RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PTPRCP08575 1304 aa12.5□□□□□ -0.41
CD48-202ENST00000368046 SNED1Q8TER0 1413 aa12.5□□□□□ -0.41
CD48-202ENST00000368046 ARFGEF2Q9Y6D5 1785 aa12.5□□□□□ -0.41
CD48-202ENST00000368046 FZD9O00144 591 aa12.49□□□□□ -0.41
CD48-202ENST00000368046 TOMM70O94826 608 aa12.49□□□□□ -0.41
CD48-202ENST00000368046 DDNO94850 711 aaPredicted RBP12.49□□□□□ -0.41
CD48-202ENST00000368046 CSF1RP07333 972 aa12.49□□□□□ -0.41
CD48-202ENST00000368046 BRPF1P55201 1214 aaPredicted RBP12.49□□□□□ -0.41
CD48-202ENST00000368046 CTSWP56202 376 aa12.49□□□□□ -0.41
CD48-202ENST00000368046 SLC51AQ86UW1 340 aa12.49□□□□□ -0.41
CD48-202ENST00000368046 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
CD48-202ENST00000368046 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
CD48-202ENST00000368046 CCDC85AQ96PX6 553 aaPredicted RBP12.49□□□□□ -0.41
CD48-202ENST00000368046 NSFL1CQ9UNZ2 370 aaKnown RBP12.49□□□□□ -0.41
CD48-202ENST00000368046 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
CD48-202ENST00000368046 ANKRD18AQ8IVF6 992 aa12.48□□□□□ -0.41
CD48-202ENST00000368046 CDC5LQ99459 802 aaKnown RBP12.48□□□□□ -0.41
CD48-202ENST00000368046 SMC4Q9NTJ3 1288 aa12.48□□□□□ -0.41
CD48-202ENST00000368046 C9orf78Q9NZ63 289 aaPredicted RBP12.48□□□□□ -0.41
CD48-202ENST00000368046 SBF1O95248 1867 aa12.48□□□□□ -0.41
CD48-202ENST00000368046 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
CD48-202ENST00000368046 POTECB2RU33 542 aa12.47□□□□□ -0.41
CD48-202ENST00000368046 GRM8O00222 908 aa12.47□□□□□ -0.41
CD48-202ENST00000368046 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
CD48-202ENST00000368046 RARSP54136 660 aaKnown RBP12.47□□□□□ -0.41
CD48-202ENST00000368046 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
CD48-202ENST00000368046 BCL2L13Q9BXK5 485 aa12.47□□□□□ -0.41
CD48-202ENST00000368046 GREM2Q9H772 168 aa12.47□□□□□ -0.41
CD48-202ENST00000368046 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
CD48-202ENST00000368046 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
CD48-202ENST00000368046 GPSM2P81274 684 aa12.46□□□□□ -0.41
CD48-202ENST00000368046 FOXO4P98177 505 aa12.46□□□□□ -0.41
CD48-202ENST00000368046 KIAA2012Q0VF49 1180 aa12.46□□□□□ -0.41
CD48-202ENST00000368046 AOC3Q16853 763 aa12.46□□□□□ -0.41
CD48-202ENST00000368046 WASHC4Q2M389 1173 aa12.46□□□□□ -0.41
CD48-202ENST00000368046 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
CD48-202ENST00000368046 PODXL2Q9NZ53 605 aa12.46□□□□□ -0.41
CD48-202ENST00000368046 NOB1Q9ULX3 412 aaKnown RBP12.46□□□□□ -0.41
CD48-202ENST00000368046 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 C6orf229H3BNL8 230 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 ITGA6P23229 1130 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 GPC2Q8N158 579 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 RBM46Q8TBY0 533 aaKnown RBP12.45□□□□□ -0.42
CD48-202ENST00000368046 ARHGAP45Q92619 1136 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 EYA3Q99504 573 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 ANKIB1Q9P2G1 1089 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 POLLQ9UGP5 575 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 ZNRF3Q9ULT6 936 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
CD48-202ENST00000368046 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
CD48-202ENST00000368046 UTYO14607 1347 aa12.44□□□□□ -0.42
CD48-202ENST00000368046 IGHMBP2P38935 993 aaKnown RBP12.44□□□□□ -0.42
CD48-202ENST00000368046 LMBR1LQ6UX01 489 aa12.44□□□□□ -0.42
CD48-202ENST00000368046 TBC1D16Q8TBP0 767 aa12.44□□□□□ -0.42
CD48-202ENST00000368046 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
CD48-202ENST00000368046 API5Q9BZZ5 524 aaKnown RBP12.44□□□□□ -0.42
CD48-202ENST00000368046 ZC3H12CQ9C0D7 883 aaKnown RBP12.44□□□□□ -0.42
CD48-202ENST00000368046 MINPP1Q9UNW1 487 aa12.44□□□□□ -0.42
CD48-202ENST00000368046 ZBED9Q6R2W3 1325 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 CACNA1SQ13698 1873 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 IQCA1LA6NCM1 817 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 RIMBP2O15034 1052 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 NBPF7P0C2Y1 421 aaPredicted RBP12.43□□□□□ -0.42
CD48-202ENST00000368046 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
CD48-202ENST00000368046 EPHA10Q5JZY3 1008 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 MPHOSPH8Q99549 860 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 USP44Q9H0E7 712 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 GGA1Q9UJY5 639 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 GJA3Q9Y6H8 435 aa12.43□□□□□ -0.42
CD48-202ENST00000368046 XDHP47989 1333 aa12.42□□□□□ -0.42
CD48-202ENST00000368046 ZNF541Q9H0D2 1346 aa12.42□□□□□ -0.42
CD48-202ENST00000368046 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
CD48-202ENST00000368046 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
CD48-202ENST00000368046 CCT4P50991 539 aaKnown RBP12.42□□□□□ -0.42
CD48-202ENST00000368046 CXCL9Q07325 125 aa12.42□□□□□ -0.42
CD48-202ENST00000368046 FSTL1Q12841 308 aa12.42□□□□□ -0.42
CD48-202ENST00000368046 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
CD48-202ENST00000368046 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
CD48-202ENST00000368046 ANKRD2Q9GZV1 360 aa12.42□□□□□ -0.42
CD48-202ENST00000368046 LAMB2P55268 1798 aa12.42□□□□□ -0.42
CD48-202ENST00000368046 BCAR3O75815 825 aa12.41□□□□□ -0.42
CD48-202ENST00000368046 TNIP1Q15025 636 aa12.41□□□□□ -0.42
CD48-202ENST00000368046 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
CD48-202ENST00000368046 CCDC88AQ3V6T2 1871 aa12.41□□□□□ -0.42
CD48-202ENST00000368046 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
CD48-202ENST00000368046 KAZALD1Q96I82 304 aa12.41□□□□□ -0.42
CD48-202ENST00000368046 BMP2KQ9NSY1 1161 aaPredicted RBP12.41□□□□□ -0.42
CD48-202ENST00000368046 HACL1Q9UJ83 578 aa12.41□□□□□ -0.42
CD48-202ENST00000368046 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
CD48-202ENST00000368046 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
CD48-202ENST00000368046 KIF16BQ96L93 1317 aa12.4□□□□□ -0.42
CD48-202ENST00000368046 G3V3G9 751 aa12.4□□□□□ -0.42
CD48-202ENST00000368046 UFL1O94874 794 aa12.4□□□□□ -0.42
CD48-202ENST00000368046 DCAF8Q5TAQ9 597 aa12.4□□□□□ -0.42
CD48-202ENST00000368046 LDHAL6AQ6ZMR3 332 aa12.4□□□□□ -0.42
CD48-202ENST00000368046 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
CD48-202ENST00000368046 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.42
CD48-202ENST00000368046 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms