RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 SCARF1Q14162 830 aa14.07□□□□□ -0.16
TUBE1-201ENST00000368657 TTLL12Q14166 644 aaPredicted RBP14.07□□□□□ -0.16
TUBE1-201ENST00000368657 ANGEL2Q5VTE6 544 aaKnown RBP14.07□□□□□ -0.16
TUBE1-201ENST00000368657 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
TUBE1-201ENST00000368657 ERBB4Q15303 1308 aa14.07□□□□□ -0.16
TUBE1-201ENST00000368657 SP3Q02447 781 aa14.06□□□□□ -0.16
TUBE1-201ENST00000368657 ERVV-1B6SEH8 477 aa14.05□□□□□ -0.16
TUBE1-201ENST00000368657 ZBTB7BO15156 539 aaPredicted RBP14.05□□□□□ -0.16
TUBE1-201ENST00000368657 NF2P35240 595 aa14.05□□□□□ -0.16
TUBE1-201ENST00000368657 SPRYD7Q5W111 196 aa14.05□□□□□ -0.16
TUBE1-201ENST00000368657 MTMR10Q9NXD2 777 aa14.05□□□□□ -0.16
TUBE1-201ENST00000368657 SNRPA1P09661 255 aaKnown RBP14.04□□□□□ -0.16
TUBE1-201ENST00000368657 WASHC4Q2M389 1173 aa14.04□□□□□ -0.16
TUBE1-201ENST00000368657 OTUD7BQ6GQQ9 843 aa14.04□□□□□ -0.16
TUBE1-201ENST00000368657 NKX2-3Q8TAU0 364 aa14.04□□□□□ -0.16
TUBE1-201ENST00000368657 ASTN2O75129 1339 aaPredicted RBP14.04□□□□□ -0.16
TUBE1-201ENST00000368657 IBTKQ9P2D0 1353 aaPredicted RBP14.04□□□□□ -0.16
TUBE1-201ENST00000368657 ZNF609O15014 1411 aa14.04□□□□□ -0.16
TUBE1-201ENST00000368657 ARMC9Q7Z3E5 817 aa14.03□□□□□ -0.16
TUBE1-201ENST00000368657 IL17REQ8NFR9 667 aa14.03□□□□□ -0.16
TUBE1-201ENST00000368657 ABCC4O15439 1325 aa14.02□□□□□ -0.17
TUBE1-201ENST00000368657 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
TUBE1-201ENST00000368657 VIL1P09327 827 aaKnown RBP14.02□□□□□ -0.17
TUBE1-201ENST00000368657 ZNF280AP59817 542 aaPredicted RBP14.02□□□□□ -0.17
TUBE1-201ENST00000368657 PTPN12Q05209 780 aaKnown RBP14.02□□□□□ -0.17
TUBE1-201ENST00000368657 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
TUBE1-201ENST00000368657 DBNDD1Q9H9R9 158 aa14.02□□□□□ -0.17
TUBE1-201ENST00000368657 LAMA3Q16787 3333 aa14.02□□□□□ -0.17
TUBE1-201ENST00000368657 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
TUBE1-201ENST00000368657 GNAT3A8MTJ3 354 aa14.01□□□□□ -0.17
TUBE1-201ENST00000368657 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
TUBE1-201ENST00000368657 PLA2G5P39877 138 aa14.01□□□□□ -0.17
TUBE1-201ENST00000368657 SLC10A5Q5PT55 438 aa14.01□□□□□ -0.17
TUBE1-201ENST00000368657 SUSD4Q5VX71 490 aa14.01□□□□□ -0.17
TUBE1-201ENST00000368657 TMC4Q7Z404 712 aa14.01□□□□□ -0.17
TUBE1-201ENST00000368657 PTCH2Q9Y6C5 1203 aa14.01□□□□□ -0.17
TUBE1-201ENST00000368657 KDM3BQ7LBC6 1761 aa14.01□□□□□ -0.17
TUBE1-201ENST00000368657 PRKAR2AP13861 404 aaKnown RBP14□□□□□ -0.17
TUBE1-201ENST00000368657 BMP8BP34820 402 aa14□□□□□ -0.17
TUBE1-201ENST00000368657 LDLRAD1Q5T700 205 aa14□□□□□ -0.17
TUBE1-201ENST00000368657 C3orf67Q6ZVT6 689 aa14□□□□□ -0.17
TUBE1-201ENST00000368657 Q7L0L9 218 aa14□□□□□ -0.17
TUBE1-201ENST00000368657 PPP1R42Q7Z4L9 355 aa14□□□□□ -0.17
TUBE1-201ENST00000368657 FAM122AQ96E09 287 aa14□□□□□ -0.17
TUBE1-201ENST00000368657 IGF2BP3O00425 579 aaKnown RBP eCLIP13.99□□□□□ -0.17
TUBE1-201ENST00000368657 KCNQ3O43525 872 aa13.99□□□□□ -0.17
TUBE1-201ENST00000368657 MYCP01106 439 aaPredicted RBP13.99□□□□□ -0.17
TUBE1-201ENST00000368657 HMOX1P09601 288 aa13.99□□□□□ -0.17
TUBE1-201ENST00000368657 ZBTB48P10074 688 aaPredicted RBP13.99□□□□□ -0.17
TUBE1-201ENST00000368657 CRHR2Q13324 411 aa13.99□□□□□ -0.17
TUBE1-201ENST00000368657 AGBL3Q8NEM8 1001 aa13.99□□□□□ -0.17
TUBE1-201ENST00000368657 SLC10A4Q96EP9 437 aa13.99□□□□□ -0.17
TUBE1-201ENST00000368657 KCNQ5Q9NR82 932 aa13.99□□□□□ -0.17
TUBE1-201ENST00000368657 STAP2Q9UGK3 403 aa13.99□□□□□ -0.17
TUBE1-201ENST00000368657 VCANP13611 3396 aa13.99□□□□□ -0.17
TUBE1-201ENST00000368657 ECE2O60344 883 aa13.98□□□□□ -0.17
TUBE1-201ENST00000368657 NTSR2O95665 410 aa13.98□□□□□ -0.17
TUBE1-201ENST00000368657 LRIT3Q3SXY7 679 aa13.98□□□□□ -0.17
TUBE1-201ENST00000368657 PRAMEF18Q5VWM3 479 aa13.98□□□□□ -0.17
TUBE1-201ENST00000368657 UBE2Q1Q7Z7E8 422 aa13.98□□□□□ -0.17
TUBE1-201ENST00000368657 RTL9Q8NET4 1388 aa13.97□□□□□ -0.17
TUBE1-201ENST00000368657 RIMBP2O15034 1052 aa13.97□□□□□ -0.17
TUBE1-201ENST00000368657 EVI5O60447 810 aa13.97□□□□□ -0.17
TUBE1-201ENST00000368657 GPTP24298 496 aa13.97□□□□□ -0.17
TUBE1-201ENST00000368657 DDX46Q7L014 1031 aaKnown RBP13.97□□□□□ -0.17
TUBE1-201ENST00000368657 ZNF34Q8IZ26 560 aa13.97□□□□□ -0.17
TUBE1-201ENST00000368657 SYMPKQ92797 1274 aaKnown RBP13.97□□□□□ -0.17
TUBE1-201ENST00000368657 EYA3Q99504 573 aa13.97□□□□□ -0.17
TUBE1-201ENST00000368657 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
TUBE1-201ENST00000368657 MAP3K15Q6ZN16 1313 aa13.96□□□□□ -0.17
TUBE1-201ENST00000368657 UBN2Q6ZU65 1347 aa13.96□□□□□ -0.17
TUBE1-201ENST00000368657 CAP1Q01518 475 aa13.96□□□□□ -0.17
TUBE1-201ENST00000368657 GRAPQ13588 217 aa13.96□□□□□ -0.17
TUBE1-201ENST00000368657 PARP10Q53GL7 1025 aa13.96□□□□□ -0.17
TUBE1-201ENST00000368657 GRAPLQ8TC17 118 aaPredicted RBP13.96□□□□□ -0.17
TUBE1-201ENST00000368657 SHISA4Q96DD7 197 aa13.96□□□□□ -0.17
TUBE1-201ENST00000368657 SPTBN5Q9NRC6 3674 aaKnown RBP13.95□□□□□ -0.18
TUBE1-201ENST00000368657 UNCXA6NJT0 531 aa13.95□□□□□ -0.18
TUBE1-201ENST00000368657 USP17L8P0C7I0 530 aa13.95□□□□□ -0.18
TUBE1-201ENST00000368657 GJA8P48165 433 aa13.95□□□□□ -0.18
TUBE1-201ENST00000368657 DOK7Q18PE1 504 aa13.95□□□□□ -0.18
TUBE1-201ENST00000368657 KIF6Q6ZMV9 814 aa13.95□□□□□ -0.18
TUBE1-201ENST00000368657 MORC1Q86VD1 984 aa13.95□□□□□ -0.18
TUBE1-201ENST00000368657 GAS2L2Q8NHY3 880 aa13.95□□□□□ -0.18
TUBE1-201ENST00000368657 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
TUBE1-201ENST00000368657 NSFL1CQ9UNZ2 370 aaKnown RBP13.95□□□□□ -0.18
TUBE1-201ENST00000368657 RPTORQ8N122 1335 aa13.94□□□□□ -0.18
TUBE1-201ENST00000368657 C6orf229H3BNL8 230 aa13.94□□□□□ -0.18
TUBE1-201ENST00000368657 GNRH1P01148 92 aa13.94□□□□□ -0.18
TUBE1-201ENST00000368657 PRMT2P55345 433 aa13.94□□□□□ -0.18
TUBE1-201ENST00000368657 RSBN1LQ6PCB5 846 aaPredicted RBP13.94□□□□□ -0.18
TUBE1-201ENST00000368657 NUP98P52948 1817 aa13.94□□□□□ -0.18
TUBE1-201ENST00000368657 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
TUBE1-201ENST00000368657 G3V3G9 751 aa13.93□□□□□ -0.18
TUBE1-201ENST00000368657 GJB1P08034 283 aa13.93□□□□□ -0.18
TUBE1-201ENST00000368657 CAPN2P17655 700 aa13.93□□□□□ -0.18
TUBE1-201ENST00000368657 DCAF8Q5TAQ9 597 aa13.93□□□□□ -0.18
TUBE1-201ENST00000368657 NGEFQ8N5V2 710 aa13.93□□□□□ -0.18
TUBE1-201ENST00000368657 WNK4Q96J92 1243 aa13.93□□□□□ -0.18
TUBE1-201ENST00000368657 GDF15Q99988 308 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms