RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CYLC1P35663 651 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 SEPT11Q9NVA2 429 aaKnown RBP13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 ARHGEF10O15013 1369 aa13.78□□□□□ -0.2
CDC42BPA-203ENST00000366766 EIF4A2Q14240 407 aaKnown RBP13.77□□□□□ -0.2
CDC42BPA-203ENST00000366766 MICU3Q86XE3 530 aa13.77□□□□□ -0.2
CDC42BPA-203ENST00000366766 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.2
CDC42BPA-203ENST00000366766 SMARCC1Q92922 1105 aaPredicted RBP13.77□□□□□ -0.2
CDC42BPA-203ENST00000366766 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.2
CDC42BPA-203ENST00000366766 IVLP07476 585 aa13.77□□□□□ -0.2
CDC42BPA-203ENST00000366766 XPCQ01831 940 aaPredicted RBP13.77□□□□□ -0.2
CDC42BPA-203ENST00000366766 SMC1AQ14683 1233 aaKnown RBP13.77□□□□□ -0.21
CDC42BPA-203ENST00000366766 SPHKAPQ2M3C7 1700 aa13.77□□□□□ -0.21
CDC42BPA-203ENST00000366766 PKNOX2Q96KN3 472 aa13.77□□□□□ -0.21
CDC42BPA-203ENST00000366766 ATP10AO60312 1499 aa13.77□□□□□ -0.21
CDC42BPA-203ENST00000366766 KDM4AO75164 1064 aa13.77□□□□□ -0.21
CDC42BPA-203ENST00000366766 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
CDC42BPA-203ENST00000366766 TUBB2AQ13885 445 aa13.77□□□□□ -0.21
CDC42BPA-203ENST00000366766 TUBB2BQ9BVA1 445 aa13.77□□□□□ -0.21
CDC42BPA-203ENST00000366766 PTPRTO14522 1441 aa13.77□□□□□ -0.21
CDC42BPA-203ENST00000366766 ATP2B3Q16720 1220 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 RTN1Q16799 776 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 EXOC1Q9NV70 894 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 UBASH3AP57075 661 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 TERF1P54274 439 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 PSMA7O14818 248 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 PAG1Q9NWQ8 432 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 BICDL2A1A5D9 508 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 XRCC6P12956 609 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 CEP112Q8N8E3 955 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 CROCC2H7BZ55 1655 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 IQGAP3Q86VI3 1631 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 CCT2P78371 535 aaKnown RBP13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 KDM2BQ8NHM5 1336 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 PPP2R5BQ15173 497 aa13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 DDX46Q7L014 1031 aaKnown RBP13.76□□□□□ -0.21
CDC42BPA-203ENST00000366766 USP48Q86UV5 1035 aa13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 CCDC175P0C221 793 aa13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 DCAF5Q96JK2 942 aa13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 DHX32Q7L7V1 743 aaKnown RBP13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 IFFO1Q0D2I5 559 aa13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 TTC12Q9H892 705 aaPredicted RBP13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 NOLC1Q14978 699 aaKnown RBP eCLIP13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 RUFY3Q7L099 469 aa13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 PRDM15P57071 1507 aaPredicted RBP13.75□□□□□ -0.21
CDC42BPA-203ENST00000366766 SKILP12757 684 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 ABCA8O94911 1581 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 CTAGE9A4FU28 777 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 DYDC1Q8WWB3 177 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 N4BP3O15049 544 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 KRT83P78385 493 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 TYRO3Q06418 890 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 ANO6Q4KMQ2 910 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 USP26Q9BXU7 913 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 TSPY2A6NKD2 308 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 SPTLC2O15270 562 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 SPECC1LQ69YQ0 1117 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 TAX1BP1Q86VP1 789 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 BRF1Q92994 677 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 STMN4Q9H169 189 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 KLF18A0A0U1RQI7 1052 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 MPHOSPH10O00566 681 aaKnown RBP13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 HOOK3Q86VS8 718 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 MPHOSPH6Q99547 160 aaKnown RBP13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 C8orf58Q8NAV2 365 aa13.74□□□□□ -0.21
CDC42BPA-203ENST00000366766 AK9Q5TCS8 1911 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 TRIM75PA6NK02 468 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 A6NNZ2 444 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 TUBB8Q3ZCM7 444 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 ALG1Q9BT22 464 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 CHMLP26374 656 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 CTR9Q6PD62 1173 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 NYXQ9GZU5 481 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 RBM28Q9NW13 759 aaKnown RBP13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 TDRD12Q587J7 1177 aaKnown RBP13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 SLC26A6Q9BXS9 759 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 IFIT1BQ5T764 474 aaKnown RBP13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 FERMT1Q9BQL6 677 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 FAM193AP78312 1265 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 STAT6P42226 847 aa13.73□□□□□ -0.21
CDC42BPA-203ENST00000366766 KRT86O43790 486 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 GNG11P61952 73 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 CCDC40Q4G0X9 1142 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 CNGA4Q8IV77 575 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 PCDH11XQ9BZA7 1347 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 PCDH11YQ9BZA8 1340 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 TRIM47Q96LD4 638 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 TSGA10Q9BZW7 698 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 CNPY2Q9Y2B0 182 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 TBC1D5Q92609 795 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 GLT8D2Q9H1C3 349 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 ATP7BP35670 1465 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 FEZ1Q99689 392 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms