RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 MYD88Q99836 296 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 NUP62CLQ9H1M0 184 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 DOT1LQ8TEK3 1739 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 JCADQ9P266 1359 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
SMC3-201ENST00000361804 ARID5BQ14865 1188 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 CCDC186Q7Z3E2 898 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 PGBD1Q96JS3 809 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 DNAJC25Q9H1X3 360 aa12.57□□□□□ -0.4
SMC3-201ENST00000361804 KRT85P78386 507 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 DDX46Q7L014 1031 aaKnown RBP12.56□□□□□ -0.4
SMC3-201ENST00000361804 CHST3Q7LGC8 479 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 KIAA1524Q8TCG1 905 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 GPATCH3Q96I76 525 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 SPATA32Q96LK8 384 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 CBX8Q9HC52 389 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 DISP2A7MBM2 1401 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 IGSF3O75054 1194 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 CCDC192P0DO97 292 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 DRC7Q8IY82 874 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
SMC3-201ENST00000361804 MYH3P11055 1940 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 GUCY1B3Q02153 619 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 MAP3K11Q16584 847 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 C16orf45Q96MC5 204 aaPredicted RBP12.56□□□□□ -0.4
SMC3-201ENST00000361804 TNMDQ9H2S6 317 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 ZHX1Q9UKY1 873 aaPredicted RBP12.56□□□□□ -0.4
SMC3-201ENST00000361804 NAP1L2Q9ULW6 460 aaPredicted RBP12.56□□□□□ -0.4
SMC3-201ENST00000361804 LRP6O75581 1613 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
SMC3-201ENST00000361804 RPS6KB1P23443 525 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 AMOTQ4VCS5 1084 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 BICD2Q8TD16 824 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 XAGE3Q8WTP9 111 aa12.56□□□□□ -0.4
SMC3-201ENST00000361804 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
SMC3-201ENST00000361804 HSP90B1P14625 803 aaKnown RBP12.55□□□□□ -0.4
SMC3-201ENST00000361804 TFCP2Q12800 502 aa12.55□□□□□ -0.4
SMC3-201ENST00000361804 PLEKHO1Q53GL0 409 aaPredicted RBP12.55□□□□□ -0.4
SMC3-201ENST00000361804 COPS6Q7L5N1 327 aa12.55□□□□□ -0.4
SMC3-201ENST00000361804 DBNLQ9UJU6 430 aaKnown RBP12.55□□□□□ -0.4
SMC3-201ENST00000361804 SPEF2Q9C093 1822 aa12.55□□□□□ -0.4
SMC3-201ENST00000361804 GOLGA6L4A6NEF3 574 aa12.55□□□□□ -0.4
SMC3-201ENST00000361804 LEO1Q8WVC0 666 aaPredicted RBP12.55□□□□□ -0.4
SMC3-201ENST00000361804 BRF1Q92994 677 aa12.55□□□□□ -0.4
SMC3-201ENST00000361804 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
SMC3-201ENST00000361804 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 TAF5LO75529 589 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
SMC3-201ENST00000361804 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 LINS1Q8NG48 757 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 KCNB2Q92953 911 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 DBNDD2Q9BQY9 259 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 NCOA5Q9HCD5 579 aaKnown RBP12.54□□□□□ -0.4
SMC3-201ENST00000361804 SPTLC3Q9NUV7 552 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 CCT2P78371 535 aaKnown RBP12.54□□□□□ -0.4
SMC3-201ENST00000361804 Q6ZUG5 572 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 FAM200AQ8TCP9 573 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 TRIM5Q9C035 493 aa12.54□□□□□ -0.4
SMC3-201ENST00000361804 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
SMC3-201ENST00000361804 CCDC144BQ3MJ40 725 aa12.53□□□□□ -0.4
SMC3-201ENST00000361804 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
SMC3-201ENST00000361804 COL5A3P25940 1745 aaPredicted RBP12.53□□□□□ -0.4
SMC3-201ENST00000361804 ALDH1L1O75891 902 aa12.53□□□□□ -0.4
SMC3-201ENST00000361804 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
SMC3-201ENST00000361804 PRDM4Q9UKN5 801 aa12.53□□□□□ -0.4
SMC3-201ENST00000361804 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
SMC3-201ENST00000361804 STOX1Q6ZVD7 989 aa12.53□□□□□ -0.4
SMC3-201ENST00000361804 MYH7P12883 1935 aa12.53□□□□□ -0.4
SMC3-201ENST00000361804 NEURL1BA8MQ27 555 aa12.52□□□□□ -0.4
SMC3-201ENST00000361804 DDX21Q9NR30 783 aaKnown RBP eCLIP12.52□□□□□ -0.4
SMC3-201ENST00000361804 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.4
SMC3-201ENST00000361804 ARAP2Q8WZ64 1704 aa12.52□□□□□ -0.4
SMC3-201ENST00000361804 CYP21A2P08686 494 aa12.52□□□□□ -0.4
SMC3-201ENST00000361804 ERC1Q8IUD2 1116 aa12.52□□□□□ -0.4
SMC3-201ENST00000361804 LTBP4Q8N2S1 1624 aa12.52□□□□□ -0.41
SMC3-201ENST00000361804 LRP5O75197 1615 aa12.52□□□□□ -0.41
SMC3-201ENST00000361804 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMC3-201ENST00000361804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.419e-8■■■■■ 38.3
SMC3-201ENST00000361804 C11orf57Q6ZUT1 292 aaPredicted RBP12.52□□□□□ -0.41
SMC3-201ENST00000361804 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.41
SMC3-201ENST00000361804 MED23Q9ULK4 1368 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 PSMA5P28066 241 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 FGD1P98174 961 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 APOBRQ0VD83 1088 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 SCRN1Q12765 414 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 GCKRQ14397 625 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 SYTL4Q96C24 671 aaPredicted RBP12.51□□□□□ -0.41
SMC3-201ENST00000361804 ZNF609O15014 1411 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 OTUD7BQ6GQQ9 843 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 ZNF592Q92610 1267 aa12.51□□□□□ -0.41
SMC3-201ENST00000361804 CCDC94Q9BW85 323 aaPredicted RBP12.51□□□□□ -0.41
SMC3-201ENST00000361804 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
SMC3-201ENST00000361804 TAF1P21675 1872 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 USP27XA6NNY8 438 aa12.5□□□□□ -0.41
SMC3-201ENST00000361804 H3BQV1 296 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms