RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 ZFP91Q96JP5 570 aaPredicted RBP9.49□□□□□ -0.89
CCL28-201ENST00000361115 FAM13BQ9NYF5 915 aa9.49□□□□□ -0.89
CCL28-201ENST00000361115 PITPNM2Q9BZ72 1349 aa9.49□□□□□ -0.89
CCL28-201ENST00000361115 ZSCAN30Q86W11 494 aa9.49□□□□□ -0.89
CCL28-201ENST00000361115 SYNE4Q8N205 404 aa9.49□□□□□ -0.89
CCL28-201ENST00000361115 HSCBQ8IWL3 235 aa9.49□□□□□ -0.89
CCL28-201ENST00000361115 NIM1KQ8IY84 436 aa9.49□□□□□ -0.89
CCL28-201ENST00000361115 PPP1R9BQ96SB3 815 aa9.49□□□□□ -0.89
CCL28-201ENST00000361115 AKAP11Q9UKA4 1901 aa9.48□□□□□ -0.89
CCL28-201ENST00000361115 BBOX1O75936 387 aa9.48□□□□□ -0.89
CCL28-201ENST00000361115 LBX1P52954 281 aa9.48□□□□□ -0.89
CCL28-201ENST00000361115 PPP1R42Q7Z4L9 355 aa9.48□□□□□ -0.89
CCL28-201ENST00000361115 AK9Q5TCS8 1911 aa9.48□□□□□ -0.89
CCL28-201ENST00000361115 CCDC173Q0VFZ6 552 aa9.48□□□□□ -0.89
CCL28-201ENST00000361115 MKRN1Q9UHC7 482 aaKnown RBP9.48□□□□□ -0.89
CCL28-201ENST00000361115 R3HCC1Q9Y3T6 440 aaKnown RBP9.48□□□□□ -0.89
CCL28-201ENST00000361115 DDNO94850 711 aaPredicted RBP9.47□□□□□ -0.89
CCL28-201ENST00000361115 FBLN1P23142 703 aa9.47□□□□□ -0.89
CCL28-201ENST00000361115 MTHFSDQ2M296 383 aaKnown RBP9.47□□□□□ -0.89
CCL28-201ENST00000361115 CDC37L1Q7L3B6 337 aa9.47□□□□□ -0.89
CCL28-201ENST00000361115 NASPP49321 788 aaPredicted RBP9.47□□□□□ -0.89
CCL28-201ENST00000361115 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
CCL28-201ENST00000361115 BCL2L13Q9BXK5 485 aa9.47□□□□□ -0.89
CCL28-201ENST00000361115 ZNF541Q9H0D2 1346 aa9.46□□□□□ -0.89
CCL28-201ENST00000361115 NPHP1O15259 732 aa9.46□□□□□ -0.89
CCL28-201ENST00000361115 IGSF3O75054 1194 aa9.46□□□□□ -0.89
CCL28-201ENST00000361115 RARSP54136 660 aaKnown RBP9.46□□□□□ -0.89
CCL28-201ENST00000361115 KIF6Q6ZMV9 814 aa9.46□□□□□ -0.89
CCL28-201ENST00000361115 SP8Q8IXZ3 490 aa9.46□□□□□ -0.89
CCL28-201ENST00000361115 MAP3K15Q6ZN16 1313 aa9.46□□□□□ -0.9
CCL28-201ENST00000361115 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
CCL28-201ENST00000361115 GPRC5DQ9NZD1 345 aa9.46□□□□□ -0.9
CCL28-201ENST00000361115 ZNRF3Q9ULT6 936 aa9.46□□□□□ -0.9
CCL28-201ENST00000361115 RAB3GAP1Q15042 981 aa9.45□□□□□ -0.9
CCL28-201ENST00000361115 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
CCL28-201ENST00000361115 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
CCL28-201ENST00000361115 RPGRQ92834 1020 aaKnown RBP9.45□□□□□ -0.9
CCL28-201ENST00000361115 GPR101Q96P66 508 aaPredicted RBP9.45□□□□□ -0.9
CCL28-201ENST00000361115 RWDD1Q9H446 243 aaPredicted RBP9.45□□□□□ -0.9
CCL28-201ENST00000361115 ABT1Q9ULW3 272 aaKnown RBP9.45□□□□□ -0.9
CCL28-201ENST00000361115 ATP6V0A2Q9Y487 856 aa9.45□□□□□ -0.9
CCL28-201ENST00000361115 MSNP26038 577 aaKnown RBP9.45□□□□□ -0.9
CCL28-201ENST00000361115 TERF1P54274 439 aa9.45□□□□□ -0.9
CCL28-201ENST00000361115 HOXB7P09629 217 aa9.45□□□□□ -0.9
CCL28-201ENST00000361115 CTU1Q7Z7A3 348 aaKnown RBP9.45□□□□□ -0.9
CCL28-201ENST00000361115 SMC5Q8IY18 1101 aa9.45□□□□□ -0.9
CCL28-201ENST00000361115 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
CCL28-201ENST00000361115 GBP4Q96PP9 640 aa9.45□□□□□ -0.9
CCL28-201ENST00000361115 EYA3Q99504 573 aa9.45□□□□□ -0.9
CCL28-201ENST00000361115 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
CCL28-201ENST00000361115 BTBD11A6QL63 1104 aa9.44□□□□□ -0.9
CCL28-201ENST00000361115 PPEF1O14829 653 aaPredicted RBP9.44□□□□□ -0.9
CCL28-201ENST00000361115 CAPN15O75808 1086 aa9.44□□□□□ -0.9
CCL28-201ENST00000361115 SKOR2Q2VWA4 1001 aaPredicted RBP9.44□□□□□ -0.9
CCL28-201ENST00000361115 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
CCL28-201ENST00000361115 UQCRHLA0A096LP55 91 aa9.44□□□□□ -0.9
CCL28-201ENST00000361115 UQCRHP07919 91 aa9.44□□□□□ -0.9
CCL28-201ENST00000361115 AEBP1Q8IUX7 1158 aa9.44□□□□□ -0.9
CCL28-201ENST00000361115 MAP7D2Q96T17 732 aa9.44□□□□□ -0.9
CCL28-201ENST00000361115 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.44□□□□□ -0.9
CCL28-201ENST00000361115 ZHX1Q9UKY1 873 aaPredicted RBP9.44□□□□□ -0.9
CCL28-201ENST00000361115 KIAA2012Q0VF49 1180 aa9.43□□□□□ -0.9
CCL28-201ENST00000361115 SAPCD2Q86UD0 394 aa9.43□□□□□ -0.9
CCL28-201ENST00000361115 MCOLN1Q9GZU1 580 aa9.43□□□□□ -0.9
CCL28-201ENST00000361115 ALDH1A1P00352 501 aa9.43□□□□□ -0.9
CCL28-201ENST00000361115 LMOD3Q0VAK6 560 aa9.43□□□□□ -0.9
CCL28-201ENST00000361115 MKRN4PQ13434 485 aaPredicted RBP9.43□□□□□ -0.9
CCL28-201ENST00000361115 NEUROD2Q15784 382 aa9.43□□□□□ -0.9
CCL28-201ENST00000361115 SMAP1Q8IYB5 467 aaPredicted RBP9.43□□□□□ -0.9
CCL28-201ENST00000361115 LGR6Q9HBX8 967 aa9.43□□□□□ -0.9
CCL28-201ENST00000361115 RRP7AQ9Y3A4 280 aaKnown RBP9.43□□□□□ -0.9
CCL28-201ENST00000361115 CD2BP2O95400 341 aaKnown RBP9.42□□□□□ -0.9
CCL28-201ENST00000361115 SCNN1DP51172 638 aa9.42□□□□□ -0.9
CCL28-201ENST00000361115 CIAPIN1Q6FI81 312 aa9.42□□□□□ -0.9
CCL28-201ENST00000361115 ZNF34Q8IZ26 560 aa9.42□□□□□ -0.9
CCL28-201ENST00000361115 SNX21Q969T3 373 aa9.42□□□□□ -0.9
CCL28-201ENST00000361115 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
CCL28-201ENST00000361115 ZNF646O15015 1829 aaPredicted RBP9.42□□□□□ -0.9
CCL28-201ENST00000361115 ECM29Q5VYK3 1845 aa9.42□□□□□ -0.9
CCL28-201ENST00000361115 H7C1D1 291 aa9.42□□□□□ -0.9
CCL28-201ENST00000361115 TAF7Q15545 349 aaPredicted RBP9.42□□□□□ -0.9
CCL28-201ENST00000361115 C2orf69Q8N8R5 385 aa9.42□□□□□ -0.9
CCL28-201ENST00000361115 SECISBP2LQ93073 1101 aaKnown RBP9.42□□□□□ -0.9
CCL28-201ENST00000361115 NIP7Q9Y221 180 aaKnown RBP eCLIP9.42□□□□□ -0.9
CCL28-201ENST00000361115 MYO3BQ8WXR4 1341 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 SLC10A3P09131 477 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 RBM25P49756 843 aaKnown RBP9.41□□□□□ -0.9
CCL28-201ENST00000361115 HTRA3P83110 453 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 ARHGEF6Q15052 776 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 EAPPQ56P03 285 aaPredicted RBP9.41□□□□□ -0.9
CCL28-201ENST00000361115 BICDL1Q6ZP65 573 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 LARGE2Q8N3Y3 721 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 INHBEP58166 350 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 RGMBQ6NW40 437 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 IL17REQ8NFR9 667 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 ZNF428Q96B54 188 aa9.41□□□□□ -0.9
CCL28-201ENST00000361115 ZNF500O60304 480 aaPredicted RBP9.4□□□□□ -0.9
CCL28-201ENST00000361115 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.9
CCL28-201ENST00000361115 ANP32BQ92688 251 aaKnown RBP9.4□□□□□ -0.9
CCL28-201ENST00000361115 NLRP3Q96P20 1036 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms