RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 KLHDC4Q8TBB5 520 aa11.65□□□□□ -0.55
RNF40-202ENST00000357890 LSG1Q9H089 658 aaKnown RBP11.65□□□□□ -0.55
RNF40-202ENST00000357890 ME3Q16798 604 aa11.64□□□□□ -0.55
RNF40-202ENST00000357890 ZSCAN25Q6NSZ9 544 aa11.64□□□□□ -0.55
RNF40-202ENST00000357890 DDX41Q9UJV9 622 aaKnown RBP11.64□□□□□ -0.55
RNF40-202ENST00000357890 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
RNF40-202ENST00000357890 SFPQP23246 707 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNF40-202ENST00000357890 ME1P48163 572 aa11.64□□□□□ -0.55
RNF40-202ENST00000357890 CBX8Q9HC52 389 aa11.64□□□□□ -0.55
RNF40-202ENST00000357890 KNDC1Q76NI1 1749 aa11.64□□□□□ -0.55
RNF40-202ENST00000357890 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
RNF40-202ENST00000357890 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
RNF40-202ENST00000357890 TMC6Q7Z403 805 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 MTMR6Q9Y217 621 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 AKAP12Q02952 1782 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 GUCY1B3Q02153 619 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 CDC37L1Q7L3B6 337 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 DHX37Q8IY37 1157 aaKnown RBP11.63□□□□□ -0.55
RNF40-202ENST00000357890 KCNF1Q9H3M0 494 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 DDX21Q9NR30 783 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNF40-202ENST00000357890 BIN1O00499 593 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 TXLNBQ8N3L3 684 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 ERO1AQ96HE7 468 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 DRC1Q96MC2 740 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 MYD88Q99836 296 aa11.63□□□□□ -0.55
RNF40-202ENST00000357890 SETD1AO15047 1707 aaKnown RBP11.63□□□□□ -0.55
RNF40-202ENST00000357890 DIP2AQ14689 1571 aa11.62□□□□□ -0.55
RNF40-202ENST00000357890 ISM2Q6H9L7 571 aa11.62□□□□□ -0.55
RNF40-202ENST00000357890 CFAP45Q9UL16 551 aa11.62□□□□□ -0.55
RNF40-202ENST00000357890 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.62□□□□□ -0.55
RNF40-202ENST00000357890 PIP4K2AP48426 406 aaPredicted RBP11.62□□□□□ -0.55
RNF40-202ENST00000357890 MCM6Q14566 821 aa11.62□□□□□ -0.55
RNF40-202ENST00000357890 BICC1Q9H694 974 aaKnown RBP11.62□□□□□ -0.55
RNF40-202ENST00000357890 PXDNLA1KZ92 1463 aa11.62□□□□□ -0.55
RNF40-202ENST00000357890 ZNF75DP51815 510 aa11.62□□□□□ -0.55
RNF40-202ENST00000357890 SLC39A6Q13433 755 aa11.62□□□□□ -0.55
RNF40-202ENST00000357890 KRT28Q7Z3Y7 464 aa11.62□□□□□ -0.55
RNF40-202ENST00000357890 NAT10Q9H0A0 1025 aaKnown RBP11.62□□□□□ -0.55
RNF40-202ENST00000357890 DDX19AQ9NUU7 478 aaKnown RBP11.62□□□□□ -0.55
RNF40-202ENST00000357890 SPTLC3Q9NUV7 552 aa11.62□□□□□ -0.55
RNF40-202ENST00000357890 A0A0G2JS52 829 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 CPLX1O14810 134 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 PHACTR2O75167 634 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 CCT2P78371 535 aaKnown RBP11.61□□□□□ -0.55
RNF40-202ENST00000357890 KRT32Q14532 448 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 ARID5BQ14865 1188 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 KMT5BQ4FZB7 885 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 CEP57L1Q8IYX8 460 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 CACTINQ8WUQ7 758 aaKnown RBP11.61□□□□□ -0.55
RNF40-202ENST00000357890 BRF1Q92994 677 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 EDC3Q96F86 508 aaKnown RBP11.61□□□□□ -0.55
RNF40-202ENST00000357890 TPCN1Q9ULQ1 816 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 NDUFB9Q9Y6M9 179 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 LIG1P18858 919 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 NEK1Q96PY6 1258 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 TM6SF1Q9BZW5 370 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 A0A087WWV3 80 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 SERPINC1P01008 464 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 SLFN14P0C7P3 912 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 TTC6Q86TZ1 520 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 ERCC4Q92889 916 aaPredicted RBP11.61□□□□□ -0.55
RNF40-202ENST00000357890 SUCLG2Q96I99 432 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 ORAI2Q96SN7 254 aa11.61□□□□□ -0.55
RNF40-202ENST00000357890 SLC27A2O14975 620 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 WASHC4Q2M389 1173 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 DDX46Q7L014 1031 aaKnown RBP11.6□□□□□ -0.55
RNF40-202ENST00000357890 ATP5J2-PTCD1G3V325 749 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 PTCD1O75127 700 aaKnown RBP11.6□□□□□ -0.55
RNF40-202ENST00000357890 COPS6Q7L5N1 327 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 ANKRD7Q92527 254 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 C19orf44Q9H6X5 657 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 H0YHG0 523 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 SETQ01105 290 aaPredicted RBP11.6□□□□□ -0.55
RNF40-202ENST00000357890 MTX1Q13505 466 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 UBE3BQ7Z3V4 1068 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
RNF40-202ENST00000357890 EAF2Q96CJ1 260 aaPredicted RBP11.6□□□□□ -0.55
RNF40-202ENST00000357890 CEMIPQ8WUJ3 1361 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 ANKRD13DQ6ZTN6 518 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 CAPN2P17655 700 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 FAM193AP78312 1265 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 ZSCAN26Q16670 478 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 ARHGEF25Q86VW2 580 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 STK11IPQ8N1F8 1099 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 PEAK1Q9H792 1746 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 KIF2AO00139 706 aaPredicted RBP11.59□□□□□ -0.55
RNF40-202ENST00000357890 HSP90AA4PQ58FG1 418 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 CADPS2Q86UW7 1296 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 AOPEPQ8N6M6 819 aa11.59□□□□□ -0.55
RNF40-202ENST00000357890 A0A0D9SFI3 127 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 ZNF790Q6PG37 636 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 SYNE3Q6ZMZ3 975 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 Q6ZUG5 572 aa11.58□□□□□ -0.56
RNF40-202ENST00000357890 TTC14Q96N46 770 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms