RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 SMC3Q9UQE7 1217 aa14.83□□□□□ -0.04
UBA3-202ENST00000361055 UBR3Q6ZT12 1888 aa14.82□□□□□ -0.04
UBA3-202ENST00000361055 A0A087WZG4 1122 aa14.82□□□□□ -0.04
UBA3-202ENST00000361055 ERVV-1B6SEH8 477 aa14.82□□□□□ -0.04
UBA3-202ENST00000361055 PDIA4P13667 645 aaKnown RBP14.82□□□□□ -0.04
UBA3-202ENST00000361055 SF3B2Q13435 895 aaKnown RBP14.82□□□□□ -0.04
UBA3-202ENST00000361055 AK7Q96M32 723 aa14.82□□□□□ -0.04
UBA3-202ENST00000361055 PDCL3Q9H2J4 239 aa14.82□□□□□ -0.04
UBA3-202ENST00000361055 DIAPH3Q9NSV4 1193 aa14.82□□□□□ -0.04
UBA3-202ENST00000361055 RTCBQ9Y3I0 505 aaKnown RBP14.82□□□□□ -0.04
UBA3-202ENST00000361055 BCORQ6W2J9 1755 aa14.81□□□□□ -0.04
UBA3-202ENST00000361055 GNPATO15228 680 aa14.81□□□□□ -0.04
UBA3-202ENST00000361055 OS9Q13438 667 aaPredicted RBP14.81□□□□□ -0.04
UBA3-202ENST00000361055 GIGYF2Q6Y7W6 1299 aaKnown RBP14.81□□□□□ -0.04
UBA3-202ENST00000361055 GPATCH3Q96I76 525 aa14.81□□□□□ -0.04
UBA3-202ENST00000361055 ZSWIM6Q9HCJ5 1215 aa14.81□□□□□ -0.04
UBA3-202ENST00000361055 SH2B1Q9NRF2 756 aaPredicted RBP14.81□□□□□ -0.04
UBA3-202ENST00000361055 TBC1D2BQ9UPU7 963 aa14.81□□□□□ -0.04
UBA3-202ENST00000361055 F13A1P00488 732 aa14.81□□□□□ -0.04
UBA3-202ENST00000361055 IGKV5-2P06315 115 aa14.81□□□□□ -0.04
UBA3-202ENST00000361055 CWF19L2Q2TBE0 894 aaKnown RBP14.81□□□□□ -0.04
UBA3-202ENST00000361055 NEURL1BA8MQ27 555 aa14.8□□□□□ -0.04
UBA3-202ENST00000361055 TCIRG1Q13488 830 aa14.8□□□□□ -0.04
UBA3-202ENST00000361055 FOXD4L6Q3SYB3 417 aaPredicted RBP14.8□□□□□ -0.04
UBA3-202ENST00000361055 FOXD4L3Q6VB84 417 aaPredicted RBP14.8□□□□□ -0.04
UBA3-202ENST00000361055 EVI5LQ96CN4 794 aa14.8□□□□□ -0.04
UBA3-202ENST00000361055 CNPY2Q9Y2B0 182 aa14.8□□□□□ -0.04
UBA3-202ENST00000361055 R3HCC1Q9Y3T6 440 aaKnown RBP14.8□□□□□ -0.04
UBA3-202ENST00000361055 CASTP20810 708 aaKnown RBP14.8□□□□□ -0.04
UBA3-202ENST00000361055 HSP90AB3PQ58FF7 597 aa14.8□□□□□ -0.04
UBA3-202ENST00000361055 PDRG1Q9NUG6 133 aa14.8□□□□□ -0.04
UBA3-202ENST00000361055 C9orf78Q9NZ63 289 aaPredicted RBP14.8□□□□□ -0.04
UBA3-202ENST00000361055 C4AP0C0L4 1744 aa14.79□□□□□ -0.04
UBA3-202ENST00000361055 HIP1O00291 1037 aa14.79□□□□□ -0.04
UBA3-202ENST00000361055 IFIT2P09913 472 aaKnown RBP14.79□□□□□ -0.04
UBA3-202ENST00000361055 NECTIN1Q15223 517 aa14.79□□□□□ -0.04
UBA3-202ENST00000361055 HLFQ16534 295 aa14.79□□□□□ -0.04
UBA3-202ENST00000361055 CYP46A1Q9Y6A2 500 aa14.79□□□□□ -0.04
UBA3-202ENST00000361055 ATP5J2-PTCD1G3V325 749 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 CAMTA2O94983 1202 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 PTMAP06454 111 aaKnown RBP14.78□□□□□ -0.04
UBA3-202ENST00000361055 BAG6P46379 1132 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 PTH1RQ03431 593 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 CCDC125Q86Z20 511 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 CAMKK2Q96RR4 588 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 SCN7AQ01118 1682 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 RGL2O15211 777 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 ADRA2BP18089 450 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 EN1Q05925 392 aaPredicted RBP14.78□□□□□ -0.04
UBA3-202ENST00000361055 GCKRQ14397 625 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 CCDC191Q8NCU4 936 aa14.78□□□□□ -0.04
UBA3-202ENST00000361055 GRM8O00222 908 aa14.77□□□□□ -0.04
UBA3-202ENST00000361055 TRIM28Q13263 835 aaKnown RBP14.77□□□□□ -0.04
UBA3-202ENST00000361055 JAKMIP1Q96N16 626 aaKnown RBP14.77□□□□□ -0.04
UBA3-202ENST00000361055 ISCA1Q9BUE6 129 aa14.77□□□□□ -0.04
UBA3-202ENST00000361055 SNRKQ9NRH2 765 aa14.77□□□□□ -0.04
UBA3-202ENST00000361055 UTYO14607 1347 aa14.77□□□□□ -0.05
UBA3-202ENST00000361055 ZKSCAN1P17029 563 aaPredicted RBP14.77□□□□□ -0.05
UBA3-202ENST00000361055 GJB2P29033 226 aa14.77□□□□□ -0.05
UBA3-202ENST00000361055 EZH2Q15910 746 aaKnown RBP14.77□□□□□ -0.05
UBA3-202ENST00000361055 TRAPPC3LQ5T215 181 aa14.77□□□□□ -0.05
UBA3-202ENST00000361055 PRPF40BQ6NWY9 871 aaKnown RBP14.77□□□□□ -0.05
UBA3-202ENST00000361055 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.05
UBA3-202ENST00000361055 ARHGEF1Q92888 912 aaKnown RBP14.77□□□□□ -0.05
UBA3-202ENST00000361055 CWC25Q9NXE8 425 aaPredicted RBP14.77□□□□□ -0.05
UBA3-202ENST00000361055 NARFQ9UHQ1 456 aa14.77□□□□□ -0.05
UBA3-202ENST00000361055 MTMR6Q9Y217 621 aa14.77□□□□□ -0.05
UBA3-202ENST00000361055 ZNF652Q9Y2D9 606 aa14.77□□□□□ -0.05
UBA3-202ENST00000361055 AMIGO3Q86WK7 504 aa14.76□□□□□ -0.05
UBA3-202ENST00000361055 MAP4K1Q92918 833 aa14.76□□□□□ -0.05
UBA3-202ENST00000361055 MAP7D2Q96T17 732 aa14.76□□□□□ -0.05
UBA3-202ENST00000361055 LARP6Q9BRS8 491 aaKnown RBP14.76□□□□□ -0.05
UBA3-202ENST00000361055 ZPR1O75312 459 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 CPA1P15085 419 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 RFC4P35249 363 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 KIAA2012Q0VF49 1180 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 ADCK5Q3MIX3 580 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 CCDC83Q8IWF9 413 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 ALDH8A1Q9H2A2 487 aaPredicted RBP14.75□□□□□ -0.05
UBA3-202ENST00000361055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.75□□□□□ -0.05
UBA3-202ENST00000361055 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 LARGE1O95461 756 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 PSMA5P28066 241 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 SASS6Q6UVJ0 657 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 SMIM5Q71RC9 77 aa14.75□□□□□ -0.05
UBA3-202ENST00000361055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.74□□□□□ -0.05
UBA3-202ENST00000361055 DYNC1I1O14576 645 aa14.74□□□□□ -0.05
UBA3-202ENST00000361055 KDM4AO75164 1064 aa14.74□□□□□ -0.05
UBA3-202ENST00000361055 G3BP1Q13283 466 aaKnown RBP eCLIP14.74□□□□□ -0.05
UBA3-202ENST00000361055 AACSQ86V21 672 aa14.74□□□□□ -0.05
UBA3-202ENST00000361055 ZNF34Q8IZ26 560 aa14.74□□□□□ -0.05
UBA3-202ENST00000361055 FUCA2Q9BTY2 467 aa14.74□□□□□ -0.05
UBA3-202ENST00000361055 SASH1O94885 1247 aa14.74□□□□□ -0.05
UBA3-202ENST00000361055 CREB3L3Q68CJ9 461 aa14.74□□□□□ -0.05
UBA3-202ENST00000361055 TFCP2L1Q9NZI6 479 aa14.74□□□□□ -0.05
UBA3-202ENST00000361055 PA2G4Q9UQ80 394 aaKnown RBP14.74□□□□□ -0.05
UBA3-202ENST00000361055 ADCY5O95622 1261 aa14.73□□□□□ -0.05
UBA3-202ENST00000361055 ME3Q16798 604 aa14.73□□□□□ -0.05
UBA3-202ENST00000361055 ZNF827Q17R98 1081 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms