RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 HOXC9P31274 260 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 TXLNBQ8N3L3 684 aa12.47□□□□□ -0.41
EBF3-202ENST00000368648 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.41
EBF3-202ENST00000368648 MAST1Q9Y2H9 1570 aa12.46□□□□□ -0.41
EBF3-202ENST00000368648 HINFPQ9BQA5 517 aa12.46□□□□□ -0.41
EBF3-202ENST00000368648 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.41
EBF3-202ENST00000368648 ZMYM4Q5VZL5 1548 aa12.46□□□□□ -0.41
EBF3-202ENST00000368648 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.42
EBF3-202ENST00000368648 HYPKQ9NX55 129 aa12.46□□□□□ -0.42
EBF3-202ENST00000368648 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.42
EBF3-202ENST00000368648 ATP6V1AP38606 617 aa12.46□□□□□ -0.42
EBF3-202ENST00000368648 CTR9Q6PD62 1173 aa12.46□□□□□ -0.42
EBF3-202ENST00000368648 LRP2BPQ9P2M1 347 aa12.46□□□□□ -0.42
EBF3-202ENST00000368648 ASXL1Q8IXJ9 1541 aa12.45□□□□□ -0.42
EBF3-202ENST00000368648 SF3A3Q12874 501 aaKnown RBP eCLIP12.45□□□□□ -0.42
EBF3-202ENST00000368648 NDUFB9Q9Y6M9 179 aa12.45□□□□□ -0.42
EBF3-202ENST00000368648 ZNF75DP51815 510 aa12.45□□□□□ -0.42
EBF3-202ENST00000368648 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
EBF3-202ENST00000368648 IFIT5Q13325 482 aaKnown RBP12.45□□□□□ -0.42
EBF3-202ENST00000368648 COPS6Q7L5N1 327 aa12.45□□□□□ -0.42
EBF3-202ENST00000368648 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
EBF3-202ENST00000368648 ZNHIT6Q9NWK9 470 aaKnown RBP12.45□□□□□ -0.42
EBF3-202ENST00000368648 RFC4P35249 363 aa12.45□□□□□ -0.42
EBF3-202ENST00000368648 ZSCAN25Q6NSZ9 544 aa12.45□□□□□ -0.42
EBF3-202ENST00000368648 CDC37L1Q7L3B6 337 aa12.45□□□□□ -0.42
EBF3-202ENST00000368648 PTPRMP28827 1452 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 STX17P56962 302 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 GPIHBP1Q8IV16 184 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 XAGE3Q8WTP9 111 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 NUP88Q99567 741 aaPredicted RBP12.44□□□□□ -0.42
EBF3-202ENST00000368648 ANKIB1Q9P2G1 1089 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
EBF3-202ENST00000368648 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 KRT32Q14532 448 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 ZSCAN29Q8IWY8 852 aaPredicted RBP12.44□□□□□ -0.42
EBF3-202ENST00000368648 IP6K1Q92551 441 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 ARHGAP45Q92619 1136 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 ERO1AQ96HE7 468 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 PNMA6EA0A0J9YXQ4 647 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 GOLGA8BA8MQT2 603 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 Q6ZUG5 572 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 INTS4Q96HW7 963 aaKnown RBP12.44□□□□□ -0.42
EBF3-202ENST00000368648 UGGT1Q9NYU2 1555 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 CTAGE5O15320 804 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 CAPZA3Q96KX2 299 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 TANGO6Q9C0B7 1094 aa12.44□□□□□ -0.42
EBF3-202ENST00000368648 GOLIM4O00461 696 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 GABPB1Q06547 395 aaPredicted RBP12.43□□□□□ -0.42
EBF3-202ENST00000368648 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 ANKRD13DQ6ZTN6 518 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 MICU3Q86XE3 530 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 TRPM2O94759 1503 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 ARID5BQ14865 1188 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.42
EBF3-202ENST00000368648 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
EBF3-202ENST00000368648 TMEM94Q12767 1356 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 JAK2O60674 1132 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 USP8P40818 1118 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 ANAPC15P60006 121 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 FAM98CQ17RN3 349 aaKnown RBP12.43□□□□□ -0.42
EBF3-202ENST00000368648 KDM5DQ9BY66 1539 aa12.43□□□□□ -0.42
EBF3-202ENST00000368648 ZEB2O60315 1214 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 CEP57Q86XR8 500 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 NCOA5Q9HCD5 579 aaKnown RBP12.42□□□□□ -0.42
EBF3-202ENST00000368648 TCEAL9Q9UHQ7 104 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 METP08581 1390 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 BLMP54132 1417 aaPredicted RBP12.42□□□□□ -0.42
EBF3-202ENST00000368648 GOLGA6L10A6NI86 522 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 RXRAP19793 462 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 AFMP43652 599 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 PPP2R3AQ06190 1150 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 TTC31Q49AM3 519 aaPredicted RBP12.42□□□□□ -0.42
EBF3-202ENST00000368648 CCDC47Q96A33 483 aaKnown RBP12.42□□□□□ -0.42
EBF3-202ENST00000368648 SNX14Q9Y5W7 946 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 ZNF521Q96K83 1311 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 POLR3AO14802 1390 aaPredicted RBP12.42□□□□□ -0.42
EBF3-202ENST00000368648 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
EBF3-202ENST00000368648 C6orf229H3BNL8 230 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 SSBP05455 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
EBF3-202ENST00000368648 OAS2P29728 719 aaKnown RBP12.42□□□□□ -0.42
EBF3-202ENST00000368648 GYS2P54840 703 aa12.42□□□□□ -0.42
EBF3-202ENST00000368648 NR1I2O75469 434 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 SEC31AO94979 1220 aaKnown RBP12.41□□□□□ -0.42
EBF3-202ENST00000368648 APOBRQ0VD83 1088 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 NMIQ13287 307 aaPredicted RBP12.41□□□□□ -0.42
EBF3-202ENST00000368648 LDHAL6AQ6ZMR3 332 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 CCDC113Q9H0I3 377 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 ZHX3Q9H4I2 956 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 JADE2Q9NQC1 790 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 LONRF3Q496Y0 759 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 TRMT2AQ8IZ69 625 aaKnown RBP12.41□□□□□ -0.42
EBF3-202ENST00000368648 CACTINQ8WUQ7 758 aaKnown RBP12.41□□□□□ -0.42
EBF3-202ENST00000368648 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
EBF3-202ENST00000368648 TEX13AQ9BXU3 409 aaPredicted RBP12.41□□□□□ -0.42
EBF3-202ENST00000368648 SYKP43405 635 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 ZSCAN26Q16670 478 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 KIAA1524Q8TCG1 905 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 RPGRQ92834 1020 aaKnown RBP12.41□□□□□ -0.42
EBF3-202ENST00000368648 ERVK-7P63135 1459 aa12.41□□□□□ -0.42
EBF3-202ENST00000368648 CCDC150Q8NCX0 1101 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms