RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ALKBH2Q6NS38 261 aa8.69□□□□□ -1.02
RNU4-28P-201ENST00000364739 ZNF438Q7Z4V0 828 aa8.69□□□□□ -1.02
RNU4-28P-201ENST00000364739 LPIN3Q9BQK8 851 aa8.69□□□□□ -1.02
RNU4-28P-201ENST00000364739 CNTN3Q9P232 1028 aa8.69□□□□□ -1.02
RNU4-28P-201ENST00000364739 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
RNU4-28P-201ENST00000364739 RGS9O75916 674 aaPredicted RBP8.68□□□□□ -1.02
RNU4-28P-201ENST00000364739 EIF2AK2P19525 551 aaKnown RBP8.68□□□□□ -1.02
RNU4-28P-201ENST00000364739 AFF1P51825 1210 aaKnown RBP8.68□□□□□ -1.02
RNU4-28P-201ENST00000364739 NRLP54845 237 aa8.68□□□□□ -1.02
RNU4-28P-201ENST00000364739 ELMSAN1Q6PJG2 1045 aa8.68□□□□□ -1.02
RNU4-28P-201ENST00000364739 GLYCTKQ8IVS8 523 aa8.68□□□□□ -1.02
RNU4-28P-201ENST00000364739 SMG9Q9H0W8 520 aaKnown RBP8.68□□□□□ -1.02
RNU4-28P-201ENST00000364739 FURINP09958 794 aa8.67□□□□□ -1.02
RNU4-28P-201ENST00000364739 NID1P14543 1247 aa8.67□□□□□ -1.02
RNU4-28P-201ENST00000364739 Q8N3U1 123 aa8.67□□□□□ -1.02
RNU4-28P-201ENST00000364739 C1orf127Q8N9H9 656 aa8.67□□□□□ -1.02
RNU4-28P-201ENST00000364739 OR13H1Q8NG92 308 aa8.67□□□□□ -1.02
RNU4-28P-201ENST00000364739 ABI2Q9NYB9 513 aaPredicted RBP8.67□□□□□ -1.02
RNU4-28P-201ENST00000364739 EGFL7Q9UHF1 273 aa8.67□□□□□ -1.02
RNU4-28P-201ENST00000364739 BRD1O95696 1058 aa8.66□□□□□ -1.02
RNU4-28P-201ENST00000364739 PCSK2P16519 638 aa8.66□□□□□ -1.02
RNU4-28P-201ENST00000364739 PCSK7Q16549 785 aa8.66□□□□□ -1.02
RNU4-28P-201ENST00000364739 TTC16Q8NEE8 873 aa8.66□□□□□ -1.02
RNU4-28P-201ENST00000364739 CCER1Q8TC90 406 aaPredicted RBP8.66□□□□□ -1.02
RNU4-28P-201ENST00000364739 KANSL3Q9P2N6 904 aa8.66□□□□□ -1.02
RNU4-28P-201ENST00000364739 ARHGAP4P98171 946 aa8.65□□□□□ -1.02
RNU4-28P-201ENST00000364739 TRAPPC3LQ5T215 181 aa8.65□□□□□ -1.02
RNU4-28P-201ENST00000364739 PDE12Q6L8Q7 609 aaKnown RBP8.65□□□□□ -1.02
RNU4-28P-201ENST00000364739 DMRTC2Q8IXT2 367 aaPredicted RBP8.65□□□□□ -1.02
RNU4-28P-201ENST00000364739 PRDM6Q9NQX0 595 aa8.65□□□□□ -1.02
RNU4-28P-201ENST00000364739 GRIK5Q16478 980 aa8.64□□□□□ -1.03
RNU4-28P-201ENST00000364739 PLD4Q96BZ4 506 aa8.64□□□□□ -1.03
RNU4-28P-201ENST00000364739 NOP53Q9NZM5 478 aaKnown RBP8.64□□□□□ -1.03
RNU4-28P-201ENST00000364739 FOXD3Q9UJU5 478 aaPredicted RBP8.64□□□□□ -1.03
RNU4-28P-201ENST00000364739 GHRHP01286 108 aa8.63□□□□□ -1.03
RNU4-28P-201ENST00000364739 SOX18P35713 384 aa8.63□□□□□ -1.03
RNU4-28P-201ENST00000364739 ATP11AP98196 1134 aa8.63□□□□□ -1.03
RNU4-28P-201ENST00000364739 GDF6Q6KF10 455 aaPredicted RBP8.63□□□□□ -1.03
RNU4-28P-201ENST00000364739 XKR5Q6UX68 686 aa8.63□□□□□ -1.03
RNU4-28P-201ENST00000364739 C1QTNF9BB2RNN3 333 aa8.62□□□□□ -1.03
RNU4-28P-201ENST00000364739 TRPA1O75762 1119 aa8.62□□□□□ -1.03
RNU4-28P-201ENST00000364739 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
RNU4-28P-201ENST00000364739 ACPPP15309 386 aa8.62□□□□□ -1.03
RNU4-28P-201ENST00000364739 HYAL2Q12891 473 aa8.62□□□□□ -1.03
RNU4-28P-201ENST00000364739 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
RNU4-28P-201ENST00000364739 CHRDQ9H2X0 955 aa8.62□□□□□ -1.03
RNU4-28P-201ENST00000364739 FRRS1LQ9P0K9 344 aa8.62□□□□□ -1.03
RNU4-28P-201ENST00000364739 BRPF3Q9ULD4 1205 aa8.62□□□□□ -1.03
RNU4-28P-201ENST00000364739 SOWAHDA6NJG2 315 aa8.61□□□□□ -1.03
RNU4-28P-201ENST00000364739 TNFRSF21O75509 655 aa8.61□□□□□ -1.03
RNU4-28P-201ENST00000364739 CES1P23141 567 aa8.61□□□□□ -1.03
RNU4-28P-201ENST00000364739 GRIK4Q16099 956 aa8.61□□□□□ -1.03
RNU4-28P-201ENST00000364739 ADAMTSL4Q6UY14 1074 aa8.61□□□□□ -1.03
RNU4-28P-201ENST00000364739 CD163Q86VB7 1156 aa8.61□□□□□ -1.03
RNU4-28P-201ENST00000364739 NCAPG2Q86XI2 1143 aa8.61□□□□□ -1.03
RNU4-28P-201ENST00000364739 RASSF4Q9H2L5 321 aa8.61□□□□□ -1.03
RNU4-28P-201ENST00000364739 TRIM33Q9UPN9 1127 aa8.61□□□□□ -1.03
RNU4-28P-201ENST00000364739 EREGO14944 169 aa8.6□□□□□ -1.03
RNU4-28P-201ENST00000364739 HOXD8P13378 290 aaPredicted RBP8.6□□□□□ -1.03
RNU4-28P-201ENST00000364739 TRIM28Q13263 835 aaKnown RBP8.6□□□□□ -1.03
RNU4-28P-201ENST00000364739 MSL1Q68DK7 614 aa8.6□□□□□ -1.03
RNU4-28P-201ENST00000364739 GJD3Q8N144 294 aa8.6□□□□□ -1.03
RNU4-28P-201ENST00000364739 SPACA7Q96KW9 195 aa8.6□□□□□ -1.03
RNU4-28P-201ENST00000364739 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
RNU4-28P-201ENST00000364739 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
RNU4-28P-201ENST00000364739 A0A0A0MRY4 1105 aa8.59□□□□□ -1.03
RNU4-28P-201ENST00000364739 USP5P45974 858 aa8.59□□□□□ -1.03
RNU4-28P-201ENST00000364739 CEP135Q66GS9 1140 aa8.59□□□□□ -1.03
RNU4-28P-201ENST00000364739 CEP120Q8N960 986 aa8.59□□□□□ -1.03
RNU4-28P-201ENST00000364739 TRAIPQ9BWF2 469 aa8.59□□□□□ -1.03
RNU4-28P-201ENST00000364739 LACRTQ9GZZ8 138 aa8.59□□□□□ -1.03
RNU4-28P-201ENST00000364739 RBSNQ9H1K0 784 aa8.59□□□□□ -1.03
RNU4-28P-201ENST00000364739 SALL4Q9UJQ4 1053 aa8.59□□□□□ -1.03
RNU4-28P-201ENST00000364739 GNEQ9Y223 722 aaKnown RBP8.59□□□□□ -1.03
RNU4-28P-201ENST00000364739 PHACTR2O75167 634 aa8.58□□□□□ -1.04
RNU4-28P-201ENST00000364739 KIF4AO95239 1232 aa8.58□□□□□ -1.04
RNU4-28P-201ENST00000364739 POLR3DP05423 398 aaPredicted RBP8.58□□□□□ -1.04
RNU4-28P-201ENST00000364739 CHRNA4P43681 627 aa8.58□□□□□ -1.04
RNU4-28P-201ENST00000364739 ILDR2Q71H61 639 aa8.58□□□□□ -1.04
RNU4-28P-201ENST00000364739 IL22RA1Q8N6P7 574 aa8.58□□□□□ -1.04
RNU4-28P-201ENST00000364739 TTC9Q92623 222 aa8.58□□□□□ -1.04
RNU4-28P-201ENST00000364739 HHIPQ96QV1 700 aa8.58□□□□□ -1.04
RNU4-28P-201ENST00000364739 CDC25BP30305 580 aa8.57□□□□□ -1.04
RNU4-28P-201ENST00000364739 PRRT3Q5FWE3 981 aa8.57□□□□□ -1.04
RNU4-28P-201ENST00000364739 WFDC8Q8IUA0 241 aa8.57□□□□□ -1.04
RNU4-28P-201ENST00000364739 TMC1Q8TDI8 760 aa8.57□□□□□ -1.04
RNU4-28P-201ENST00000364739 SPDYE3A6NKU9 549 aa8.56□□□□□ -1.04
RNU4-28P-201ENST00000364739 NDUFB5O43674 189 aa8.56□□□□□ -1.04
RNU4-28P-201ENST00000364739 SPATA31C1P0DKV0 1188 aa8.56□□□□□ -1.04
RNU4-28P-201ENST00000364739 EHHADHQ08426 723 aa8.56□□□□□ -1.04
RNU4-28P-201ENST00000364739 SHISA2Q6UWI4 295 aa8.56□□□□□ -1.04
RNU4-28P-201ENST00000364739 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
RNU4-28P-201ENST00000364739 POP1Q99575 1024 aaKnown RBP8.56□□□□□ -1.04
RNU4-28P-201ENST00000364739 LATS2Q9NRM7 1088 aa8.56□□□□□ -1.04
RNU4-28P-201ENST00000364739 USPL1Q5W0Q7 1092 aa8.55□□□□□ -1.04
RNU4-28P-201ENST00000364739 TXNDC11Q6PKC3 985 aa8.55□□□□□ -1.04
RNU4-28P-201ENST00000364739 SNX29Q8TEQ0 813 aa8.55□□□□□ -1.04
RNU4-28P-201ENST00000364739 PBX4Q9BYU1 374 aa8.55□□□□□ -1.04
RNU4-28P-201ENST00000364739 ZFYVE28Q9HCC9 887 aa8.55□□□□□ -1.04
RNU4-28P-201ENST00000364739 SH2B1Q9NRF2 756 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms