RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 STAP2Q9UGK3 403 aa16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 RBM19Q9Y4C8 960 aaKnown RBP16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 CIAO1O76071 339 aa16.98■□□□□ 0.31
PDLIM5-203ENST00000359265 GTF2E1P29083 439 aaPredicted RBP16.98■□□□□ 0.31
PDLIM5-203ENST00000359265 TPTE2Q6XPS3 522 aa16.98■□□□□ 0.31
PDLIM5-203ENST00000359265 NBPF5PQ86XG9 351 aaPredicted RBP16.98■□□□□ 0.31
PDLIM5-203ENST00000359265 TTLL11Q8NHH1 800 aa16.98■□□□□ 0.31
PDLIM5-203ENST00000359265 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
PDLIM5-203ENST00000359265 A0A1B0GUL6 1792 aa16.97■□□□□ 0.31
PDLIM5-203ENST00000359265 ANKRD18BA2A2Z9 1011 aa16.97■□□□□ 0.31
PDLIM5-203ENST00000359265 EYA2O00167 538 aa16.97■□□□□ 0.31
PDLIM5-203ENST00000359265 NPHP1O15259 732 aa16.97■□□□□ 0.31
PDLIM5-203ENST00000359265 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
PDLIM5-203ENST00000359265 IL15P40933 162 aaPredicted RBP16.97■□□□□ 0.31
PDLIM5-203ENST00000359265 NFIXQ14938 502 aa16.97■□□□□ 0.31
PDLIM5-203ENST00000359265 NUTM1Q86Y26 1132 aa16.97■□□□□ 0.31
PDLIM5-203ENST00000359265 RTL9Q8NET4 1388 aa16.97■□□□□ 0.31
PDLIM5-203ENST00000359265 TTC41PQ6P2S7 1318 aa16.96■□□□□ 0.31
PDLIM5-203ENST00000359265 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
PDLIM5-203ENST00000359265 GSPT1P15170 499 aaKnown RBP16.96■□□□□ 0.31
PDLIM5-203ENST00000359265 AACSQ86V21 672 aa16.96■□□□□ 0.31
PDLIM5-203ENST00000359265 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.31
PDLIM5-203ENST00000359265 ARAP2Q8WZ64 1704 aa16.96■□□□□ 0.3
PDLIM5-203ENST00000359265 FOXN1O15353 648 aa16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 CDC45O75419 566 aa16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 HCLS1P14317 486 aaPredicted RBP16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 ITGA6P23229 1130 aa16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 ZNF594Q96JF6 807 aaPredicted RBP16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 GREM2Q9H772 168 aa16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 NRXN2Q9P2S2 1712 aa16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 ZNF609O15014 1411 aa16.95■□□□□ 0.3
PDLIM5-203ENST00000359265 TNRC6CQ9HCJ0 1690 aaKnown RBP16.94■□□□□ 0.3
PDLIM5-203ENST00000359265 ERC2O15083 957 aa16.94■□□□□ 0.3
PDLIM5-203ENST00000359265 TM4SF1P30408 202 aa16.94■□□□□ 0.3
PDLIM5-203ENST00000359265 TFCP2Q12800 502 aa16.94■□□□□ 0.3
PDLIM5-203ENST00000359265 ATG9AQ7Z3C6 839 aa16.94■□□□□ 0.3
PDLIM5-203ENST00000359265 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
PDLIM5-203ENST00000359265 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
PDLIM5-203ENST00000359265 C10orf71Q711Q0 1435 aa16.94■□□□□ 0.3
PDLIM5-203ENST00000359265 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 ST5P78524 1137 aa16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 ERFEQ4G0M1 354 aa16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 TNNI3KQ59H18 835 aa16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 SLC10A5Q5PT55 438 aa16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 EAF2Q96CJ1 260 aaPredicted RBP16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 GPR108Q9NPR9 543 aa16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 ECHDC1Q9NTX5 307 aa16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 FPGT-TNNI3KV9GXZ4 949 aa16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 TAF1P21675 1872 aa16.93■□□□□ 0.3
PDLIM5-203ENST00000359265 KIF13BQ9NQT8 1826 aa16.92■□□□□ 0.3
PDLIM5-203ENST00000359265 EIF5BO60841 1220 aaKnown RBP16.92■□□□□ 0.3
PDLIM5-203ENST00000359265 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
PDLIM5-203ENST00000359265 SERPINB2P05120 415 aa16.92■□□□□ 0.3
PDLIM5-203ENST00000359265 SDSP20132 328 aa16.92■□□□□ 0.3
PDLIM5-203ENST00000359265 LRRC24Q50LG9 513 aa16.92■□□□□ 0.3
PDLIM5-203ENST00000359265 TSHZ3Q63HK5 1081 aa16.92■□□□□ 0.3
PDLIM5-203ENST00000359265 POLRMTO00411 1230 aaKnown RBP16.91■□□□□ 0.3
PDLIM5-203ENST00000359265 CASC1Q6TDU7 716 aa16.91■□□□□ 0.3
PDLIM5-203ENST00000359265 PI4K2BQ8TCG2 481 aa16.91■□□□□ 0.3
PDLIM5-203ENST00000359265 PUS3Q9BZE2 481 aaKnown RBP16.91■□□□□ 0.3
PDLIM5-203ENST00000359265 UPF2Q9HAU5 1272 aaKnown RBP16.91■□□□□ 0.3
PDLIM5-203ENST00000359265 CNNM1Q9NRU3 951 aa16.91■□□□□ 0.3
PDLIM5-203ENST00000359265 CEP126Q9P2H0 1117 aa16.91■□□□□ 0.3
PDLIM5-203ENST00000359265 PARP3Q9Y6F1 533 aa16.91■□□□□ 0.3
PDLIM5-203ENST00000359265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.91■□□□□ 0.3
PDLIM5-203ENST00000359265 SF3B3Q15393 1217 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-203ENST00000359265 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
PDLIM5-203ENST00000359265 NLRP3Q96P20 1036 aa16.9■□□□□ 0.3
PDLIM5-203ENST00000359265 CCDC8Q9H0W5 538 aaPredicted RBP16.9■□□□□ 0.3
PDLIM5-203ENST00000359265 PRDM10Q9NQV6 1147 aa16.9■□□□□ 0.3
PDLIM5-203ENST00000359265 MMP10P09238 476 aa16.89■□□□□ 0.29
PDLIM5-203ENST00000359265 DPEP1P16444 411 aa16.89■□□□□ 0.29
PDLIM5-203ENST00000359265 TGFB2P61812 414 aa16.89■□□□□ 0.29
PDLIM5-203ENST00000359265 DDR1Q08345 913 aa16.89■□□□□ 0.29
PDLIM5-203ENST00000359265 PRR5LQ6MZQ0 368 aa16.89■□□□□ 0.29
PDLIM5-203ENST00000359265 TBC1D9Q6ZT07 1266 aa16.89■□□□□ 0.29
PDLIM5-203ENST00000359265 CDC5LQ99459 802 aaKnown RBP16.89■□□□□ 0.29
PDLIM5-203ENST00000359265 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
PDLIM5-203ENST00000359265 TRIM6-TRIM34B2RNG4 842 aa16.88■□□□□ 0.29
PDLIM5-203ENST00000359265 IGHMBP2P38935 993 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-203ENST00000359265 METTL24Q5JXM2 366 aa16.88■□□□□ 0.29
PDLIM5-203ENST00000359265 CNTROBQ8N137 903 aa16.88■□□□□ 0.29
PDLIM5-203ENST00000359265 ABHD8Q96I13 439 aa16.88■□□□□ 0.29
PDLIM5-203ENST00000359265 TLR7Q9NYK1 1049 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-203ENST00000359265 RIPOR2Q9Y4F9 1068 aa16.88■□□□□ 0.29
PDLIM5-203ENST00000359265 BRCA1P38398 1863 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-203ENST00000359265 ANKRD31Q8N7Z5 1873 aa16.88■□□□□ 0.29
PDLIM5-203ENST00000359265 KCNA3P22001 575 aa16.87■□□□□ 0.29
PDLIM5-203ENST00000359265 RILPL2Q969X0 211 aa16.87■□□□□ 0.29
PDLIM5-203ENST00000359265 MPHOSPH8Q99549 860 aa16.87■□□□□ 0.29
PDLIM5-203ENST00000359265 RNF181Q9P0P0 153 aa16.87■□□□□ 0.29
PDLIM5-203ENST00000359265 DBNLQ9UJU6 430 aaKnown RBP16.87■□□□□ 0.29
PDLIM5-203ENST00000359265 MROH5Q6ZUA9 1318 aa16.87■□□□□ 0.29
PDLIM5-203ENST00000359265 SBF1O95248 1867 aa16.86■□□□□ 0.29
PDLIM5-203ENST00000359265 MYH7P12883 1935 aa16.86■□□□□ 0.29
PDLIM5-203ENST00000359265 SEC24BO95487 1268 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms