RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 NUDT7P0C024 238 aa11.78□□□□□ -0.52
VTA1-201ENST00000367621 LMBR1LQ6UX01 489 aa11.78□□□□□ -0.52
VTA1-201ENST00000367621 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
VTA1-201ENST00000367621 SALL3Q9BXA9 1300 aa11.78□□□□□ -0.52
VTA1-201ENST00000367621 EP400Q96L91 3159 aa11.77□□□□□ -0.52
VTA1-201ENST00000367621 RAB11FIP3O75154 756 aa11.77□□□□□ -0.53
VTA1-201ENST00000367621 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.53
VTA1-201ENST00000367621 NTSR2O95665 410 aa11.77□□□□□ -0.53
VTA1-201ENST00000367621 PTPN12Q05209 780 aaKnown RBP11.77□□□□□ -0.53
VTA1-201ENST00000367621 TPRNQ4KMQ1 711 aa11.77□□□□□ -0.53
VTA1-201ENST00000367621 USPL1Q5W0Q7 1092 aa11.77□□□□□ -0.53
VTA1-201ENST00000367621 NPM2Q86SE8 214 aaKnown RBP11.77□□□□□ -0.53
VTA1-201ENST00000367621 PLEKHM2Q8IWE5 1019 aa11.77□□□□□ -0.53
VTA1-201ENST00000367621 COPRSQ9NQ92 184 aa11.77□□□□□ -0.53
VTA1-201ENST00000367621 PCDHGA4Q9Y5G9 962 aa11.77□□□□□ -0.53
VTA1-201ENST00000367621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.77□□□□□ -0.53
VTA1-201ENST00000367621 APBB1O00213 710 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 ZNF827Q17R98 1081 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 PARP10Q53GL7 1025 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 TRAPPC3LQ5T215 181 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 TBC1D9BQ66K14 1250 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 KLHDC4Q8TBB5 520 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 RHPN1Q8TCX5 695 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 AK7Q96M32 723 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 LRRCC1Q9C099 1032 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 TRMT112Q9UI30 125 aaKnown RBP11.76□□□□□ -0.53
VTA1-201ENST00000367621 NIP7Q9Y221 180 aaKnown RBP eCLIP11.76□□□□□ -0.53
VTA1-201ENST00000367621 C4BP0C0L5 1744 aa11.76□□□□□ -0.53
VTA1-201ENST00000367621 IRS4O14654 1257 aaPredicted RBP11.75□□□□□ -0.53
VTA1-201ENST00000367621 SASH1O94885 1247 aa11.75□□□□□ -0.53
VTA1-201ENST00000367621 POTEEQ6S8J3 1075 aa11.75□□□□□ -0.53
VTA1-201ENST00000367621 CAMKK2Q96RR4 588 aa11.75□□□□□ -0.53
VTA1-201ENST00000367621 UTP14AQ9BVJ6 771 aaKnown RBP11.75□□□□□ -0.53
VTA1-201ENST00000367621 LHX6Q9UPM6 363 aa11.75□□□□□ -0.53
VTA1-201ENST00000367621 ZNF652Q9Y2D9 606 aa11.75□□□□□ -0.53
VTA1-201ENST00000367621 USP42Q9H9J4 1324 aaKnown RBP11.75□□□□□ -0.53
VTA1-201ENST00000367621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
VTA1-201ENST00000367621 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
VTA1-201ENST00000367621 SSFA2P28290 1259 aa11.74□□□□□ -0.53
VTA1-201ENST00000367621 C8orf34Q49A92 452 aa11.74□□□□□ -0.53
VTA1-201ENST00000367621 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
VTA1-201ENST00000367621 TTLL11Q8NHH1 800 aa11.74□□□□□ -0.53
VTA1-201ENST00000367621 BACH2Q9BYV9 841 aa11.74□□□□□ -0.53
VTA1-201ENST00000367621 ZPR1O75312 459 aa11.73□□□□□ -0.53
VTA1-201ENST00000367621 PHF14O94880 888 aa11.73□□□□□ -0.53
VTA1-201ENST00000367621 CTSWP56202 376 aa11.73□□□□□ -0.53
VTA1-201ENST00000367621 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
VTA1-201ENST00000367621 SH3TC1Q8TE82 1336 aa11.73□□□□□ -0.53
VTA1-201ENST00000367621 KIF1BPQ96EK5 621 aa11.73□□□□□ -0.53
VTA1-201ENST00000367621 OSBPL3Q9H4L5 887 aa11.73□□□□□ -0.53
VTA1-201ENST00000367621 IL1RAPL2Q9NP60 686 aa11.73□□□□□ -0.53
VTA1-201ENST00000367621 STAP2Q9UGK3 403 aa11.73□□□□□ -0.53
VTA1-201ENST00000367621 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
VTA1-201ENST00000367621 FAM177BA6PVY3 158 aa11.72□□□□□ -0.53
VTA1-201ENST00000367621 PDE8AO60658 829 aa11.72□□□□□ -0.53
VTA1-201ENST00000367621 GYS1P13807 737 aa11.72□□□□□ -0.53
VTA1-201ENST00000367621 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
VTA1-201ENST00000367621 RFC4P35249 363 aa11.72□□□□□ -0.53
VTA1-201ENST00000367621 FAM161AQ3B820 660 aa11.72□□□□□ -0.53
VTA1-201ENST00000367621 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
VTA1-201ENST00000367621 SIL1Q9H173 461 aa11.72□□□□□ -0.53
VTA1-201ENST00000367621 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
VTA1-201ENST00000367621 PDE1AP54750 535 aa11.71□□□□□ -0.53
VTA1-201ENST00000367621 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.53
VTA1-201ENST00000367621 G3BP1Q13283 466 aaKnown RBP eCLIP11.71□□□□□ -0.534e-7■■□□□ 14.2
VTA1-201ENST00000367621 NFIXQ14938 502 aa11.71□□□□□ -0.53
VTA1-201ENST00000367621 EZH2Q15910 746 aaKnown RBP11.71□□□□□ -0.53
VTA1-201ENST00000367621 ERFEQ4G0M1 354 aa11.71□□□□□ -0.53
VTA1-201ENST00000367621 BICDL1Q6ZP65 573 aa11.71□□□□□ -0.53
VTA1-201ENST00000367621 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
VTA1-201ENST00000367621 ERC1Q8IUD2 1116 aa11.71□□□□□ -0.53
VTA1-201ENST00000367621 TMC2Q8TDI7 906 aa11.71□□□□□ -0.53
VTA1-201ENST00000367621 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
VTA1-201ENST00000367621 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.53
VTA1-201ENST00000367621 GREM2Q9H772 168 aa11.71□□□□□ -0.53
VTA1-201ENST00000367621 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
VTA1-201ENST00000367621 BCORQ6W2J9 1755 aa11.71□□□□□ -0.54
VTA1-201ENST00000367621 TNS1Q9HBL0 1735 aaKnown RBP11.71□□□□□ -0.54
VTA1-201ENST00000367621 SCN7AQ01118 1682 aa11.71□□□□□ -0.54
VTA1-201ENST00000367621 NUP98P52948 1817 aa11.7□□□□□ -0.54
VTA1-201ENST00000367621 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
VTA1-201ENST00000367621 CIAO1O76071 339 aa11.7□□□□□ -0.54
VTA1-201ENST00000367621 HMGB2P26583 209 aaKnown RBP11.7□□□□□ -0.54
VTA1-201ENST00000367621 TM4SF1P30408 202 aa11.7□□□□□ -0.54
VTA1-201ENST00000367621 LRRC24Q50LG9 513 aa11.7□□□□□ -0.54
VTA1-201ENST00000367621 BMP2KLQ5H9B9 411 aa11.7□□□□□ -0.54
VTA1-201ENST00000367621 TTC22Q5TAA0 569 aa11.7□□□□□ -0.54
VTA1-201ENST00000367621 COL23A1Q86Y22 540 aaPredicted RBP11.7□□□□□ -0.54
VTA1-201ENST00000367621 EAF2Q96CJ1 260 aaPredicted RBP11.7□□□□□ -0.54
VTA1-201ENST00000367621 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
VTA1-201ENST00000367621 SETDB2Q96T68 719 aa11.7□□□□□ -0.54
VTA1-201ENST00000367621 ABCC12Q96J65 1359 aa11.69□□□□□ -0.54
VTA1-201ENST00000367621 EYA2O00167 538 aa11.69□□□□□ -0.54
VTA1-201ENST00000367621 MX1P20591 662 aa11.69□□□□□ -0.54
VTA1-201ENST00000367621 ITGA6P23229 1130 aa11.69□□□□□ -0.54
VTA1-201ENST00000367621 TFCP2Q12800 502 aa11.69□□□□□ -0.54
VTA1-201ENST00000367621 OS9Q13438 667 aaPredicted RBP11.69□□□□□ -0.54
VTA1-201ENST00000367621 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
VTA1-201ENST00000367621 ANO8Q9HCE9 1232 aaPredicted RBP11.69□□□□□ -0.54
VTA1-201ENST00000367621 CHMP3Q9Y3E7 222 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms