■□□□□ 0.33
HMGCS2-201ENST00000369406 SERPINB2P05120 415 aa17.09■□□□□ 0.33
HMGCS2-201ENST00000369406 HSP90B1P14625 803 aaKnown RBP17.09■□□□□ 0.33
HMGCS2-201ENST00000369406 TTC39AQ5SRH9 613 aa17.09■□□□□ 0.33
HMGCS2-201ENST00000369406 RAD50Q92878 1312 aa17.09■□□□□ 0.33
HMGCS2-201ENST00000369406 COL11A2P13942 1736 aaPredicted RBP17.08■□□□□ 0.33
HMGCS2-201ENST00000369406 ZAP70P43403 619 aa17.08■□□□□ 0.33
HMGCS2-201ENST00000369406 ANKRD18AQ8IVF6 992 aa17.08■□□□□ 0.33
HMGCS2-201ENST00000369406 CDC5LQ99459 802 aaKnown RBP17.08■□□□□ 0.33
HMGCS2-201ENST00000369406 GORABQ5T7V8 394 aa17.08■□□□□ 0.32
HMGCS2-201ENST00000369406 CCDC102BQ68D86 513 aa17.08■□□□□ 0.32
HMGCS2-201ENST00000369406 CCDC129Q6ZRS4 1044 aa17.08■□□□□ 0.32
HMGCS2-201ENST00000369406 KBTBD3Q8NAB2 608 aa17.08■□□□□ 0.32
HMGCS2-201ENST00000369406 FKBP4Q02790 459 aaKnown RBP eCLIP17.07■□□□□ 0.32
HMGCS2-201ENST00000369406 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
HMGCS2-201ENST00000369406 LPIN2Q92539 896 aa17.07■□□□□ 0.32
HMGCS2-201ENST00000369406 MINPP1Q9UNW1 487 aa17.07■□□□□ 0.32
HMGCS2-201ENST00000369406 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
HMGCS2-201ENST00000369406 MYH13Q9UKX3 1938 aa17.07■□□□□ 0.32
HMGCS2-201ENST00000369406 KLRK1P26718 216 aa17.07■□□□□ 0.32
HMGCS2-201ENST00000369406 CCDC158Q5M9N0 1113 aa17.07■□□□□ 0.32
HMGCS2-201ENST00000369406 BSDC1Q9NW68 430 aaPredicted RBP17.07■□□□□ 0.32
HMGCS2-201ENST00000369406 MSL1Q68DK7 614 aa17.06■□□□□ 0.32
HMGCS2-201ENST00000369406 RASEFQ8IZ41 740 aa17.06■□□□□ 0.32
HMGCS2-201ENST00000369406 CACNA1SQ13698 1873 aa17.06■□□□□ 0.32
HMGCS2-201ENST00000369406 DEFB132Q7Z7B7 95 aa17.06■□□□□ 0.32
HMGCS2-201ENST00000369406 COL1A1P02452 1464 aaPredicted RBP17.05■□□□□ 0.32
HMGCS2-201ENST00000369406 NPHP1O15259 732 aa17.05■□□□□ 0.32
HMGCS2-201ENST00000369406 HSPA4P34932 840 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms