RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TSPYL6Q8N831 410 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 CCDC87Q9NVE4 849 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 NBPF3Q9H094 633 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 PLEKHG1Q9ULL1 1385 aa9.14□□□□□ -0.95
CLCN3-202ENST00000360642 BHMG1C9JSJ3 638 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-202ENST00000360642 NUCB1Q02818 461 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 LMOD3Q0VAK6 560 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 BECN1Q14457 450 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 ERFEQ4G0M1 354 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 FAM26DQ5JW98 314 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 BAP1Q92560 729 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 UPF2Q9HAU5 1272 aaKnown RBP9.13□□□□□ -0.95
CLCN3-202ENST00000360642 POTEB3A0JP26 581 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 POTEBQ6S5H4 581 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 OVOS2A0A0J9YW53 1432 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 OVOS2Q6IE36 1432 aa9.13□□□□□ -0.95
CLCN3-202ENST00000360642 C21orf2O43822 256 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 LTKP29376 864 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 PPP4CP60510 307 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 TTC21BQ7Z4L5 1316 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 TMC7Q7Z402 723 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 TNS4Q8IZW8 715 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 ABCC4O15439 1325 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 NALCNQ8IZF0 1738 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 ANTXR1Q9H6X2 564 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 SSH2Q76I76 1423 aa9.12□□□□□ -0.95
CLCN3-202ENST00000360642 FRAT2O75474 233 aaPredicted RBP9.11□□□□□ -0.95
CLCN3-202ENST00000360642 ERCC5P28715 1186 aaPredicted RBP9.11□□□□□ -0.95
CLCN3-202ENST00000360642 C8orf58Q8NAV2 365 aa9.11□□□□□ -0.95
CLCN3-202ENST00000360642 CHMP4BQ9H444 224 aaKnown RBP9.11□□□□□ -0.95
CLCN3-202ENST00000360642 ACEP12821 1306 aa9.11□□□□□ -0.95
CLCN3-202ENST00000360642 USP31Q70CQ4 1352 aa9.11□□□□□ -0.95
CLCN3-202ENST00000360642 EIF4A2Q14240 407 aaKnown RBP9.11□□□□□ -0.95
CLCN3-202ENST00000360642 TWISTNBQ3B726 338 aaPredicted RBP9.11□□□□□ -0.95
CLCN3-202ENST00000360642 ZNF516Q92618 1163 aa9.11□□□□□ -0.95
CLCN3-202ENST00000360642 USP6P35125 1406 aa9.11□□□□□ -0.95
CLCN3-202ENST00000360642 PTPRUQ92729 1446 aa9.11□□□□□ -0.95
CLCN3-202ENST00000360642 RGPD1P0DJD0 1748 aa9.11□□□□□ -0.95
CLCN3-202ENST00000360642 FAM83GA6ND36 823 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 LDLRAD1Q5T700 205 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 PDXDC2PQ6P474 469 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 TAS1R3Q7RTX0 852 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 CHD1LQ86WJ1 897 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 PEAK1Q9H792 1746 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 SIX5Q8N196 739 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 RAB6BQ9NRW1 208 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 SERTAD1Q9UHV2 236 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 ZBTB39O15060 712 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 HSP90B1P14625 803 aaKnown RBP9.1□□□□□ -0.95
CLCN3-202ENST00000360642 TSPAN10Q9H1Z9 355 aaPredicted RBP9.1□□□□□ -0.95
CLCN3-202ENST00000360642 KIF24Q5T7B8 1368 aa9.1□□□□□ -0.95
CLCN3-202ENST00000360642 GIMAP6Q6P9H5 292 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 LARGE2Q8N3Y3 721 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 GCC1Q96CN9 775 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 C22orf23Q9BZE7 217 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 ARHGAP23Q9P227 1491 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 SLIT1O75093 1534 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 ELL2O00472 640 aaPredicted RBP9.09□□□□□ -0.95
CLCN3-202ENST00000360642 ATP1A2P50993 1020 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 HDLBPQ00341 1268 aaKnown RBP9.09□□□□□ -0.95
CLCN3-202ENST00000360642 DCTN1Q14203 1278 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 SH3BP5LQ7L8J4 393 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 SIRT2Q8IXJ6 389 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 DCTN4Q9UJW0 460 aa9.09□□□□□ -0.95
CLCN3-202ENST00000360642 SULT6B1Q6IMI4 303 aa9.09□□□□□ -0.96
CLCN3-202ENST00000360642 SCG3Q8WXD2 468 aaKnown RBP9.09□□□□□ -0.96
CLCN3-202ENST00000360642 CHL1O00533 1208 aa9.08□□□□□ -0.96
CLCN3-202ENST00000360642 NT5DC4Q86YG4 428 aa9.08□□□□□ -0.96
CLCN3-202ENST00000360642 ASB16Q96NS5 453 aa9.08□□□□□ -0.96
CLCN3-202ENST00000360642 LNPKQ9C0E8 428 aa9.08□□□□□ -0.96
CLCN3-202ENST00000360642 PCDHGB7Q9Y5F8 929 aa9.08□□□□□ -0.96
CLCN3-202ENST00000360642 EMP3P54852 163 aa9.08□□□□□ -0.96
CLCN3-202ENST00000360642 FKBP4Q02790 459 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLCN3-202ENST00000360642 EAPPQ56P03 285 aaPredicted RBP9.08□□□□□ -0.96
CLCN3-202ENST00000360642 ANKRD13DQ6ZTN6 518 aa9.08□□□□□ -0.96
CLCN3-202ENST00000360642 NKX2-3Q8TAU0 364 aa9.08□□□□□ -0.96
CLCN3-202ENST00000360642 API5Q9BZZ5 524 aaKnown RBP9.08□□□□□ -0.96
CLCN3-202ENST00000360642 BMP2KLQ5H9B9 411 aa9.07□□□□□ -0.96
CLCN3-202ENST00000360642 NBPF14Q5TI25 921 aa9.07□□□□□ -0.96
CLCN3-202ENST00000360642 IQSEC3Q9UPP2 1182 aaPredicted RBP9.07□□□□□ -0.96
CLCN3-202ENST00000360642 DXOO77932 396 aaKnown RBP9.07□□□□□ -0.96
CLCN3-202ENST00000360642 HSP90AB2PQ58FF8 381 aa9.07□□□□□ -0.96
CLCN3-202ENST00000360642 ZNF662Q6ZS27 426 aa9.07□□□□□ -0.96
CLCN3-202ENST00000360642 SREK1Q8WXA9 508 aaKnown RBP9.07□□□□□ -0.96
CLCN3-202ENST00000360642 KIAA0232Q92628 1395 aa9.07□□□□□ -0.96
CLCN3-202ENST00000360642 SH3PXD2AQ5TCZ1 1133 aa9.07□□□□□ -0.96
CLCN3-202ENST00000360642 TBX22Q9Y458 520 aa9.07□□□□□ -0.96
CLCN3-202ENST00000360642 RGS12O14924 1447 aa9.06□□□□□ -0.96
CLCN3-202ENST00000360642 TTC21AQ8NDW8 1320 aa9.06□□□□□ -0.96
CLCN3-202ENST00000360642 CEBPAP49715 358 aaPredicted RBP9.06□□□□□ -0.96
CLCN3-202ENST00000360642 INTS3Q68E01 1043 aaKnown RBP9.06□□□□□ -0.96
CLCN3-202ENST00000360642 SLC26A8Q96RN1 970 aa9.06□□□□□ -0.96
CLCN3-202ENST00000360642 SLKQ9H2G2 1235 aaPredicted RBP9.06□□□□□ -0.96
CLCN3-202ENST00000360642 TMPRSS4Q9NRS4 437 aa9.06□□□□□ -0.96
CLCN3-202ENST00000360642 CRB1P82279 1406 aa9.06□□□□□ -0.96
CLCN3-202ENST00000360642 ANKRD45Q5TZF3 282 aa9.06□□□□□ -0.96
CLCN3-202ENST00000360642 ADGRD1Q6QNK2 874 aa9.06□□□□□ -0.96
CLCN3-202ENST00000360642 EID1Q9Y6B2 187 aa9.06□□□□□ -0.96
CLCN3-202ENST00000360642 ARHGEF10O15013 1369 aa9.05□□□□□ -0.96
CLCN3-202ENST00000360642 A6NHS1 94 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms