RNA–Protein interactions for RNA: ENST00000368279.7

PMF1-203, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-203ENST00000368279 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
PMF1-203ENST00000368279 CFAP44Q96MT7 982 aa16.45■□□□□ 0.22
PMF1-203ENST00000368279 GBA2Q9HCG7 927 aaPredicted RBP16.45■□□□□ 0.22
PMF1-203ENST00000368279 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
PMF1-203ENST00000368279 CASP8AP2Q9UKL3 1982 aa16.45■□□□□ 0.22
PMF1-203ENST00000368279 COL4A1P02462 1669 aa16.44■□□□□ 0.22
PMF1-203ENST00000368279 FAM155AB1AL88 458 aaPredicted RBP16.44■□□□□ 0.22
PMF1-203ENST00000368279 ADM5C9JUS6 153 aa16.44■□□□□ 0.22
PMF1-203ENST00000368279 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
PMF1-203ENST00000368279 ZC3H12CQ9C0D7 883 aaKnown RBP16.44■□□□□ 0.22
PMF1-203ENST00000368279 MYBBP1AQ9BQG0 1328 aaKnown RBP16.44■□□□□ 0.22
PMF1-203ENST00000368279 SLC34A2O95436 690 aa16.43■□□□□ 0.22
PMF1-203ENST00000368279 VIL1P09327 827 aaKnown RBP16.43■□□□□ 0.22
PMF1-203ENST00000368279 ZBTB38Q8NAP3 1195 aaPredicted RBP16.43■□□□□ 0.22
PMF1-203ENST00000368279 CCDC102AQ96A19 550 aa16.43■□□□□ 0.22
PMF1-203ENST00000368279 ZNF157P51786 506 aaPredicted RBP16.42■□□□□ 0.22
PMF1-203ENST00000368279 WDR43Q15061 677 aaKnown RBP eCLIP16.42■□□□□ 0.22
PMF1-203ENST00000368279 KIF4BQ2VIQ3 1234 aa16.42■□□□□ 0.22
PMF1-203ENST00000368279 RIC3Q7Z5B4 369 aa16.42■□□□□ 0.22
PMF1-203ENST00000368279 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
PMF1-203ENST00000368279 PODXL2Q9NZ53 605 aa16.42■□□□□ 0.22
PMF1-203ENST00000368279 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
PMF1-203ENST00000368279 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
PMF1-203ENST00000368279 G3V3G9 751 aa16.41■□□□□ 0.22
PMF1-203ENST00000368279 KIF23Q02241 960 aaPredicted RBP16.41■□□□□ 0.22
PMF1-203ENST00000368279 DCAF8Q5TAQ9 597 aa16.41■□□□□ 0.22
PMF1-203ENST00000368279 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
PMF1-203ENST00000368279 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
PMF1-203ENST00000368279 SAGE1Q9NXZ1 904 aa16.41■□□□□ 0.22
PMF1-203ENST00000368279 ANKIB1Q9P2G1 1089 aa16.41■□□□□ 0.22
PMF1-203ENST00000368279 UFL1O94874 794 aa16.4■□□□□ 0.22
PMF1-203ENST00000368279 HSP90B1P14625 803 aaKnown RBP16.4■□□□□ 0.22
PMF1-203ENST00000368279 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
PMF1-203ENST00000368279 GGA3Q9NZ52 723 aa16.4■□□□□ 0.22
PMF1-203ENST00000368279 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
PMF1-203ENST00000368279 GOLGA2Q08379 1002 aa16.39■□□□□ 0.21
PMF1-203ENST00000368279 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
PMF1-203ENST00000368279 ASTN2O75129 1339 aaPredicted RBP16.39■□□□□ 0.21
PMF1-203ENST00000368279 TRPA1O75762 1119 aa16.38■□□□□ 0.21
PMF1-203ENST00000368279 ZNF853P0CG23 659 aa16.38■□□□□ 0.21
PMF1-203ENST00000368279 ZNF280AP59817 542 aaPredicted RBP16.38■□□□□ 0.21
PMF1-203ENST00000368279 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
PMF1-203ENST00000368279 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
PMF1-203ENST00000368279 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
PMF1-203ENST00000368279 AGBL3Q8NEM8 1001 aa16.38■□□□□ 0.21
PMF1-203ENST00000368279 MYD88Q99836 296 aa16.38■□□□□ 0.21
PMF1-203ENST00000368279 SCN9AQ15858 1988 aa16.38■□□□□ 0.21
PMF1-203ENST00000368279 ELL2O00472 640 aaPredicted RBP16.37■□□□□ 0.21
PMF1-203ENST00000368279 PDE8AO60658 829 aa16.37■□□□□ 0.21
PMF1-203ENST00000368279 PCCAP05165 728 aaPredicted RBP16.37■□□□□ 0.21
PMF1-203ENST00000368279 SLC10A3P09131 477 aa16.37■□□□□ 0.21
PMF1-203ENST00000368279 SCARF1Q14162 830 aa16.37■□□□□ 0.21
PMF1-203ENST00000368279 RSBN1LQ6PCB5 846 aaPredicted RBP16.37■□□□□ 0.21
PMF1-203ENST00000368279 CDCA5Q96FF9 252 aa16.37■□□□□ 0.21
PMF1-203ENST00000368279 CSRNP1Q96S65 589 aa16.37■□□□□ 0.21
PMF1-203ENST00000368279 ANGEL2Q5VTE6 544 aaKnown RBP16.36■□□□□ 0.21
PMF1-203ENST00000368279 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
PMF1-203ENST00000368279 CCDC85AQ96PX6 553 aaPredicted RBP16.36■□□□□ 0.21
PMF1-203ENST00000368279 ANKRD18AQ8IVF6 992 aa16.35■□□□□ 0.21
PMF1-203ENST00000368279 GMLQ99445 158 aa16.35■□□□□ 0.21
PMF1-203ENST00000368279 IFT57Q9NWB7 429 aa16.35■□□□□ 0.21
PMF1-203ENST00000368279 CWC25Q9NXE8 425 aaPredicted RBP16.35■□□□□ 0.21
PMF1-203ENST00000368279 ZNF609O15014 1411 aa16.35■□□□□ 0.21
PMF1-203ENST00000368279 USP17L8P0C7I0 530 aa16.34■□□□□ 0.21
PMF1-203ENST00000368279 PODNQ7Z5L7 613 aa16.34■□□□□ 0.21
PMF1-203ENST00000368279 REM2Q8IYK8 340 aaPredicted RBP16.34■□□□□ 0.21
PMF1-203ENST00000368279 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
PMF1-203ENST00000368279 MYOZ2Q9NPC6 264 aa16.34■□□□□ 0.21
PMF1-203ENST00000368279 XDHP47989 1333 aa16.34■□□□□ 0.21
PMF1-203ENST00000368279 USP17L3A6NCW0 530 aa16.33■□□□□ 0.2
PMF1-203ENST00000368279 USP17L4A6NCW7 530 aa16.33■□□□□ 0.2
PMF1-203ENST00000368279 ATP2B4P23634 1241 aa16.33■□□□□ 0.2
PMF1-203ENST00000368279 GNAI1P63096 354 aa16.33■□□□□ 0.2
PMF1-203ENST00000368279 FKBP1BP68106 108 aa16.33■□□□□ 0.2
PMF1-203ENST00000368279 USP17L1Q7RTZ2 530 aa16.33■□□□□ 0.2
PMF1-203ENST00000368279 RASAL3Q86YV0 1011 aa16.33■□□□□ 0.2
PMF1-203ENST00000368279 APAF1O14727 1248 aa16.32■□□□□ 0.2
PMF1-203ENST00000368279 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
PMF1-203ENST00000368279 CALD1Q05682 793 aaKnown RBP16.32■□□□□ 0.2
PMF1-203ENST00000368279 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
PMF1-203ENST00000368279 PITPNM2Q9BZ72 1349 aa16.32■□□□□ 0.2
PMF1-203ENST00000368279 AKAP11Q9UKA4 1901 aa16.32■□□□□ 0.2
PMF1-203ENST00000368279 SCAF8Q9UPN6 1271 aaKnown RBP16.32■□□□□ 0.2
PMF1-203ENST00000368279 WTIPA6NIX2 430 aaPredicted RBP16.31■□□□□ 0.2
PMF1-203ENST00000368279 CCDC30Q5VVM6 783 aa16.31■□□□□ 0.2
PMF1-203ENST00000368279 CDC5LQ99459 802 aaKnown RBP16.31■□□□□ 0.2
PMF1-203ENST00000368279 CTSWP56202 376 aa16.3■□□□□ 0.2
PMF1-203ENST00000368279 SOX10P56693 466 aa16.3■□□□□ 0.2
PMF1-203ENST00000368279 MOB2Q70IA6 237 aa16.3■□□□□ 0.2
PMF1-203ENST00000368279 CTU1Q7Z7A3 348 aaKnown RBP16.3■□□□□ 0.2
PMF1-203ENST00000368279 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
PMF1-203ENST00000368279 BSDC1Q9NW68 430 aaPredicted RBP16.3■□□□□ 0.2
PMF1-203ENST00000368279 MAP3K2Q9Y2U5 619 aa16.3■□□□□ 0.2
PMF1-203ENST00000368279 PSME4Q14997 1843 aa16.3■□□□□ 0.2
PMF1-203ENST00000368279 UBE2Q2LH0YL09 131 aa16.29■□□□□ 0.2
PMF1-203ENST00000368279 NBPF9Q3BBW0 867 aa16.29■□□□□ 0.2
PMF1-203ENST00000368279 PRAMEF18Q5VWM3 479 aa16.29■□□□□ 0.2
PMF1-203ENST00000368279 TTLL11Q8NHH1 800 aa16.29■□□□□ 0.2
PMF1-203ENST00000368279 MINPP1Q9UNW1 487 aa16.29■□□□□ 0.2
PMF1-203ENST00000368279 PAPPA2Q9BXP8 1791 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms