RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 RAD50Q92878 1312 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 ZNF76P36508 570 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 MTIF2P46199 727 aaKnown RBP13.19□□□□□ -0.3
RD3-201ENST00000367002 TIMM10P62072 90 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 KLHDC4Q8TBB5 520 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 ZCRB1Q8TBF4 217 aaKnown RBP13.19□□□□□ -0.3
RD3-201ENST00000367002 TCP11L1Q9NUJ3 509 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 ANKIB1Q9P2G1 1089 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 PAFAH1B1P43034 410 aa13.18□□□□□ -0.3
RD3-201ENST00000367002 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
RD3-201ENST00000367002 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
RD3-201ENST00000367002 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
RD3-201ENST00000367002 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
RD3-201ENST00000367002 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
RD3-201ENST00000367002 USO1O60763 962 aaKnown RBP13.18□□□□□ -0.3
RD3-201ENST00000367002 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
RD3-201ENST00000367002 KCNA6P17658 529 aa13.18□□□□□ -0.3
RD3-201ENST00000367002 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
RD3-201ENST00000367002 KRT222Q8N1A0 295 aa13.18□□□□□ -0.3
RD3-201ENST00000367002 USP19O94966 1318 aa13.18□□□□□ -0.3
RD3-201ENST00000367002 RTN1Q16799 776 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 IP6K1Q92551 441 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 RTL1A6NKG5 1358 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 KIF21AQ7Z4S6 1674 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
RD3-201ENST00000367002 ZPR1O75312 459 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 KIF5BP33176 963 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 TAX1BP1Q86VP1 789 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 ABCC4O15439 1325 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
RD3-201ENST00000367002 SLU7O95391 586 aaKnown RBP13.17□□□□□ -0.3
RD3-201ENST00000367002 LGR6Q9HBX8 967 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 CALCOCO1Q9P1Z2 691 aa13.17□□□□□ -0.3
RD3-201ENST00000367002 MPHOSPH10O00566 681 aaKnown RBP13.16□□□□□ -0.3
RD3-201ENST00000367002 ADAMTS2O95450 1211 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 BRD1O95696 1058 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 IFNKQ9P0W0 207 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
RD3-201ENST00000367002 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 PKP1Q13835 747 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 KRT23Q9C075 422 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 VAT1LQ9HCJ6 419 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 ESR2Q92731 530 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 DBNDD2Q9BQY9 259 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 SLC27A2O14975 620 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 CYP7A1P22680 504 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 RPS6KB1P23443 525 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
RD3-201ENST00000367002 FGFR1OPO95684 399 aaKnown RBP13.15□□□□□ -0.3
RD3-201ENST00000367002 HSPA4P34932 840 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 PDE4BQ07343 736 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 SLC4A8Q2Y0W8 1093 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 GAS2L3Q86XJ1 694 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 TSG101Q99816 390 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 SLC4A4Q9Y6R1 1079 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 NEFHP12036 1026 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 TMEM266Q2M3C6 531 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 ARFGAP3Q9NP61 516 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
RD3-201ENST00000367002 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 HOXB7P09629 217 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 RXRAP19793 462 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 MCM3P25205 808 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
RD3-201ENST00000367002 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 USP44Q9H0E7 712 aa13.15□□□□□ -0.3
RD3-201ENST00000367002 C17orf53Q8N3J3 647 aaPredicted RBP13.14□□□□□ -0.31
RD3-201ENST00000367002 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
RD3-201ENST00000367002 KAT14Q9H8E8 782 aa13.14□□□□□ -0.31
RD3-201ENST00000367002 PPP1R12BO60237 982 aaPredicted RBP13.14□□□□□ -0.31
RD3-201ENST00000367002 PYM1Q9BRP8 204 aaKnown RBP13.14□□□□□ -0.31
RD3-201ENST00000367002 AOX1Q06278 1338 aa13.14□□□□□ -0.31
RD3-201ENST00000367002 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
RD3-201ENST00000367002 RRAGBQ5VZM2 374 aa13.14□□□□□ -0.31
RD3-201ENST00000367002 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
RD3-201ENST00000367002 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
RD3-201ENST00000367002 IGSF3O75054 1194 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 BMP15O95972 392 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 TRIM21P19474 475 aaKnown RBP13.13□□□□□ -0.31
RD3-201ENST00000367002 FAM160A1Q05DH4 1040 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 TMEM132AQ24JP5 1023 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 CRACR2BQ8N4Y2 399 aaPredicted RBP13.13□□□□□ -0.31
RD3-201ENST00000367002 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 LMAN1P49257 510 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 AMPD3Q01432 767 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 BRAPQ7Z569 592 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 CALML4Q96GE6 196 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 CHAMP1Q96JM3 812 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 NCOA5Q9HCD5 579 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms