RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 RIMBP2O15034 1052 aa30.08■■■□□ 2.41
SHC1-201ENST00000366442 CNTROBQ8N137 903 aa30.08■■■□□ 2.41
SHC1-201ENST00000366442 E9PSI1 815 aa30.07■■■□□ 2.4
SHC1-201ENST00000366442 UFL1O94874 794 aa30.07■■■□□ 2.4
SHC1-201ENST00000366442 MAP1SQ66K74 1059 aaPredicted RBP30.07■■■□□ 2.4
SHC1-201ENST00000366442 ZC3H12CQ9C0D7 883 aaKnown RBP30.07■■■□□ 2.4
SHC1-201ENST00000366442 DBNDD1Q9H9R9 158 aa30.07■■■□□ 2.4
SHC1-201ENST00000366442 BSDC1Q9NW68 430 aaPredicted RBP30.07■■■□□ 2.4
SHC1-201ENST00000366442 XDHP47989 1333 aa30.06■■■□□ 2.4
SHC1-201ENST00000366442 F6X3S4 739 aa30.06■■■□□ 2.4
SHC1-201ENST00000366442 BEND3Q5T5X7 828 aa30.06■■■□□ 2.4
SHC1-201ENST00000366442 BCL2L13Q9BXK5 485 aa30.06■■■□□ 2.4
SHC1-201ENST00000366442 PCNTO95613 3336 aa30.06■■■□□ 2.4
SHC1-201ENST00000366442 ECE2O60344 883 aa30.05■■■□□ 2.4
SHC1-201ENST00000366442 CSF1RP07333 972 aa30.03■■■□□ 2.4
SHC1-201ENST00000366442 ATP2B4P23634 1241 aa30.03■■■□□ 2.4
SHC1-201ENST00000366442 GPR101Q96P66 508 aaPredicted RBP30.03■■■□□ 2.4
SHC1-201ENST00000366442 TMEM88BA6NKF7 163 aa30.02■■■□□ 2.4
SHC1-201ENST00000366442 PSMD14O00487 310 aa30.02■■■□□ 2.4
SHC1-201ENST00000366442 DOK7Q18PE1 504 aa30.02■■■□□ 2.4
SHC1-201ENST00000366442 DPF2Q92785 391 aa30.02■■■□□ 2.4
SHC1-201ENST00000366442 SLFN5Q08AF3 891 aa30.01■■■□□ 2.39
SHC1-201ENST00000366442 MINPP1Q9UNW1 487 aa30.01■■■□□ 2.39
SHC1-201ENST00000366442 ITGA6P23229 1130 aa30■■■□□ 2.39
SHC1-201ENST00000366442 RPS12P25398 132 aaKnown RBP30■■■□□ 2.39
SHC1-201ENST00000366442 IGHMBP2P38935 993 aaKnown RBP30■■■□□ 2.39
SHC1-201ENST00000366442 CNOT7Q9UIV1 285 aaKnown RBP30■■■□□ 2.39
SHC1-201ENST00000366442 SPEF2Q9C093 1822 aa30■■■□□ 2.39
SHC1-201ENST00000366442 FAM161AQ3B820 660 aa29.99■■■□□ 2.39
SHC1-201ENST00000366442 H7C1D1 291 aa29.98■■■□□ 2.39
SHC1-201ENST00000366442 ALDH1L1O75891 902 aa29.98■■■□□ 2.39
SHC1-201ENST00000366442 ZC3H15Q8WU90 426 aaKnown RBP29.98■■■□□ 2.39
SHC1-201ENST00000366442 PGAP2Q9UHJ9 254 aa29.98■■■□□ 2.39
SHC1-201ENST00000366442 ZBTB12Q9Y330 459 aaPredicted RBP29.98■■■□□ 2.39
SHC1-201ENST00000366442 G3V3G9 751 aa29.97■■■□□ 2.39
SHC1-201ENST00000366442 DCAF8Q5TAQ9 597 aa29.97■■■□□ 2.39
SHC1-201ENST00000366442 MICALL2Q8IY33 904 aa29.97■■■□□ 2.39
SHC1-201ENST00000366442 KCNQ5Q9NR82 932 aa29.97■■■□□ 2.39
SHC1-201ENST00000366442 SCN9AQ15858 1988 aa29.97■■■□□ 2.39
SHC1-201ENST00000366442 CNTNAP1P78357 1384 aa29.96■■■□□ 2.39
SHC1-201ENST00000366442 GRM8O00222 908 aa29.96■■■□□ 2.39
SHC1-201ENST00000366442 FOXO4P98177 505 aa29.96■■■□□ 2.39
SHC1-201ENST00000366442 MRPL50Q8N5N7 158 aaKnown RBP29.96■■■□□ 2.39
SHC1-201ENST00000366442 MED23Q9ULK4 1368 aa29.95■■■□□ 2.39
SHC1-201ENST00000366442 VIL1P09327 827 aaKnown RBP29.95■■■□□ 2.39
SHC1-201ENST00000366442 MPHOSPH8Q99549 860 aa29.95■■■□□ 2.39
SHC1-201ENST00000366442 SRCIN1Q9C0H9 1055 aa29.95■■■□□ 2.39
SHC1-201ENST00000366442 ANKRD18BA2A2Z9 1011 aa29.94■■■□□ 2.38
SHC1-201ENST00000366442 CCT4P50991 539 aaKnown RBP29.94■■■□□ 2.38
SHC1-201ENST00000366442 HIRAP54198 1017 aaPredicted RBP29.94■■■□□ 2.38
SHC1-201ENST00000366442 SLC4A10Q6U841 1118 aa29.94■■■□□ 2.38
SHC1-201ENST00000366442 TRPM4Q8TD43 1214 aa29.94■■■□□ 2.38
SHC1-201ENST00000366442 ANKRD2Q9GZV1 360 aa29.94■■■□□ 2.38
SHC1-201ENST00000366442 MKRN1Q9UHC7 482 aaKnown RBP29.94■■■□□ 2.38
SHC1-201ENST00000366442 ZNF609O15014 1411 aa29.94■■■□□ 2.38
SHC1-201ENST00000366442 PTPRCP08575 1304 aa29.94■■■□□ 2.38
SHC1-201ENST00000366442 SHTN1A0MZ66 631 aa29.93■■■□□ 2.38
SHC1-201ENST00000366442 PODNQ7Z5L7 613 aa29.93■■■□□ 2.38
SHC1-201ENST00000366442 TRMT2AQ8IZ69 625 aaKnown RBP29.93■■■□□ 2.38
SHC1-201ENST00000366442 C9orf78Q9NZ63 289 aaPredicted RBP29.93■■■□□ 2.38
SHC1-201ENST00000366442 LEMD3Q9Y2U8 911 aa29.93■■■□□ 2.38
SHC1-201ENST00000366442 PSME4Q14997 1843 aa29.92■■■□□ 2.38
SHC1-201ENST00000366442 CDCA7LQ96GN5 454 aa29.92■■■□□ 2.38
SHC1-201ENST00000366442 IFIT5Q13325 482 aaKnown RBP29.91■■■□□ 2.38
SHC1-201ENST00000366442 SSH1Q8WYL5 1049 aa29.91■■■□□ 2.38
SHC1-201ENST00000366442 WTIPA6NIX2 430 aaPredicted RBP29.9■■■□□ 2.38
SHC1-201ENST00000366442 TRPM7Q96QT4 1865 aa29.9■■■□□ 2.38
SHC1-201ENST00000366442 RASSF10A6NK89 507 aa29.89■■■□□ 2.38
SHC1-201ENST00000366442 ALDH1L2Q3SY69 923 aa29.89■■■□□ 2.38
SHC1-201ENST00000366442 AGBL3Q8NEM8 1001 aa29.89■■■□□ 2.38
SHC1-201ENST00000366442 TRAF5O00463 557 aa29.88■■■□□ 2.37
SHC1-201ENST00000366442 EPHA10Q5JZY3 1008 aa29.88■■■□□ 2.37
SHC1-201ENST00000366442 RSBN1LQ6PCB5 846 aaPredicted RBP29.88■■■□□ 2.37
SHC1-201ENST00000366442 LMBR1LQ6UX01 489 aa29.88■■■□□ 2.37
SHC1-201ENST00000366442 SAMD7Q7Z3H4 446 aa29.88■■■□□ 2.37
SHC1-201ENST00000366442 ZNF804BA4D1E1 1349 aa29.88■■■□□ 2.37
SHC1-201ENST00000366442 CT47B1P0C2W7 299 aaPredicted RBP29.87■■■□□ 2.37
SHC1-201ENST00000366442 FMR1Q06787 632 aaKnown RBP eCLIP29.87■■■□□ 2.37
SHC1-201ENST00000366442 CHRNDQ07001 517 aa29.87■■■□□ 2.37
SHC1-201ENST00000366442 CHMP3Q9Y3E7 222 aa29.87■■■□□ 2.37
SHC1-201ENST00000366442 UTYO14607 1347 aa29.87■■■□□ 2.37
SHC1-201ENST00000366442 USP17L3A6NCW0 530 aa29.86■■■□□ 2.37
SHC1-201ENST00000366442 USP17L4A6NCW7 530 aa29.86■■■□□ 2.37
SHC1-201ENST00000366442 CDC37L1Q7L3B6 337 aa29.86■■■□□ 2.37
SHC1-201ENST00000366442 USP17L1Q7RTZ2 530 aa29.86■■■□□ 2.37
SHC1-201ENST00000366442 COA1Q9GZY4 146 aa29.86■■■□□ 2.37
SHC1-201ENST00000366442 CCDC57Q2TAC2 916 aa29.85■■■□□ 2.37
SHC1-201ENST00000366442 DEFB115Q30KQ5 88 aa29.85■■■□□ 2.37
SHC1-201ENST00000366442 TBC1D10BQ4KMP7 808 aaPredicted RBP29.85■■■□□ 2.37
SHC1-201ENST00000366442 CST9Q5W186 159 aa29.85■■■□□ 2.37
SHC1-201ENST00000366442 GLIS2Q9BZE0 524 aaPredicted RBP29.85■■■□□ 2.37
SHC1-201ENST00000366442 ABT1Q9ULW3 272 aaKnown RBP29.85■■■□□ 2.37
SHC1-201ENST00000366442 EGFRP00533 1210 aa29.84■■■□□ 2.37
SHC1-201ENST00000366442 VEGFBP49765 207 aa29.84■■■□□ 2.37
SHC1-201ENST00000366442 ZNF280AP59817 542 aaPredicted RBP29.84■■■□□ 2.37
SHC1-201ENST00000366442 GMLQ99445 158 aa29.84■■■□□ 2.37
SHC1-201ENST00000366442 TXNRD3Q86VQ6 643 aa29.83■■■□□ 2.37
SHC1-201ENST00000366442 NBPF7P0C2Y1 421 aaPredicted RBP29.82■■■□□ 2.36
SHC1-201ENST00000366442 HSPA1AP0DMV8 641 aaKnown RBP29.82■■■□□ 2.36
SHC1-201ENST00000366442 HSPA1BP0DMV9 641 aaKnown RBP29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms