RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 U2AF2P26368 475 aaKnown RBP eCLIP11.45□□□□□ -0.58
SIM1-202ENST00000369208 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 PDRG1Q9NUG6 133 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 NPHP3Q7Z494 1330 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 NCBP1Q09161 790 aaKnown RBP11.45□□□□□ -0.58
SIM1-202ENST00000369208 CCDC152Q4G0S7 254 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 PANK2Q9BZ23 570 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 CACNA2D4Q7Z3S7 1137 aa11.45□□□□□ -0.58
SIM1-202ENST00000369208 GBP5Q96PP8 586 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 CCDC160A6NGH7 325 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 MINDY4BA8MYZ0 360 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 AMPD3Q01432 767 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 KRT28Q7Z3Y7 464 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 SNX21Q969T3 373 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 CABS1Q96KC9 395 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 ODF2LQ9ULJ1 636 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 AMOTL2Q9Y2J4 779 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 MXRA7P84157 204 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 SLC20A2Q08357 652 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 MED4Q9NPJ6 270 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 SSX2IPQ9Y2D8 614 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 TOP1P11387 765 aaKnown RBP11.44□□□□□ -0.58
SIM1-202ENST00000369208 MCM6Q14566 821 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 RRS1Q15050 365 aaKnown RBP11.44□□□□□ -0.58
SIM1-202ENST00000369208 JDP2Q8WYK2 163 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 TBC1D31Q96DN5 1066 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 TBC1D32Q96NH3 1257 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 PPP1R9BQ96SB3 815 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 UTP14AQ9BVJ6 771 aaKnown RBP11.44□□□□□ -0.58
SIM1-202ENST00000369208 TOP2BQ02880 1626 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 NUCB1Q02818 461 aa11.44□□□□□ -0.58
SIM1-202ENST00000369208 MVPQ14764 893 aaKnown RBP11.44□□□□□ -0.58
SIM1-202ENST00000369208 DBF4Q9UBU7 674 aaPredicted RBP11.44□□□□□ -0.58
SIM1-202ENST00000369208 CHCHD3Q9NX63 227 aaKnown RBP11.44□□□□□ -0.58
SIM1-202ENST00000369208 A0A087WUV0 522 aaPredicted RBP11.43□□□□□ -0.58
SIM1-202ENST00000369208 SNCBQ16143 134 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 FAM177A1Q8N128 213 aaPredicted RBP11.43□□□□□ -0.58
SIM1-202ENST00000369208 MICAL1Q8TDZ2 1067 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 CTAGE9A4FU28 777 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 APBB1IPQ7Z5R6 666 aaPredicted RBP11.43□□□□□ -0.58
SIM1-202ENST00000369208 SAAL1Q96ER3 474 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 SPATA32Q96LK8 384 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 RRP15Q9Y3B9 282 aaKnown RBP11.43□□□□□ -0.58
SIM1-202ENST00000369208 CCDC194A0A1B0GVG4 234 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 PPP1R12AO14974 1030 aaPredicted RBP11.43□□□□□ -0.58
SIM1-202ENST00000369208 CREB3O43889 395 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 HSP90AA5PQ58FG0 334 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 GFM2Q969S9 779 aaKnown RBP11.43□□□□□ -0.58
SIM1-202ENST00000369208 RUSC2Q8N2Y8 1516 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 ALS2CR12Q96Q35 445 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 MIER3Q7Z3K6 550 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 VTI1AQ96AJ9 217 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 SAMD15Q9P1V8 674 aa11.43□□□□□ -0.58
SIM1-202ENST00000369208 CFAP65Q6ZU64 1925 aaKnown RBP11.43□□□□□ -0.58
SIM1-202ENST00000369208 ZNF445P59923 1031 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 CEBPZQ03701 1054 aaKnown RBP11.42□□□□□ -0.58
SIM1-202ENST00000369208 CTAGE15A4D2H0 777 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 CTAGE8P0CG41 777 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 CTAGE6Q86UF2 777 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 CTAGE4Q8IX94 777 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 SLC12A7Q9Y666 1083 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 USO1O60763 962 aaKnown RBP11.42□□□□□ -0.58
SIM1-202ENST00000369208 CCDC129Q6ZRS4 1044 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 RAB3IPQ96QF0 476 aaPredicted RBP11.42□□□□□ -0.58
SIM1-202ENST00000369208 NSD2O96028 1365 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 HOOK3Q86VS8 718 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 APLFQ8IW19 511 aaPredicted RBP11.42□□□□□ -0.58
SIM1-202ENST00000369208 SETDB2Q96T68 719 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 NSD3Q9BZ95 1437 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 ERMNQ8TAM6 284 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 IRX4P78413 519 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 STK3Q13188 491 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 CWC25Q9NXE8 425 aaPredicted RBP11.42□□□□□ -0.58
SIM1-202ENST00000369208 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
SIM1-202ENST00000369208 PAIP2BQ9ULR5 123 aaKnown RBP11.42□□□□□ -0.58
SIM1-202ENST00000369208 CALML4Q96GE6 196 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 MYD88Q99836 296 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 CRNKL1Q9BZJ0 848 aaKnown RBP11.41□□□□□ -0.58
SIM1-202ENST00000369208 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
SIM1-202ENST00000369208 TMX1Q9H3N1 280 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 NESP48681 1621 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 MACROD2A1Z1Q3 448 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 SPA17Q15506 151 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 MAP7D1Q3KQU3 841 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 RANBP6O60518 1105 aaKnown RBP11.41□□□□□ -0.58
SIM1-202ENST00000369208 SMIM24O75264 130 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 UQCRFS1P1P0C7P4 283 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 FAM200AQ8TCP9 573 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 FOXO3O43524 673 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 PPFIA1Q13136 1202 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 CROCCP2Q86T23 111 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 SUFUQ9UMX1 484 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 IBTKQ9P2D0 1353 aaPredicted RBP11.41□□□□□ -0.58
SIM1-202ENST00000369208 DUSP27Q5VZP5 1158 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 ATRIPQ8WXE1 791 aa11.41□□□□□ -0.58
SIM1-202ENST00000369208 JAKMIP1Q96N16 626 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms