RNA–Protein interactions for RNA: ENST00000367881.9

TMCO1-201, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-201ENST00000367881 RAB11FIP3O75154 756 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
TMCO1-201ENST00000367881 MTX1Q13505 466 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 EPHA10Q5JZY3 1008 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 USPL1Q5W0Q7 1092 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
TMCO1-201ENST00000367881 SSH3Q8TE77 659 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 BCL2L12Q9HB09 334 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 ANO2Q9NQ90 1003 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
TMCO1-201ENST00000367881 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
TMCO1-201ENST00000367881 SRGAP3O43295 1099 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 ZPR1O75312 459 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 RFC4P35249 363 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 POLA2Q14181 598 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 UVSSAQ2YD98 709 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
TMCO1-201ENST00000367881 TMEM87AQ8NBN3 555 aa12.88□□□□□ -0.35
TMCO1-201ENST00000367881 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
TMCO1-201ENST00000367881 LETM1O95202 739 aaPredicted RBP12.87□□□□□ -0.35
TMCO1-201ENST00000367881 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
TMCO1-201ENST00000367881 FAM89AQ96GI7 184 aa12.87□□□□□ -0.35
TMCO1-201ENST00000367881 USP42Q9H9J4 1324 aaKnown RBP12.87□□□□□ -0.35
TMCO1-201ENST00000367881 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
TMCO1-201ENST00000367881 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
TMCO1-201ENST00000367881 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
TMCO1-201ENST00000367881 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
TMCO1-201ENST00000367881 CAMKK2Q96RR4 588 aa12.86□□□□□ -0.35
TMCO1-201ENST00000367881 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.86□□□□□ -0.35
TMCO1-201ENST00000367881 HSPA4P34932 840 aa12.86□□□□□ -0.35
TMCO1-201ENST00000367881 FOXO4P98177 505 aa12.86□□□□□ -0.35
TMCO1-201ENST00000367881 RABL6Q3YEC7 729 aaPredicted RBP12.86□□□□□ -0.35
TMCO1-201ENST00000367881 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
TMCO1-201ENST00000367881 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
TMCO1-201ENST00000367881 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
TMCO1-201ENST00000367881 TRMT112Q9UI30 125 aaKnown RBP12.86□□□□□ -0.35
TMCO1-201ENST00000367881 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
TMCO1-201ENST00000367881 CDHR2Q9BYE9 1310 aa12.85□□□□□ -0.35
TMCO1-201ENST00000367881 TBC1D9BQ66K14 1250 aa12.85□□□□□ -0.35
TMCO1-201ENST00000367881 SYNE4Q8N205 404 aa12.85□□□□□ -0.35
TMCO1-201ENST00000367881 FAM177BA6PVY3 158 aa12.85□□□□□ -0.35
TMCO1-201ENST00000367881 BAG6P46379 1132 aa12.85□□□□□ -0.35
TMCO1-201ENST00000367881 RILPL2Q969X0 211 aa12.85□□□□□ -0.35
TMCO1-201ENST00000367881 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
TMCO1-201ENST00000367881 PALD1Q9ULE6 856 aa12.85□□□□□ -0.35
TMCO1-201ENST00000367881 RAD50Q92878 1312 aa12.84□□□□□ -0.35
TMCO1-201ENST00000367881 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
TMCO1-201ENST00000367881 ATP6V1DQ9Y5K8 247 aa12.84□□□□□ -0.35
TMCO1-201ENST00000367881 DYNC1I1O14576 645 aa12.84□□□□□ -0.35
TMCO1-201ENST00000367881 NTSR2O95665 410 aa12.84□□□□□ -0.35
TMCO1-201ENST00000367881 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
TMCO1-201ENST00000367881 BICDL1Q6ZP65 573 aa12.84□□□□□ -0.35
TMCO1-201ENST00000367881 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
TMCO1-201ENST00000367881 TAF1P21675 1872 aa12.83□□□□□ -0.36
TMCO1-201ENST00000367881 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
TMCO1-201ENST00000367881 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
TMCO1-201ENST00000367881 HSP90AB4PQ58FF6 505 aa12.83□□□□□ -0.36
TMCO1-201ENST00000367881 SASS6Q6UVJ0 657 aa12.83□□□□□ -0.36
TMCO1-201ENST00000367881 DEFB132Q7Z7B7 95 aa12.83□□□□□ -0.36
TMCO1-201ENST00000367881 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.36
TMCO1-201ENST00000367881 SURF6O75683 361 aaKnown RBP12.82□□□□□ -0.36
TMCO1-201ENST00000367881 PDIA4P13667 645 aaKnown RBP12.82□□□□□ -0.36
TMCO1-201ENST00000367881 KIAA2012Q0VF49 1180 aa12.82□□□□□ -0.36
TMCO1-201ENST00000367881 CCDC183Q5T5S1 534 aa12.82□□□□□ -0.36
TMCO1-201ENST00000367881 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
TMCO1-201ENST00000367881 R3HCC1Q9Y3T6 440 aaKnown RBP12.82□□□□□ -0.36
TMCO1-201ENST00000367881 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.82□□□□□ -0.36
TMCO1-201ENST00000367881 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
TMCO1-201ENST00000367881 PA2G4Q9UQ80 394 aaKnown RBP12.82□□□□□ -0.36
TMCO1-201ENST00000367881 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
TMCO1-201ENST00000367881 PTMAP06454 111 aaKnown RBP12.81□□□□□ -0.36
TMCO1-201ENST00000367881 GYS1P13807 737 aa12.81□□□□□ -0.36
TMCO1-201ENST00000367881 RFX5P48382 616 aaPredicted RBP12.81□□□□□ -0.36
TMCO1-201ENST00000367881 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
TMCO1-201ENST00000367881 CNTROBQ8N137 903 aa12.81□□□□□ -0.36
TMCO1-201ENST00000367881 KIF1BPQ96EK5 621 aa12.81□□□□□ -0.36
TMCO1-201ENST00000367881 SGSM2O43147 1006 aa12.81□□□□□ -0.36
TMCO1-201ENST00000367881 PDE8AO60658 829 aa12.81□□□□□ -0.36
TMCO1-201ENST00000367881 TSHZ3Q63HK5 1081 aa12.81□□□□□ -0.36
TMCO1-201ENST00000367881 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
TMCO1-201ENST00000367881 CCDC125Q86Z20 511 aa12.81□□□□□ -0.36
TMCO1-201ENST00000367881 KLHDC4Q8TBB5 520 aa12.81□□□□□ -0.36
TMCO1-201ENST00000367881 TTC41PQ6P2S7 1318 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
TMCO1-201ENST00000367881 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 CSF1RP07333 972 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 UQCRHP07919 91 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-201ENST00000367881 CTSWP56202 376 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 UBE2HP62256 183 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 NFIXQ14938 502 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 FLAD1Q8NFF5 587 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 CARMIL3Q8ND23 1372 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 PNPLA7Q6ZV29 1317 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 ZSCAN22P10073 491 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-201ENST00000367881 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
TMCO1-201ENST00000367881 FOXD4L5Q5VV16 416 aaPredicted RBP12.8□□□□□ -0.36
TMCO1-201ENST00000367881 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
TMCO1-201ENST00000367881 TTLL11Q8NHH1 800 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms