RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 PPP1R7Q15435 360 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 UAP1Q16222 522 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-201ENST00000358694 TMEM57Q8N5G2 664 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 SEC62Q99442 399 aaKnown RBP10.06□□□□□ -0.8
CTNND1-201ENST00000358694 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-201ENST00000358694 STIM2Q9P246 746 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 CCDC152Q4G0S7 254 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 CCDC129Q6ZRS4 1044 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 CCDC25Q86WR0 208 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-201ENST00000358694 USP25Q9UHP3 1055 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 PTGS1P23219 599 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 GJB2P29033 226 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 ZGPATQ8N5A5 531 aaKnown RBP10.06□□□□□ -0.8
CTNND1-201ENST00000358694 TBC1D31Q96DN5 1066 aa10.06□□□□□ -0.8
CTNND1-201ENST00000358694 SPOUT1Q5T280 376 aaKnown RBP10.05□□□□□ -0.8
CTNND1-201ENST00000358694 TMCO4Q5TGY1 634 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 CTAGE1Q96RT6 745 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 DAPK3O43293 454 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 HSPA1LP34931 641 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 NAA25Q14CX7 972 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 FAM204AQ9H8W3 233 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 POGZQ7Z3K3 1410 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 ARHGAP5Q13017 1502 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 CTAGE15A4D2H0 777 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 TACC1O75410 805 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 CTAGE8P0CG41 777 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 PPP2R5CQ13362 524 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 CTAGE6Q86UF2 777 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 CTAGE4Q8IX94 777 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 EVI5LQ96CN4 794 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 ZNF644Q9H582 1327 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-201ENST00000358694 PLEKHH1Q9ULM0 1364 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 HARSP12081 509 aaKnown RBP10.05□□□□□ -0.8
CTNND1-201ENST00000358694 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-201ENST00000358694 CEP120Q8N960 986 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 CYP7A1P22680 504 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 SEPT14Q6ZU15 432 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 FAM184BQ9ULE4 1060 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 AGTPBP1Q9UPW5 1226 aa10.05□□□□□ -0.8
CTNND1-201ENST00000358694 WDR46O15213 610 aaKnown RBP10.04□□□□□ -0.8
CTNND1-201ENST00000358694 CIB2O75838 187 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 UQCRFS1P1P0C7P4 283 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 BRDTQ58F21 947 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-201ENST00000358694 SETDB2Q96T68 719 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 ZNF408Q9H9D4 720 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 OPA1O60313 960 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 SETDB1Q15047 1291 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 NUDT16Q96DE0 195 aaKnown RBP10.04□□□□□ -0.8
CTNND1-201ENST00000358694 KRT23Q9C075 422 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 SMARCA2P51531 1590 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 ATP5J2-PTCD1G3V325 749 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 CCDC121Q6ZUS5 278 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 HS2ST1Q7LGA3 356 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 ANKFY1Q9P2R3 1169 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 SLC4A4Q9Y6R1 1079 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 SYKP43405 635 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 HSP90AA4PQ58FG1 418 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 PSMA7O14818 248 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 ERCC3P19447 782 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 PSMD6Q15008 389 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 CLUL1Q15846 466 aa10.04□□□□□ -0.8
CTNND1-201ENST00000358694 KRT5P13647 590 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 ERCC5P28715 1186 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 UBASH3AP57075 661 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 FLIIQ13045 1269 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 PPP2R5DQ14738 602 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 ZNF804AQ7Z570 1209 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 NCAPGQ9BPX3 1015 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 RSPH14Q9UHP6 348 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 TLDC2A0PJX2 215 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 RRP9O43818 475 aaKnown RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 RFC1P35251 1148 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 NBPF8Q3BBV2 869 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 NBPF14Q5TI25 921 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 IL27Q8NEV9 243 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 JAKMIP2Q96AA8 810 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 NEK1Q96PY6 1258 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 THUMPD2Q9BTF0 503 aaKnown RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 ANKRD50Q9ULJ7 1429 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 F6X3S4 739 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 BMP15O95972 392 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 SARNPP82979 210 aaKnown RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 GABPB2Q8TAK5 448 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 WDR66Q8TBY9 1149 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 MIPOL1Q8TD10 442 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 ESR2Q92731 530 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 RAB3IPQ96QF0 476 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 CLSTN2Q9H4D0 955 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 CASQ2O14958 399 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 STX10O60499 249 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 GNAQP50148 359 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 BIRC3Q13489 604 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 DBF4Q9UBU7 674 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-201ENST00000358694 MAP3K2Q9Y2U5 619 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 MCM5P33992 734 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 KRT9P35527 623 aa10.03□□□□□ -0.8
CTNND1-201ENST00000358694 KRT79Q5XKE5 535 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms