RNA–Protein interactions for RNA: ENST00000357884.8

C19orf47-201, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 5

Gene C19orf47, Length 1,774 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-201ENST00000357884 ALDH8A1Q9H2A2 487 aaPredicted RBP20.48■□□□□ 0.87
C19orf47-201ENST00000357884 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
C19orf47-201ENST00000357884 CSF1RP07333 972 aa20.47■□□□□ 0.87
C19orf47-201ENST00000357884 GPTP24298 496 aa20.47■□□□□ 0.87
C19orf47-201ENST00000357884 AK2P54819 239 aa20.47■□□□□ 0.87
C19orf47-201ENST00000357884 CCDC173Q0VFZ6 552 aa20.47■□□□□ 0.87
C19orf47-201ENST00000357884 CLEC4GQ6UXB4 293 aa20.47■□□□□ 0.87
C19orf47-201ENST00000357884 TMEM87AQ8NBN3 555 aa20.47■□□□□ 0.87
C19orf47-201ENST00000357884 PPP1R9BQ96SB3 815 aa20.47■□□□□ 0.87
C19orf47-201ENST00000357884 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
C19orf47-201ENST00000357884 MYH14Q7Z406 1995 aaKnown RBP20.47■□□□□ 0.87
C19orf47-201ENST00000357884 CIAO1O76071 339 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 ATP5JP18859 108 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 ILDR2Q71H61 639 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 KLHDC4Q8TBB5 520 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 FAM89AQ96GI7 184 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 CAMKK2Q96RR4 588 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 TAF1LQ8IZX4 1826 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 HSP90B1P14625 803 aaKnown RBP20.46■□□□□ 0.87
C19orf47-201ENST00000357884 PSMA5P28066 241 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 TSGA10IPQ3SY00 556 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 CAVIN1Q6NZI2 390 aaKnown RBP20.46■□□□□ 0.87
C19orf47-201ENST00000357884 GPT2Q8TD30 523 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 TRMT112Q9UI30 125 aaKnown RBP20.46■□□□□ 0.87
C19orf47-201ENST00000357884 CYP46A1Q9Y6A2 500 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 MED23Q9ULK4 1368 aa20.46■□□□□ 0.87
C19orf47-201ENST00000357884 NUP98P52948 1817 aa20.45■□□□□ 0.87
C19orf47-201ENST00000357884 IL15P40933 162 aaPredicted RBP20.45■□□□□ 0.86
C19orf47-201ENST00000357884 PTH1RQ03431 593 aa20.45■□□□□ 0.86
C19orf47-201ENST00000357884 CCDC57Q2TAC2 916 aa20.45■□□□□ 0.86
C19orf47-201ENST00000357884 RNF20Q5VTR2 975 aa20.45■□□□□ 0.86
C19orf47-201ENST00000357884 RUFY3Q7L099 469 aa20.45■□□□□ 0.86
C19orf47-201ENST00000357884 ANP32BQ92688 251 aaKnown RBP20.45■□□□□ 0.86
C19orf47-201ENST00000357884 GPR108Q9NPR9 543 aa20.45■□□□□ 0.86
C19orf47-201ENST00000357884 HMG20BQ9P0W2 317 aa20.45■□□□□ 0.86
C19orf47-201ENST00000357884 UBN2Q6ZU65 1347 aa20.45■□□□□ 0.86
C19orf47-201ENST00000357884 NASPP49321 788 aaPredicted RBP20.44■□□□□ 0.86
C19orf47-201ENST00000357884 ATP6V1DQ9Y5K8 247 aa20.44■□□□□ 0.86
C19orf47-201ENST00000357884 RPAP1Q9BWH6 1393 aaPredicted RBP20.44■□□□□ 0.86
C19orf47-201ENST00000357884 GNPATO15228 680 aa20.44■□□□□ 0.86
C19orf47-201ENST00000357884 CASTP20810 708 aaKnown RBP20.44■□□□□ 0.86
C19orf47-201ENST00000357884 SYAP1Q96A49 352 aaPredicted RBP20.44■□□□□ 0.86
C19orf47-201ENST00000357884 CCDC8Q9H0W5 538 aaPredicted RBP20.44■□□□□ 0.86
C19orf47-201ENST00000357884 PDRG1Q9NUG6 133 aa20.44■□□□□ 0.86
C19orf47-201ENST00000357884 EYA2O00167 538 aa20.43■□□□□ 0.86
C19orf47-201ENST00000357884 IRS4O14654 1257 aaPredicted RBP20.43■□□□□ 0.86
C19orf47-201ENST00000357884 PDE8AO60658 829 aa20.43■□□□□ 0.86
C19orf47-201ENST00000357884 RPS6KA4O75676 772 aa20.43■□□□□ 0.86
C19orf47-201ENST00000357884 NMIQ13287 307 aaPredicted RBP20.43■□□□□ 0.86
C19orf47-201ENST00000357884 SMIM5Q71RC9 77 aa20.43■□□□□ 0.86
C19orf47-201ENST00000357884 UPF1Q92900 1129 aaKnown RBP eCLIP20.43■□□□□ 0.86
C19orf47-201ENST00000357884 RBM8AQ9Y5S9 174 aaKnown RBP20.43■□□□□ 0.86
C19orf47-201ENST00000357884 HMGB2P26583 209 aaKnown RBP20.42■□□□□ 0.86
C19orf47-201ENST00000357884 CLCN1P35523 988 aa20.42■□□□□ 0.86
C19orf47-201ENST00000357884 CTSWP56202 376 aa20.42■□□□□ 0.86
C19orf47-201ENST00000357884 ANKRD1Q15327 319 aa20.42■□□□□ 0.86
C19orf47-201ENST00000357884 TNNI3KQ59H18 835 aa20.42■□□□□ 0.86
C19orf47-201ENST00000357884 CREB3L3Q68CJ9 461 aa20.42■□□□□ 0.86
C19orf47-201ENST00000357884 PRPF40BQ6NWY9 871 aaKnown RBP20.42■□□□□ 0.86
C19orf47-201ENST00000357884 FPGT-TNNI3KV9GXZ4 949 aa20.42■□□□□ 0.86
C19orf47-201ENST00000357884 SH3TC1Q8TE82 1336 aa20.42■□□□□ 0.86
C19orf47-201ENST00000357884 NCLP19338 710 aaKnown RBP20.41■□□□□ 0.86
C19orf47-201ENST00000357884 TFCP2Q12800 502 aa20.41■□□□□ 0.86
C19orf47-201ENST00000357884 IFIT5Q13325 482 aaKnown RBP20.41■□□□□ 0.86
C19orf47-201ENST00000357884 LRSAM1Q6UWE0 723 aa20.41■□□□□ 0.86
C19orf47-201ENST00000357884 ATG9AQ7Z3C6 839 aa20.41■□□□□ 0.86
C19orf47-201ENST00000357884 JAKMIP1Q96N16 626 aaKnown RBP20.41■□□□□ 0.86
C19orf47-201ENST00000357884 FSD1Q9BTV5 496 aa20.41■□□□□ 0.86
C19orf47-201ENST00000357884 UTP14AQ9BVJ6 771 aaKnown RBP20.41■□□□□ 0.86
C19orf47-201ENST00000357884 RTCBQ9Y3I0 505 aaKnown RBP20.41■□□□□ 0.86
C19orf47-201ENST00000357884 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.41■□□□□ 0.86
C19orf47-201ENST00000357884 C4BP0C0L5 1744 aa20.41■□□□□ 0.86
C19orf47-201ENST00000357884 BCORQ6W2J9 1755 aa20.41■□□□□ 0.86
C19orf47-201ENST00000357884 ZSCAN22P10073 491 aaPredicted RBP20.41■□□□□ 0.86
C19orf47-201ENST00000357884 USPL1Q5W0Q7 1092 aa20.41■□□□□ 0.86
C19orf47-201ENST00000357884 RRAGDQ9NQL2 400 aaPredicted RBP20.41■□□□□ 0.86
C19orf47-201ENST00000357884 SMC3Q9UQE7 1217 aa20.41■□□□□ 0.86
C19orf47-201ENST00000357884 PHF14O94880 888 aa20.4■□□□□ 0.86
C19orf47-201ENST00000357884 NOL8Q76FK4 1167 aaKnown RBP20.4■□□□□ 0.86
C19orf47-201ENST00000357884 TTLL11Q8NHH1 800 aa20.4■□□□□ 0.86
C19orf47-201ENST00000357884 BOLA2Q9H3K6 86 aa20.4■□□□□ 0.86
C19orf47-201ENST00000357884 TLR7Q9NYK1 1049 aaKnown RBP20.4■□□□□ 0.86
C19orf47-201ENST00000357884 RGPD3A6NKT7 1758 aaPredicted RBP20.4■□□□□ 0.86
C19orf47-201ENST00000357884 RGPD4Q7Z3J3 1758 aa20.4■□□□□ 0.86
C19orf47-201ENST00000357884 STX6O43752 255 aa20.39■□□□□ 0.86
C19orf47-201ENST00000357884 KRT32Q14532 448 aa20.39■□□□□ 0.86
C19orf47-201ENST00000357884 HS1BP3Q53T59 392 aa20.39■□□□□ 0.86
C19orf47-201ENST00000357884 SUSD4Q5VX71 490 aa20.39■□□□□ 0.86
C19orf47-201ENST00000357884 TRIM44Q96DX7 344 aaPredicted RBP20.39■□□□□ 0.86
C19orf47-201ENST00000357884 NIP7Q9Y221 180 aaKnown RBP eCLIP20.39■□□□□ 0.86
C19orf47-201ENST00000357884 SLC27A2O14975 620 aa20.39■□□□□ 0.85
C19orf47-201ENST00000357884 FAM227BQ96M60 508 aa20.39■□□□□ 0.85
C19orf47-201ENST00000357884 TMEM63CQ9P1W3 806 aa20.39■□□□□ 0.85
C19orf47-201ENST00000357884 DBNLQ9UJU6 430 aaKnown RBP20.39■□□□□ 0.85
C19orf47-201ENST00000357884 CSPP1Q1MSJ5 1256 aa20.38■□□□□ 0.85
C19orf47-201ENST00000357884 TAF7LQ5H9L4 462 aa20.38■□□□□ 0.85
C19orf47-201ENST00000357884 AMIGO3Q86WK7 504 aa20.38■□□□□ 0.85
C19orf47-201ENST00000357884 HAUS7Q99871 368 aa20.38■□□□□ 0.85
C19orf47-201ENST00000357884 TFCP2L1Q9NZI6 479 aa20.38■□□□□ 0.85
C19orf47-201ENST00000357884 NARFQ9UHQ1 456 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms