RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 SLIT3O75094 1523 aa10.73□□□□□ -0.69
TOP1-201ENST00000361337 ARHGEF10O15013 1369 aa10.73□□□□□ -0.69
TOP1-201ENST00000361337 IBSPP21815 317 aaPredicted RBP10.73□□□□□ -0.69
TOP1-201ENST00000361337 BOLA2Q9H3K6 86 aa10.73□□□□□ -0.69
TOP1-201ENST00000361337 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.73□□□□□ -0.69
TOP1-201ENST00000361337 MRVI1Q9Y6F6 885 aa10.73□□□□□ -0.69
TOP1-201ENST00000361337 KCNQ2O43526 872 aa10.73□□□□□ -0.69
TOP1-201ENST00000361337 GNL2Q13823 731 aaKnown RBP10.73□□□□□ -0.69
TOP1-201ENST00000361337 HELBQ8NG08 1087 aaPredicted RBP10.73□□□□□ -0.69
TOP1-201ENST00000361337 C16orf45Q96MC5 204 aaPredicted RBP10.73□□□□□ -0.69
TOP1-201ENST00000361337 SNRKQ9NRH2 765 aa10.73□□□□□ -0.69
TOP1-201ENST00000361337 PDRG1Q9NUG6 133 aa10.73□□□□□ -0.69
TOP1-201ENST00000361337 TPCN1Q9ULQ1 816 aa10.73□□□□□ -0.69
TOP1-201ENST00000361337 COL22A1Q8NFW1 1626 aaPredicted RBP10.73□□□□□ -0.69
TOP1-201ENST00000361337 TFIP11Q9UBB9 837 aaKnown RBP10.73□□□□□ -0.69
TOP1-201ENST00000361337 IQSEC3Q9UPP2 1182 aaPredicted RBP10.73□□□□□ -0.69
TOP1-201ENST00000361337 NFAT5O94916 1531 aa10.73□□□□□ -0.69
TOP1-201ENST00000361337 GIGYF1O75420 1035 aaPredicted RBP10.72□□□□□ -0.69
TOP1-201ENST00000361337 LETM1O95202 739 aaPredicted RBP10.72□□□□□ -0.69
TOP1-201ENST00000361337 HSPA1LP34931 641 aa10.72□□□□□ -0.69
TOP1-201ENST00000361337 FKBP4Q02790 459 aaKnown RBP eCLIP10.72□□□□□ -0.69
TOP1-201ENST00000361337 POLA2Q14181 598 aa10.72□□□□□ -0.69
TOP1-201ENST00000361337 ZRSR1Q15695 479 aaKnown RBP10.72□□□□□ -0.69
TOP1-201ENST00000361337 CCDC186Q7Z3E2 898 aa10.72□□□□□ -0.69
TOP1-201ENST00000361337 CCDC57Q2TAC2 916 aa10.72□□□□□ -0.69
TOP1-201ENST00000361337 ANKRD7Q92527 254 aa10.72□□□□□ -0.69
TOP1-201ENST00000361337 DIAPH3Q9NSV4 1193 aa10.72□□□□□ -0.69
TOP1-201ENST00000361337 NDUFB9Q9Y6M9 179 aa10.72□□□□□ -0.69
TOP1-201ENST00000361337 UTP14CQ5TAP6 766 aaKnown RBP10.72□□□□□ -0.69
TOP1-201ENST00000361337 VPS37DQ86XT2 251 aa10.72□□□□□ -0.69
TOP1-201ENST00000361337 CNTROBQ8N137 903 aa10.72□□□□□ -0.69
TOP1-201ENST00000361337 AOX1Q06278 1338 aa10.71□□□□□ -0.69
TOP1-201ENST00000361337 IRX3P78415 501 aaPredicted RBP10.71□□□□□ -0.69
TOP1-201ENST00000361337 TYRO3Q06418 890 aa10.71□□□□□ -0.69
TOP1-201ENST00000361337 LMBR1LQ6UX01 489 aa10.71□□□□□ -0.69
TOP1-201ENST00000361337 GPATCH3Q96I76 525 aa10.71□□□□□ -0.69
TOP1-201ENST00000361337 G3V3G9 751 aa10.71□□□□□ -0.69
TOP1-201ENST00000361337 NCBP1Q09161 790 aaKnown RBP10.71□□□□□ -0.69
TOP1-201ENST00000361337 DCAF8Q5TAQ9 597 aa10.71□□□□□ -0.69
TOP1-201ENST00000361337 FAM227BQ96M60 508 aa10.71□□□□□ -0.69
TOP1-201ENST00000361337 DACT1Q9NYF0 836 aa10.71□□□□□ -0.69
TOP1-201ENST00000361337 HDAC5Q9UQL6 1122 aa10.71□□□□□ -0.69
TOP1-201ENST00000361337 WDR17Q8IZU2 1322 aa10.71□□□□□ -0.7
TOP1-201ENST00000361337 PCDH11XQ9BZA7 1347 aa10.71□□□□□ -0.7
TOP1-201ENST00000361337 PCDH11YQ9BZA8 1340 aa10.71□□□□□ -0.7
TOP1-201ENST00000361337 PATL2C9JE40 543 aaKnown RBP10.71□□□□□ -0.7
TOP1-201ENST00000361337 CCDC192P0DO97 292 aa10.71□□□□□ -0.7
TOP1-201ENST00000361337 ANO6Q4KMQ2 910 aa10.71□□□□□ -0.7
TOP1-201ENST00000361337 IPO4Q8TEX9 1081 aaKnown RBP10.71□□□□□ -0.7
TOP1-201ENST00000361337 QTRT2Q9H974 415 aaKnown RBP10.71□□□□□ -0.7
TOP1-201ENST00000361337 CBX8Q9HC52 389 aa10.71□□□□□ -0.7
TOP1-201ENST00000361337 A0A087WWV3 80 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 CTIFO43310 598 aaKnown RBP10.7□□□□□ -0.7
TOP1-201ENST00000361337 WASHC4Q2M389 1173 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 RREB1Q92766 1687 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 RGPD2P0DJD1 1756 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 CASZ1Q86V15 1759 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 POLR3GO15318 223 aaPredicted RBP10.7□□□□□ -0.7
TOP1-201ENST00000361337 ARID5BQ14865 1188 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 LARP1BQ659C4 914 aaKnown RBP10.7□□□□□ -0.7
TOP1-201ENST00000361337 KSR2Q6VAB6 950 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 FAM200AQ8TCP9 573 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 KIF1BPQ96EK5 621 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 ZNF594Q96JF6 807 aaPredicted RBP10.7□□□□□ -0.7
TOP1-201ENST00000361337 DDX60Q8IY21 1712 aaKnown RBP10.7□□□□□ -0.7
TOP1-201ENST00000361337 STK3Q13188 491 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 FSD1Q9BTV5 496 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 ZSWIM6Q9HCJ5 1215 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 ATP6V1DQ9Y5K8 247 aa10.7□□□□□ -0.7
TOP1-201ENST00000361337 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.69□□□□□ -0.7
TOP1-201ENST00000361337 CCDC144BQ3MJ40 725 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 CCDC144CPQ8IYA2 1237 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 PIGBQ92521 554 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 MPHOSPH8Q99549 860 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 NUP62CLQ9H1M0 184 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 KDRP35968 1356 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 GOLGA6L6A8MZA4 724 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 RAB11FIP3O75154 756 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 MAP3K11Q16584 847 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 TPD52L1Q16890 204 aaPredicted RBP10.69□□□□□ -0.7
TOP1-201ENST00000361337 VPS53Q5VIR6 699 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 JAG2Q9Y219 1238 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 CYP46A1Q9Y6A2 500 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 ZPR1O75312 459 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 NECTIN1Q15223 517 aa10.69□□□□□ -0.7
TOP1-201ENST00000361337 DZIP3Q86Y13 1208 aaKnown RBP10.69□□□□□ -0.7
TOP1-201ENST00000361337 DDX21Q9NR30 783 aaKnown RBP eCLIP10.69□□□□□ -0.7
TOP1-201ENST00000361337 HTATSF1O43719 755 aaKnown RBP10.68□□□□□ -0.7
TOP1-201ENST00000361337 NR1I2O75469 434 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 CARD10Q9BWT7 1032 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 NIP7Q9Y221 180 aaKnown RBP eCLIP10.68□□□□□ -0.7
TOP1-201ENST00000361337 RBM8AQ9Y5S9 174 aaKnown RBP10.68□□□□□ -0.7
TOP1-201ENST00000361337 LAMB4A4D0S4 1761 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 USP27XA6NNY8 438 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 GRM8O00222 908 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 GNPATO15228 680 aa10.68□□□□□ -0.7
TOP1-201ENST00000361337 FOSBP53539 338 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms