RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 RFX5P48382 616 aaPredicted RBP8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 HDAC1Q13547 482 aaPredicted RBP8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 CCDC93Q567U6 631 aa8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 DPP8Q6V1X1 898 aaPredicted RBP8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 ARHGAP27Q6ZUM4 889 aa8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 MPNDQ8N594 471 aa8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 KLHDC4Q8TBB5 520 aa8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 GCC1Q96CN9 775 aa8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 EYA3Q99504 573 aa8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 PPP4R2Q9NY27 417 aa8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 MINPP1Q9UNW1 487 aa8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 PA2G4Q9UQ80 394 aaKnown RBP8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 AFDNP55196 1824 aaKnown RBP8.17□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 APBB1O00213 710 aa8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 CHRNDQ07001 517 aa8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 KIF1BPQ96EK5 621 aa8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 BCL11AQ9H165 835 aa8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 DCTPP1Q9H773 170 aa8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 GGA1Q9UJY5 639 aa8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 LEMD3Q9Y2U8 911 aa8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 NOP58Q9Y2X3 529 aaKnown RBP8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 RIPOR2Q9Y4F9 1068 aa8.16□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 COL24A1Q17RW2 1714 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 XDHP47989 1333 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 PDE8BO95263 885 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 IFIT1P09914 478 aaKnown RBP8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 SLC5A1P13866 664 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 LRRC24Q50LG9 513 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 GORABQ5T7V8 394 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 ANKRD45Q5TZF3 282 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 VPS37DQ86XT2 251 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 SIRT2Q8IXJ6 389 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 CLASRPQ8N2M8 674 aaKnown RBP8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 NEUROD6Q96NK8 337 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 PUS3Q9BZE2 481 aaKnown RBP8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 LRRCC1Q9C099 1032 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 EXOC6BQ9Y2D4 811 aa8.15□□□□□ -1.1
VTRNA3-1P-201ENST00000362552 NRXN2Q9P2S2 1712 aa8.15□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 ZNF804BA4D1E1 1349 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 TAF5LO75529 589 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 IFIT2P09913 472 aaKnown RBP8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 GPSM2P81274 684 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 UBE4AQ14139 1066 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 PUM3Q15397 648 aaKnown RBP8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 CAVIN4Q5BKX8 364 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 B4GALNT3Q6L9W6 998 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 RHPN1Q8TCX5 695 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 LPIN2Q92539 896 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 VPS33BQ9H267 617 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 PODXL2Q9NZ53 605 aa8.14□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 RIMBP2O15034 1052 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 FRAT2O75474 233 aaPredicted RBP8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 UFL1O94874 794 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 IGHDP01880 384 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 FKBP4Q02790 459 aaKnown RBP eCLIP8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 TFCP2Q12800 502 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 ATP2B3Q16720 1220 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 WASHC4Q2M389 1173 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 CENPQQ7L2Z9 268 aaPredicted RBP8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 ATG9AQ7Z3C6 839 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 TBC1D16Q8TBP0 767 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 C7orf43Q8WVR3 580 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 TAOK3Q9H2K8 898 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 GPR108Q9NPR9 543 aa8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 GNL3LQ9NVN8 582 aaKnown RBP8.13□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 PPIP5K2O43314 1243 aa8.12□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 SASH1O94885 1247 aa8.12□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 TIMM10P62072 90 aa8.12□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 CCDC158Q5M9N0 1113 aa8.12□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 LARGE2Q8N3Y3 721 aa8.12□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 JDP2Q8WYK2 163 aa8.12□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 GPATCH3Q96I76 525 aa8.12□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 PSMD1Q99460 953 aa8.12□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 IL1RAPL2Q9NP60 686 aa8.12□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 A0A1B0GUL7 405 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 HIBADHP31937 336 aaKnown RBP8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 IARSP41252 1262 aaKnown RBP8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 TNNI3KQ59H18 835 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 OLFM4Q6UX06 510 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 ZNF804AQ7Z570 1209 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 AACSQ86V21 672 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 SMC5Q8IY18 1101 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 NIM1KQ8IY84 436 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 RTFDC1Q9BY42 306 aaPredicted RBP8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 CCDC8Q9H0W5 538 aaPredicted RBP8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 ZNF277Q9NRM2 450 aaPredicted RBP8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 POLLQ9UGP5 575 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 FPGT-TNNI3KV9GXZ4 949 aa8.11□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 N4BP2Q86UW6 1770 aaPredicted RBP8.1□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 DDX60Q8IY21 1712 aaKnown RBP8.1□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 SMARCA5O60264 1052 aaPredicted RBP8.1□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 UQCRFS1P1P0C7P4 283 aa8.1□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 LMNB1P20700 586 aa8.1□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 EIF6P56537 245 aaKnown RBP8.1□□□□□ -1.11
VTRNA3-1P-201ENST00000362552 TTC39AQ5SRH9 613 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms