RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 GOLGA5Q8TBA6 731 aa10.55□□□□□ -0.72
CALD1-201ENST00000361675 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.55□□□□□ -0.72
CALD1-201ENST00000361675 CCDC175P0C221 793 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 IL13P35225 146 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 CCDC102AQ96A19 550 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 CLIP2Q9UDT6 1046 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 FAM83GA6ND36 823 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 SMC1AQ14683 1233 aaKnown RBP10.54□□□□□ -0.72
CALD1-201ENST00000361675 PUS10Q3MIT2 529 aaKnown RBP10.54□□□□□ -0.72
CALD1-201ENST00000361675 LUZP1Q86V48 1076 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 CKAP2LQ8IYA6 745 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 FBXO18Q8NFZ0 1043 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 URI1O94763 535 aaPredicted RBP10.54□□□□□ -0.72
CALD1-201ENST00000361675 IVLP07476 585 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 NF2P35240 595 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 PSMD2Q13200 908 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 ARMC3Q5W041 872 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 MMS22LQ6ZRQ5 1243 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 SDR16C5Q8N3Y7 309 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 ZSWIM4Q9H7M6 989 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
CALD1-201ENST00000361675 ATP7BP35670 1465 aa10.53□□□□□ -0.72
CALD1-201ENST00000361675 GOLGA6L19H0YKK7 550 aa10.53□□□□□ -0.72
CALD1-201ENST00000361675 PPP1R12AO14974 1030 aaPredicted RBP10.53□□□□□ -0.72
CALD1-201ENST00000361675 ZRANB2O95218 330 aaKnown RBP eCLIP10.53□□□□□ -0.72
CALD1-201ENST00000361675 AP1ARQ63HQ0 302 aa10.53□□□□□ -0.72
CALD1-201ENST00000361675 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.53□□□□□ -0.72
CALD1-201ENST00000361675 DCTN1Q14203 1278 aa10.53□□□□□ -0.72
CALD1-201ENST00000361675 HSP90B2PQ58FF3 399 aa10.53□□□□□ -0.72
CALD1-201ENST00000361675 TAX1BP1Q86VP1 789 aa10.53□□□□□ -0.72
CALD1-201ENST00000361675 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
CALD1-201ENST00000361675 BSDC1Q9NW68 430 aaPredicted RBP10.53□□□□□ -0.72
CALD1-201ENST00000361675 SETDB1Q15047 1291 aa10.53□□□□□ -0.72
CALD1-201ENST00000361675 CCDC189A1A4V9 331 aa10.52□□□□□ -0.72
CALD1-201ENST00000361675 CCDC192P0DO97 292 aa10.52□□□□□ -0.72
CALD1-201ENST00000361675 TRIM27P14373 513 aa10.52□□□□□ -0.72
CALD1-201ENST00000361675 MED4Q9NPJ6 270 aa10.52□□□□□ -0.72
CALD1-201ENST00000361675 ELL2O00472 640 aaPredicted RBP10.52□□□□□ -0.73
CALD1-201ENST00000361675 RBM33Q96EV2 1170 aaKnown RBP10.52□□□□□ -0.73
CALD1-201ENST00000361675 MAF1Q9H063 256 aa10.52□□□□□ -0.73
CALD1-201ENST00000361675 NOB1Q9ULX3 412 aaKnown RBP10.52□□□□□ -0.73
CALD1-201ENST00000361675 SKILP12757 684 aa10.52□□□□□ -0.73
CALD1-201ENST00000361675 ACTN2P35609 894 aa10.52□□□□□ -0.73
CALD1-201ENST00000361675 MUM1L1Q5H9M0 696 aa10.52□□□□□ -0.73
CALD1-201ENST00000361675 CEP57Q86XR8 500 aa10.52□□□□□ -0.73
CALD1-201ENST00000361675 FMNL2Q96PY5 1086 aa10.52□□□□□ -0.73
CALD1-201ENST00000361675 EPC1Q9H2F5 836 aa10.52□□□□□ -0.73
CALD1-201ENST00000361675 TECPR2O15040 1411 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 FAM135BQ49AJ0 1406 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 EDC4Q6P2E9 1401 aaKnown RBP10.51□□□□□ -0.73
CALD1-201ENST00000361675 KIF2AO00139 706 aaPredicted RBP10.51□□□□□ -0.73
CALD1-201ENST00000361675 CDC45O75419 566 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 FAM160A1Q05DH4 1040 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 FAM210AQ96ND0 272 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 ACEP12821 1306 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 UNCXA6NJT0 531 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 PLA2G4AP47712 749 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 MVPQ14764 893 aaKnown RBP10.51□□□□□ -0.73
CALD1-201ENST00000361675 FOXR1Q6PIV2 292 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 N4BP2L2Q92802 583 aaPredicted RBP10.51□□□□□ -0.73
CALD1-201ENST00000361675 BORCS6Q96GS4 357 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 CNPY2Q9Y2B0 182 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 BECN2A8MW95 431 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 FCHSD2O94868 740 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 GCKP35557 465 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 SYCP1Q15431 976 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 RNF20Q5VTR2 975 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 CHD1LQ86WJ1 897 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 PHC3Q8NDX5 983 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 PICK1Q9NRD5 415 aa10.51□□□□□ -0.73
CALD1-201ENST00000361675 USP27XA6NNY8 438 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 ERLIN2O94905 339 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 NAA25Q14CX7 972 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 ZC3H12AQ5D1E8 599 aaKnown RBP10.5□□□□□ -0.73
CALD1-201ENST00000361675 ADAM21Q9UKJ8 722 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 CDC42BPGQ6DT37 1551 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 CTAGE5O15320 804 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 PMM1Q92871 262 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 KIF1BPQ96EK5 621 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 CHCHD3Q9NX63 227 aaKnown RBP10.5□□□□□ -0.73
CALD1-201ENST00000361675 AMOTL2Q9Y2J4 779 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 CCDC196A0A1B0GTZ2 297 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 SNW1Q13573 536 aaKnown RBP10.5□□□□□ -0.73
CALD1-201ENST00000361675 ZSCAN25Q6NSZ9 544 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 NFATC2IPQ8NCF5 419 aa10.5□□□□□ -0.73
CALD1-201ENST00000361675 LARP6Q9BRS8 491 aaKnown RBP10.5□□□□□ -0.73
CALD1-201ENST00000361675 USP5P45974 858 aa10.49□□□□□ -0.73
CALD1-201ENST00000361675 COG3Q96JB2 828 aa10.49□□□□□ -0.73
CALD1-201ENST00000361675 IPO5O00410 1097 aaKnown RBP10.49□□□□□ -0.73
CALD1-201ENST00000361675 ERCC3P19447 782 aa10.49□□□□□ -0.73
CALD1-201ENST00000361675 ARID5BQ14865 1188 aa10.49□□□□□ -0.73
CALD1-201ENST00000361675 FBXW10Q5XX13 1052 aa10.49□□□□□ -0.73
CALD1-201ENST00000361675 KIRREL3Q8IZU9 778 aa10.49□□□□□ -0.73
CALD1-201ENST00000361675 TMEM57Q8N5G2 664 aa10.49□□□□□ -0.73
CALD1-201ENST00000361675 VPS37CA5D8V6 355 aaPredicted RBP10.48□□□□□ -0.73
CALD1-201ENST00000361675 KRT24Q2M2I5 525 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 TRIM11Q96F44 468 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 UPF3BQ9BZI7 483 aaKnown RBP10.48□□□□□ -0.73
CALD1-201ENST00000361675 ARFGAP3Q9NP61 516 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms