RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 TGFB2P61812 414 aa16.41■□□□□ 0.22
CCDC197-201ENST00000359253 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
CCDC197-201ENST00000359253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.41■□□□□ 0.22
CCDC197-201ENST00000359253 RUFY2Q8WXA3 655 aa16.41■□□□□ 0.22
CCDC197-201ENST00000359253 FHDC1Q9C0D6 1143 aaPredicted RBP16.41■□□□□ 0.22
CCDC197-201ENST00000359253 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
CCDC197-201ENST00000359253 C4AP0C0L4 1744 aa16.4■□□□□ 0.22
CCDC197-201ENST00000359253 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
CCDC197-201ENST00000359253 LDHAL6AQ6ZMR3 332 aa16.4■□□□□ 0.22
CCDC197-201ENST00000359253 GREM2Q9H772 168 aa16.4■□□□□ 0.22
CCDC197-201ENST00000359253 LAMB2P55268 1798 aa16.4■□□□□ 0.22
CCDC197-201ENST00000359253 DDR1Q08345 913 aa16.39■□□□□ 0.21
CCDC197-201ENST00000359253 SF3B3Q15393 1217 aaKnown RBP16.39■□□□□ 0.21
CCDC197-201ENST00000359253 TSHZ3Q63HK5 1081 aa16.39■□□□□ 0.21
CCDC197-201ENST00000359253 ESYT1Q9BSJ8 1104 aa16.39■□□□□ 0.21
CCDC197-201ENST00000359253 USP26Q9BXU7 913 aa16.39■□□□□ 0.21
CCDC197-201ENST00000359253 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
CCDC197-201ENST00000359253 MROH5Q6ZUA9 1318 aa16.39■□□□□ 0.21
CCDC197-201ENST00000359253 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
CCDC197-201ENST00000359253 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
CCDC197-201ENST00000359253 LRRC24Q50LG9 513 aa16.38■□□□□ 0.21
CCDC197-201ENST00000359253 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
CCDC197-201ENST00000359253 ZNF594Q96JF6 807 aaPredicted RBP16.38■□□□□ 0.21
CCDC197-201ENST00000359253 CDC5LQ99459 802 aaKnown RBP16.38■□□□□ 0.21
CCDC197-201ENST00000359253 CNNM1Q9NRU3 951 aa16.38■□□□□ 0.21
CCDC197-201ENST00000359253 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
CCDC197-201ENST00000359253 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
CCDC197-201ENST00000359253 MCCP23508 829 aa16.37■□□□□ 0.21
CCDC197-201ENST00000359253 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
CCDC197-201ENST00000359253 BICDL1Q6ZP65 573 aa16.37■□□□□ 0.21
CCDC197-201ENST00000359253 ZNF609O15014 1411 aa16.36■□□□□ 0.21
CCDC197-201ENST00000359253 A0A1B0GUL7 405 aa16.36■□□□□ 0.21
CCDC197-201ENST00000359253 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
CCDC197-201ENST00000359253 IGHMBP2P38935 993 aaKnown RBP16.36■□□□□ 0.21
CCDC197-201ENST00000359253 METTL24Q5JXM2 366 aa16.36■□□□□ 0.21
CCDC197-201ENST00000359253 CCDC158Q5M9N0 1113 aa16.36■□□□□ 0.21
CCDC197-201ENST00000359253 NEUROD6Q96NK8 337 aa16.36■□□□□ 0.21
CCDC197-201ENST00000359253 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
CCDC197-201ENST00000359253 HAUS7Q99871 368 aa16.36■□□□□ 0.21
CCDC197-201ENST00000359253 BRIP1Q9BX63 1249 aa16.36■□□□□ 0.21
CCDC197-201ENST00000359253 PUS3Q9BZE2 481 aaKnown RBP16.36■□□□□ 0.21
CCDC197-201ENST00000359253 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
CCDC197-201ENST00000359253 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
CCDC197-201ENST00000359253 PDE8BO95263 885 aa16.35■□□□□ 0.21
CCDC197-201ENST00000359253 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
CCDC197-201ENST00000359253 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
CCDC197-201ENST00000359253 ZNF512BQ96KM6 892 aaPredicted RBP16.35■□□□□ 0.21
CCDC197-201ENST00000359253 NLRP3Q96P20 1036 aa16.35■□□□□ 0.21
CCDC197-201ENST00000359253 DBNDD2Q9BQY9 259 aa16.35■□□□□ 0.21
CCDC197-201ENST00000359253 DIAPH3Q9NSV4 1193 aa16.35■□□□□ 0.21
CCDC197-201ENST00000359253 RAD50Q92878 1312 aa16.35■□□□□ 0.21
CCDC197-201ENST00000359253 AK9Q5TCS8 1911 aa16.35■□□□□ 0.21
CCDC197-201ENST00000359253 DDX60Q8IY21 1712 aaKnown RBP16.34■□□□□ 0.21
CCDC197-201ENST00000359253 SGSM2O43147 1006 aa16.34■□□□□ 0.21
CCDC197-201ENST00000359253 PDE6BP35913 854 aa16.34■□□□□ 0.21
CCDC197-201ENST00000359253 ANAPC15P60006 121 aa16.34■□□□□ 0.21
CCDC197-201ENST00000359253 ST5P78524 1137 aa16.34■□□□□ 0.21
CCDC197-201ENST00000359253 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
CCDC197-201ENST00000359253 SNX21Q969T3 373 aa16.34■□□□□ 0.21
CCDC197-201ENST00000359253 BOLA2Q9H3K6 86 aa16.34■□□□□ 0.21
CCDC197-201ENST00000359253 TLR7Q9NYK1 1049 aaKnown RBP16.34■□□□□ 0.21
CCDC197-201ENST00000359253 RIC1Q4ADV7 1423 aa16.34■□□□□ 0.21
CCDC197-201ENST00000359253 FAM177BA6PVY3 158 aa16.33■□□□□ 0.2
CCDC197-201ENST00000359253 TIMM10P62072 90 aa16.33■□□□□ 0.2
CCDC197-201ENST00000359253 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
CCDC197-201ENST00000359253 ERFEQ4G0M1 354 aa16.33■□□□□ 0.2
CCDC197-201ENST00000359253 GORABQ5T7V8 394 aa16.33■□□□□ 0.2
CCDC197-201ENST00000359253 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.2
CCDC197-201ENST00000359253 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.2
CCDC197-201ENST00000359253 IL17RAQ96F46 866 aa16.33■□□□□ 0.2
CCDC197-201ENST00000359253 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
CCDC197-201ENST00000359253 KLRG2A4D1S0 409 aaPredicted RBP16.32■□□□□ 0.2
CCDC197-201ENST00000359253 NPHP1O15259 732 aa16.32■□□□□ 0.2
CCDC197-201ENST00000359253 RABEP1Q15276 862 aa16.32■□□□□ 0.2
CCDC197-201ENST00000359253 PUM3Q15397 648 aaKnown RBP16.32■□□□□ 0.2
CCDC197-201ENST00000359253 ERICH6Q7L0X2 663 aa16.32■□□□□ 0.2
CCDC197-201ENST00000359253 VGLL2Q8N8G2 317 aa16.32■□□□□ 0.2
CCDC197-201ENST00000359253 LPIN2Q92539 896 aa16.32■□□□□ 0.2
CCDC197-201ENST00000359253 CCDC85AQ96PX6 553 aaPredicted RBP16.32■□□□□ 0.2
CCDC197-201ENST00000359253 SPEF2Q9C093 1822 aa16.32■□□□□ 0.2
CCDC197-201ENST00000359253 C10orf71Q711Q0 1435 aa16.31■□□□□ 0.2
CCDC197-201ENST00000359253 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
CCDC197-201ENST00000359253 ANKRD18AQ8IVF6 992 aa16.31■□□□□ 0.2
CCDC197-201ENST00000359253 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
CCDC197-201ENST00000359253 XAGE2Q96GT9 111 aa16.31■□□□□ 0.2
CCDC197-201ENST00000359253 FSD1Q9BTV5 496 aa16.31■□□□□ 0.2
CCDC197-201ENST00000359253 H0YIN7 160 aa16.3■□□□□ 0.2
CCDC197-201ENST00000359253 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
CCDC197-201ENST00000359253 UQCRFS1P1P0C7P4 283 aa16.3■□□□□ 0.2
CCDC197-201ENST00000359253 SLC5A1P13866 664 aa16.3■□□□□ 0.2
CCDC197-201ENST00000359253 TTC39AQ5SRH9 613 aa16.3■□□□□ 0.2
CCDC197-201ENST00000359253 KBTBD3Q8NAB2 608 aa16.3■□□□□ 0.2
CCDC197-201ENST00000359253 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
CCDC197-201ENST00000359253 BSDC1Q9NW68 430 aaPredicted RBP16.3■□□□□ 0.2
CCDC197-201ENST00000359253 NRXN2Q9P2S2 1712 aa16.3■□□□□ 0.2
CCDC197-201ENST00000359253 FGFR2P21802 821 aa16.29■□□□□ 0.2
CCDC197-201ENST00000359253 KCNA3P22001 575 aa16.29■□□□□ 0.2
CCDC197-201ENST00000359253 NLGN2Q8NFZ4 835 aa16.29■□□□□ 0.2
CCDC197-201ENST00000359253 PIM2Q9P1W9 311 aa16.29■□□□□ 0.2
CCDC197-201ENST00000359253 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms