RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ARL1P40616 181 aaPredicted RBP10.98□□□□□ -0.65
CUX1-203ENST00000360264 KRT83P78385 493 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 SLC8A3P57103 927 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 ZBTB43O43298 467 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 ADAMTS2O95450 1211 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 CD109Q6YHK3 1445 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 LDHAL6AQ6ZMR3 332 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 NDC80O14777 642 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 TIAM1Q13009 1591 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 AKNAQ7Z591 1439 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 GNG11P61952 73 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 GSTA5Q7RTV2 222 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 MIS18AQ9NYP9 233 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 ASIC1P78348 528 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 TAF12Q16514 161 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 MICU3Q86XE3 530 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 IQGAP2Q13576 1575 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 GLT8D2Q9H1C3 349 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 TXNDC16Q9P2K2 825 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 UBASH3AP57075 661 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 FAM13AO94988 1023 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 PPP1R2P41236 205 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 ZBTB16Q05516 673 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 VIMP08670 466 aaKnown RBP10.97□□□□□ -0.65
CUX1-203ENST00000360264 SETDB2Q96T68 719 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 DNA2P51530 1060 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 MXRA7P84157 204 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 ANKRD24Q8TF21 1146 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 CTAGE15A4D2H0 777 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 CTAGE9A4FU28 777 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 CTAGE8P0CG41 777 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 CA8P35219 290 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 CTAGE6Q86UF2 777 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 CTAGE4Q8IX94 777 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 JADE2Q9NQC1 790 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 STIM2Q9P246 746 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 PLS1Q14651 629 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 DNMBPQ6XZF7 1577 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 SNW1Q13573 536 aaKnown RBP10.97□□□□□ -0.65
CUX1-203ENST00000360264 NLRP3Q96P20 1036 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 MRVI1Q9Y6F6 885 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 ALDH1L1O75891 902 aa10.97□□□□□ -0.65
CUX1-203ENST00000360264 LMOD1P29536 600 aaPredicted RBP10.97□□□□□ -0.65
CUX1-203ENST00000360264 RARSP54136 660 aaKnown RBP10.97□□□□□ -0.65
CUX1-203ENST00000360264 CCT2P78371 535 aaKnown RBP10.97□□□□□ -0.65
CUX1-203ENST00000360264 BMS1Q14692 1282 aaKnown RBP10.97□□□□□ -0.65
CUX1-203ENST00000360264 C16orf45Q96MC5 204 aaPredicted RBP10.97□□□□□ -0.65
CUX1-203ENST00000360264 NOC2LQ9Y3T9 749 aaKnown RBP10.97□□□□□ -0.65
CUX1-203ENST00000360264 STK10O94804 968 aaKnown RBP10.96□□□□□ -0.65
CUX1-203ENST00000360264 TTC22Q5TAA0 569 aa10.96□□□□□ -0.65
CUX1-203ENST00000360264 RRAGBQ5VZM2 374 aa10.96□□□□□ -0.65
CUX1-203ENST00000360264 MSL1Q68DK7 614 aa10.96□□□□□ -0.65
CUX1-203ENST00000360264 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.96□□□□□ -0.65
CUX1-203ENST00000360264 CFAP58Q5T655 872 aa10.96□□□□□ -0.65
CUX1-203ENST00000360264 MTRF1LQ9UGC7 380 aaKnown RBP10.96□□□□□ -0.65
CUX1-203ENST00000360264 FAM184BQ9ULE4 1060 aa10.96□□□□□ -0.65
CUX1-203ENST00000360264 SPDYE3A6NKU9 549 aa10.96□□□□□ -0.65
CUX1-203ENST00000360264 ARID4AP29374 1257 aaPredicted RBP10.96□□□□□ -0.65
CUX1-203ENST00000360264 CCDC8Q9H0W5 538 aaPredicted RBP10.96□□□□□ -0.65
CUX1-203ENST00000360264 TRMT1Q9NXH9 659 aaKnown RBP10.96□□□□□ -0.65
CUX1-203ENST00000360264 STX8Q9UNK0 236 aa10.96□□□□□ -0.65
CUX1-203ENST00000360264 NAIPQ13075 1403 aa10.96□□□□□ -0.66
CUX1-203ENST00000360264 GJB2P29033 226 aa10.96□□□□□ -0.66
CUX1-203ENST00000360264 KIF5AQ12840 1032 aa10.96□□□□□ -0.66
CUX1-203ENST00000360264 NAPAP54920 295 aa10.96□□□□□ -0.66
CUX1-203ENST00000360264 ZNF622Q969S3 477 aaKnown RBP eCLIP10.96□□□□□ -0.661e-7■■□□□ 13.1
CUX1-203ENST00000360264 EPB41P11171 864 aaKnown RBP10.96□□□□□ -0.66
CUX1-203ENST00000360264 SSH1Q8WYL5 1049 aa10.96□□□□□ -0.66
CUX1-203ENST00000360264 CCDC6Q16204 474 aa10.96□□□□□ -0.66
CUX1-203ENST00000360264 KRT79Q5XKE5 535 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 TNNI2P48788 182 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 TNPO1Q92973 898 aaKnown RBP10.95□□□□□ -0.66
CUX1-203ENST00000360264 TOM1O60784 492 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 SCAF11Q99590 1463 aaKnown RBP10.95□□□□□ -0.66
CUX1-203ENST00000360264 ADCY5O95622 1261 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 CDAN1Q8IWY9 1227 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 EEF2P13639 858 aaKnown RBP10.95□□□□□ -0.66
CUX1-203ENST00000360264 SMC1BQ8NDV3 1235 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 KIFAP3Q92845 792 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 ANKRD2Q9GZV1 360 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 CCT6BQ92526 530 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 ADGRL1O94910 1474 aa10.95□□□□□ -0.66
CUX1-203ENST00000360264 HOOK2Q96ED9 719 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 AMOTL2Q9Y2J4 779 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 KIAA0586Q9BVV6 1533 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 CLUL1Q15846 466 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 WDR44Q5JSH3 913 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 EYA3Q99504 573 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 MSH6P52701 1360 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 SMTNP53814 917 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 RBM26Q5T8P6 1007 aaKnown RBP10.94□□□□□ -0.66
CUX1-203ENST00000360264 PRPF31Q8WWY3 499 aaKnown RBP10.94□□□□□ -0.66
CUX1-203ENST00000360264 DYNC1I1O14576 645 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 SH3BP5O60239 455 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 CYP7A1P22680 504 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 CPLX3Q8WVH0 158 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 SMARCA5O60264 1052 aaPredicted RBP10.94□□□□□ -0.66
CUX1-203ENST00000360264 RBM28Q9NW13 759 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms