RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 FAM109BQ6ICB4 259 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE2-201ENST00000360515 NLRP10Q86W26 655 aa8.05□□□□□ -1.12
CDC42SE2-201ENST00000360515 ZNF219Q9P2Y4 722 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE2-201ENST00000360515 ZNF804BA4D1E1 1349 aa8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 ADGRA2Q96PE1 1338 aa8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 ZSWIM8A7E2V4 1837 aa8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 PLXNB2O15031 1838 aa8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 ZBTB12Q9Y330 459 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 ARIH1Q9Y4X5 557 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 PTPRFP10586 1907 aa8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 KIF6Q6ZMV9 814 aa8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 IFNL1Q8IU54 200 aa8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 CCDC24Q8N4L8 307 aa8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 KNSTRNQ9Y448 316 aa8.04□□□□□ -1.12
CDC42SE2-201ENST00000360515 ADM5C9JUS6 153 aa8.03□□□□□ -1.12
CDC42SE2-201ENST00000360515 PHACTR3Q96KR7 559 aa8.03□□□□□ -1.12
CDC42SE2-201ENST00000360515 RPAP1Q9BWH6 1393 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE2-201ENST00000360515 POTEFA5A3E0 1075 aa8.03□□□□□ -1.12
CDC42SE2-201ENST00000360515 ECE2O60344 883 aa8.02□□□□□ -1.12
CDC42SE2-201ENST00000360515 EIF4G2P78344 907 aaKnown RBP eCLIP8.02□□□□□ -1.12
CDC42SE2-201ENST00000360515 TCIRG1Q13488 830 aa8.02□□□□□ -1.12
CDC42SE2-201ENST00000360515 PODNQ7Z5L7 613 aa8.02□□□□□ -1.12
CDC42SE2-201ENST00000360515 TBC1D16Q8TBP0 767 aa8.02□□□□□ -1.12
CDC42SE2-201ENST00000360515 POLLQ9UGP5 575 aa8.02□□□□□ -1.12
CDC42SE2-201ENST00000360515 COLQQ9Y215 455 aaPredicted RBP8.02□□□□□ -1.12
CDC42SE2-201ENST00000360515 EGFRP00533 1210 aa8.02□□□□□ -1.13
CDC42SE2-201ENST00000360515 APOBEC3FQ8IUX4 373 aaKnown RBP8.02□□□□□ -1.13
CDC42SE2-201ENST00000360515 SHTN1A0MZ66 631 aa8.02□□□□□ -1.13
CDC42SE2-201ENST00000360515 SULF1Q8IWU6 871 aa8.02□□□□□ -1.13
CDC42SE2-201ENST00000360515 TTLL7Q6ZT98 887 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 BCL2L13Q9BXK5 485 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 SHISA4Q96DD7 197 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 MYOZ2Q9NPC6 264 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 GGA3Q9NZ52 723 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 STXBP5LQ9Y2K9 1186 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 FAM205AQ6ZU69 1335 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 SH3TC1Q8TE82 1336 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 HMOX1P09601 288 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 SCARF1Q14162 830 aa8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 TMX4Q9H1E5 349 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE2-201ENST00000360515 ARHGEF6Q15052 776 aa8□□□□□ -1.13
CDC42SE2-201ENST00000360515 WASHC4Q2M389 1173 aa8□□□□□ -1.13
CDC42SE2-201ENST00000360515 DDX60LQ5H9U9 1706 aaKnown RBP8□□□□□ -1.13
CDC42SE2-201ENST00000360515 HSPA5P11021 654 aaKnown RBP8□□□□□ -1.13
CDC42SE2-201ENST00000360515 HSP90B1P14625 803 aaKnown RBP8□□□□□ -1.13
CDC42SE2-201ENST00000360515 GPSM2P81274 684 aa8□□□□□ -1.13
CDC42SE2-201ENST00000360515 DACT2Q5SW24 774 aa8□□□□□ -1.13
CDC42SE2-201ENST00000360515 SAMD7Q7Z3H4 446 aa8□□□□□ -1.13
CDC42SE2-201ENST00000360515 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
CDC42SE2-201ENST00000360515 WNK4Q96J92 1243 aa8□□□□□ -1.13
CDC42SE2-201ENST00000360515 ZBTB7BO15156 539 aaPredicted RBP8□□□□□ -1.13
CDC42SE2-201ENST00000360515 LRIT3Q3SXY7 679 aa8□□□□□ -1.13
CDC42SE2-201ENST00000360515 DDX46Q7L014 1031 aaKnown RBP8□□□□□ -1.13
CDC42SE2-201ENST00000360515 NPM2Q86SE8 214 aaKnown RBP8□□□□□ -1.13
CDC42SE2-201ENST00000360515 DOCK2Q92608 1830 aa8□□□□□ -1.13
CDC42SE2-201ENST00000360515 ZNF236Q9UL36 1845 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 STRIP1Q5VSL9 837 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 PAXIP1Q6ZW49 1069 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 NKX2-3Q8TAU0 364 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 R3HDMLQ9H3Y0 253 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 HDAC9Q9UKV0 1011 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 DLL1O00548 723 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 RAD17O75943 681 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 TBC1D8O95759 1140 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 ARMC9Q7Z3E5 817 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 MS4A4AQ96JQ5 239 aa7.99□□□□□ -1.13
CDC42SE2-201ENST00000360515 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
CDC42SE2-201ENST00000360515 ANKRD13DQ6ZTN6 518 aa7.98□□□□□ -1.13
CDC42SE2-201ENST00000360515 PLBD2Q8NHP8 589 aa7.98□□□□□ -1.13
CDC42SE2-201ENST00000360515 DOCK1Q14185 1865 aa7.98□□□□□ -1.13
CDC42SE2-201ENST00000360515 CRISPLD2Q9H0B8 497 aa7.98□□□□□ -1.13
CDC42SE2-201ENST00000360515 USP17L8P0C7I0 530 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 PRKAR2BP31323 418 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 ANGEL2Q5VTE6 544 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 SYNGAP1Q96PV0 1343 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 XDHP47989 1333 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 USP17L3A6NCW0 530 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 USP17L4A6NCW7 530 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 IGF2BP3O00425 579 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 GJA8P48165 433 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 CAP1Q01518 475 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 TBC1D10BQ4KMP7 808 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 USP17L1Q7RTZ2 530 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 PLA2G12BQ9BX93 195 aa7.97□□□□□ -1.13
CDC42SE2-201ENST00000360515 ANKLE1Q8NAG6 615 aa7.96□□□□□ -1.13
CDC42SE2-201ENST00000360515 HELBQ8NG08 1087 aaPredicted RBP7.96□□□□□ -1.13
CDC42SE2-201ENST00000360515 H0YGN5 161 aa7.96□□□□□ -1.14
CDC42SE2-201ENST00000360515 PTPN12Q05209 780 aaKnown RBP7.96□□□□□ -1.14
CDC42SE2-201ENST00000360515 MRIQ9BWK5 157 aa7.96□□□□□ -1.14
CDC42SE2-201ENST00000360515 COA1Q9GZY4 146 aa7.96□□□□□ -1.14
CDC42SE2-201ENST00000360515 ASTN2O75129 1339 aaPredicted RBP7.96□□□□□ -1.14
CDC42SE2-201ENST00000360515 NPHP1O15259 732 aa7.96□□□□□ -1.14
CDC42SE2-201ENST00000360515 NFE2L2Q16236 605 aa7.96□□□□□ -1.14
CDC42SE2-201ENST00000360515 WNT10BO00744 389 aa7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 EN2P19622 333 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 TNNT2P45379 298 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 OTUD7BQ6GQQ9 843 aa7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 NBPF11Q86T75 865 aa7.95□□□□□ -1.14
CDC42SE2-201ENST00000360515 RBM27Q9P2N5 1060 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms