RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 CHRM1P11229 460 aaPredicted RBP11.53□□□□□ -0.56
SIN3A-201ENST00000360439 PHKG2P15735 406 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 SRRTQ9BXP5 876 aaKnown RBP11.53□□□□□ -0.56
SIN3A-201ENST00000360439 LRP2BPQ9P2M1 347 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 IPO7O95373 1038 aaKnown RBP11.53□□□□□ -0.56
SIN3A-201ENST00000360439 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
SIN3A-201ENST00000360439 H3BQV1 296 aa11.52□□□□□ -0.56
SIN3A-201ENST00000360439 SDSP20132 328 aa11.52□□□□□ -0.56
SIN3A-201ENST00000360439 LMAN1P49257 510 aa11.52□□□□□ -0.56
SIN3A-201ENST00000360439 DHX8Q14562 1220 aaKnown RBP11.52□□□□□ -0.56
SIN3A-201ENST00000360439 IFFO2Q5TF58 517 aa11.52□□□□□ -0.56
SIN3A-201ENST00000360439 MSL1Q68DK7 614 aa11.52□□□□□ -0.56
SIN3A-201ENST00000360439 INTS4Q96HW7 963 aaKnown RBP11.52□□□□□ -0.56
SIN3A-201ENST00000360439 MRFAP1Q9Y605 127 aa11.52□□□□□ -0.56
SIN3A-201ENST00000360439 ANKARQ7Z5J8 1434 aa11.52□□□□□ -0.56
SIN3A-201ENST00000360439 RPUSD2Q8IZ73 545 aaKnown RBP11.52□□□□□ -0.57
SIN3A-201ENST00000360439 TXLNBQ8N3L3 684 aa11.52□□□□□ -0.57
SIN3A-201ENST00000360439 UTP14AQ9BVJ6 771 aaKnown RBP11.52□□□□□ -0.57
SIN3A-201ENST00000360439 LRRFIP2Q9Y608 721 aaKnown RBP11.52□□□□□ -0.57
SIN3A-201ENST00000360439 KCNQ4P56696 695 aa11.52□□□□□ -0.57
SIN3A-201ENST00000360439 MICALL1Q8N3F8 863 aa11.52□□□□□ -0.57
SIN3A-201ENST00000360439 CCDC192P0DO97 292 aa11.52□□□□□ -0.57
SIN3A-201ENST00000360439 AOX1Q06278 1338 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 SYCE3A1L190 88 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 ERVV-2B6SEH9 535 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 TPD52L1Q16890 204 aaPredicted RBP11.51□□□□□ -0.57
SIN3A-201ENST00000360439 ZNF496Q96IT1 587 aaPredicted RBP11.51□□□□□ -0.57
SIN3A-201ENST00000360439 SH2B1Q9NRF2 756 aaPredicted RBP11.51□□□□□ -0.57
SIN3A-201ENST00000360439 CYP46A1Q9Y6A2 500 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 CDR1P51861 262 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 ENOX2Q16206 610 aaKnown RBP11.51□□□□□ -0.57
SIN3A-201ENST00000360439 CCDC152Q4G0S7 254 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 CEP85Q6P2H3 762 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 PSMD2Q13200 908 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 HSP90B2PQ58FF3 399 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
SIN3A-201ENST00000360439 NYXQ9GZU5 481 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 ACBD3Q9H3P7 528 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 YY1AP1Q9H869 796 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 CCDC87Q9NVE4 849 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 IDH1O75874 414 aaKnown RBP11.51□□□□□ -0.57
SIN3A-201ENST00000360439 AKAP17AQ02040 695 aaKnown RBP11.51□□□□□ -0.57
SIN3A-201ENST00000360439 KIF1BPQ96EK5 621 aa11.51□□□□□ -0.57
SIN3A-201ENST00000360439 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.51□□□□□ -0.57
SIN3A-201ENST00000360439 CDK12Q9NYV4 1490 aaPredicted RBP11.51□□□□□ -0.57
SIN3A-201ENST00000360439 MAP4K4O95819 1239 aaPredicted RBP11.5□□□□□ -0.57
SIN3A-201ENST00000360439 CCDC24Q8N4L8 307 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 TMOD2Q9NZR1 351 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 PEX19P40855 299 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 INF2Q27J81 1249 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 CNBD1Q8NA66 436 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 SSH2Q76I76 1423 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 ZC3H13Q5T200 1668 aaKnown RBP11.5□□□□□ -0.57
SIN3A-201ENST00000360439 ERICH2A1L162 156 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 CASQ1P31415 396 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 IKQ13123 557 aaPredicted RBP11.5□□□□□ -0.57
SIN3A-201ENST00000360439 NBPF20Q3BBV1 942 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 KSR2Q6VAB6 950 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 AKAP2Q9Y2D5 859 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 AXIN2Q9Y2T1 843 aa11.5□□□□□ -0.57
SIN3A-201ENST00000360439 PIK3C2BO00750 1634 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 ATP2B2Q01814 1243 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 SPATA31A6Q5VVP1 1343 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 VPS37CA5D8V6 355 aaPredicted RBP11.49□□□□□ -0.57
SIN3A-201ENST00000360439 SMARCA5O60264 1052 aaPredicted RBP11.49□□□□□ -0.57
SIN3A-201ENST00000360439 MARCH6O60337 910 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 RALYLQ86SE5 291 aaKnown RBP11.49□□□□□ -0.57
SIN3A-201ENST00000360439 ANKRD18AQ8IVF6 992 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 PDE1AP54750 535 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 PPP1R9BQ96SB3 815 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 BRMS1Q9HCU9 246 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 VIRMAQ69YN4 1812 aaKnown RBP11.49□□□□□ -0.57
SIN3A-201ENST00000360439 ADAMTS13Q76LX8 1427 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 GCKP35557 465 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 ESYT1Q9BSJ8 1104 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 ASAP1Q9ULH1 1129 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 TULP4Q9NRJ4 1543 aa11.49□□□□□ -0.57
SIN3A-201ENST00000360439 NUP133Q8WUM0 1156 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 TMX3Q96JJ7 454 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 CXorf56Q9H5V9 222 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 FRMPD1Q5SYB0 1578 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 LOC102724428A0A0B4J2F2 783 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 GLRX3O76003 335 aaKnown RBP11.48□□□□□ -0.57
SIN3A-201ENST00000360439 SIK1P57059 783 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 KRT85P78386 507 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 RRP12Q5JTH9 1297 aaKnown RBP11.48□□□□□ -0.57
SIN3A-201ENST00000360439 CCAR1Q8IX12 1150 aaKnown RBP11.48□□□□□ -0.57
SIN3A-201ENST00000360439 BABAM1Q9NWV8 329 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 CPSF1Q10570 1443 aaKnown RBP11.48□□□□□ -0.57
SIN3A-201ENST00000360439 DBN1Q16643 649 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 NSFL1CQ9UNZ2 370 aaKnown RBP11.48□□□□□ -0.57
SIN3A-201ENST00000360439 THRAP3Q9Y2W1 955 aaKnown RBP11.48□□□□□ -0.57
SIN3A-201ENST00000360439 SLC5A1P13866 664 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 CA8P35219 290 aa11.48□□□□□ -0.57
SIN3A-201ENST00000360439 NAA25Q14CX7 972 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms