RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
LINC01560-201ENST00000357412 CCDC85AQ96PX6 553 aaPredicted RBP13.19□□□□□ -0.3
LINC01560-201ENST00000357412 CHMP4AQ9BY43 222 aa13.19□□□□□ -0.3
LINC01560-201ENST00000357412 RTL9Q8NET4 1388 aa13.19□□□□□ -0.3
LINC01560-201ENST00000357412 NUP98P52948 1817 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 ECE2O60344 883 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 EGFRP00533 1210 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 IGKV5-2P06315 115 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 RPS12P25398 132 aaKnown RBP13.18□□□□□ -0.3
LINC01560-201ENST00000357412 CCDC152Q4G0S7 254 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 SAMD7Q7Z3H4 446 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 ZC3H12CQ9C0D7 883 aaKnown RBP13.18□□□□□ -0.3
LINC01560-201ENST00000357412 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 DUOX1Q9NRD9 1551 aa13.18□□□□□ -0.3
LINC01560-201ENST00000357412 PI4KAP2A4QPH2 592 aa13.17□□□□□ -0.3
LINC01560-201ENST00000357412 GRM1Q13255 1194 aa13.17□□□□□ -0.3
LINC01560-201ENST00000357412 DLK2Q6UY11 383 aa13.17□□□□□ -0.3
LINC01560-201ENST00000357412 PI4KAP1Q8N8J0 262 aa13.17□□□□□ -0.3
LINC01560-201ENST00000357412 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
LINC01560-201ENST00000357412 CCDC88AQ3V6T2 1871 aa13.16□□□□□ -0.3
LINC01560-201ENST00000357412 AOC2O75106 756 aa13.16□□□□□ -0.3
LINC01560-201ENST00000357412 UFL1O94874 794 aa13.16□□□□□ -0.3
LINC01560-201ENST00000357412 VIL1P09327 827 aaKnown RBP13.16□□□□□ -0.3
LINC01560-201ENST00000357412 MAP2K2P36507 400 aa13.16□□□□□ -0.3
LINC01560-201ENST00000357412 TBC1D10BQ4KMP7 808 aaPredicted RBP13.16□□□□□ -0.3
LINC01560-201ENST00000357412 USP48Q86UV5 1035 aa13.16□□□□□ -0.3
LINC01560-201ENST00000357412 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
LINC01560-201ENST00000357412 ZNF408Q9H9D4 720 aa13.16□□□□□ -0.3
LINC01560-201ENST00000357412 ANKIB1Q9P2G1 1089 aa13.16□□□□□ -0.3
LINC01560-201ENST00000357412 COL4A1P02462 1669 aa13.15□□□□□ -0.3
LINC01560-201ENST00000357412 CTSWP56202 376 aa13.15□□□□□ -0.3
LINC01560-201ENST00000357412 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
LINC01560-201ENST00000357412 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
LINC01560-201ENST00000357412 G2E3Q7L622 706 aa13.15□□□□□ -0.3
LINC01560-201ENST00000357412 ANKRD18AQ8IVF6 992 aa13.15□□□□□ -0.3
LINC01560-201ENST00000357412 TTLL11Q8NHH1 800 aa13.15□□□□□ -0.3
LINC01560-201ENST00000357412 CACNA1SQ13698 1873 aa13.14□□□□□ -0.31
LINC01560-201ENST00000357412 NEURL1BA8MQ27 555 aa13.14□□□□□ -0.31
LINC01560-201ENST00000357412 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
LINC01560-201ENST00000357412 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
LINC01560-201ENST00000357412 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
LINC01560-201ENST00000357412 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
LINC01560-201ENST00000357412 XDHP47989 1333 aa13.13□□□□□ -0.31
LINC01560-201ENST00000357412 IL16Q14005 1332 aa13.13□□□□□ -0.31
LINC01560-201ENST00000357412 WTIPA6NIX2 430 aaPredicted RBP13.13□□□□□ -0.31
LINC01560-201ENST00000357412 H7C1W4 665 aa13.13□□□□□ -0.31
LINC01560-201ENST00000357412 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
LINC01560-201ENST00000357412 NEXNQ0ZGT2 675 aa13.13□□□□□ -0.31
LINC01560-201ENST00000357412 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
LINC01560-201ENST00000357412 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
LINC01560-201ENST00000357412 KRT26Q7Z3Y9 468 aa13.13□□□□□ -0.31
LINC01560-201ENST00000357412 CDC5LQ99459 802 aaKnown RBP13.13□□□□□ -0.31
LINC01560-201ENST00000357412 GREM2Q9H772 168 aa13.13□□□□□ -0.31
LINC01560-201ENST00000357412 BSDC1Q9NW68 430 aaPredicted RBP13.13□□□□□ -0.31
LINC01560-201ENST00000357412 MINPP1Q9UNW1 487 aa13.13□□□□□ -0.31
LINC01560-201ENST00000357412 ADM5C9JUS6 153 aa13.12□□□□□ -0.31
LINC01560-201ENST00000357412 G3V3G9 751 aa13.12□□□□□ -0.31
LINC01560-201ENST00000357412 ZNF280AP59817 542 aaPredicted RBP13.12□□□□□ -0.31
LINC01560-201ENST00000357412 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
LINC01560-201ENST00000357412 ZIC5Q96T25 663 aa13.12□□□□□ -0.31
LINC01560-201ENST00000357412 BEGAINQ9BUH8 593 aa13.12□□□□□ -0.31
LINC01560-201ENST00000357412 ASTN2O75129 1339 aaPredicted RBP13.12□□□□□ -0.31
LINC01560-201ENST00000357412 BRPF1P55201 1214 aaPredicted RBP13.11□□□□□ -0.31
LINC01560-201ENST00000357412 HUNKP57058 714 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 FLIIQ13045 1269 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 GCKRQ14397 625 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 PODNQ7Z5L7 613 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 AGBL3Q8NEM8 1001 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 DCPSQ96C86 337 aaKnown RBP13.11□□□□□ -0.31
LINC01560-201ENST00000357412 GMLQ99445 158 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 GBA2Q9HCG7 927 aaPredicted RBP13.11□□□□□ -0.31
LINC01560-201ENST00000357412 MRS2Q9HD23 443 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 GGA3Q9NZ52 723 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
LINC01560-201ENST00000357412 VAMP4O75379 141 aa13.1□□□□□ -0.31
LINC01560-201ENST00000357412 CASP7P55210 303 aa13.1□□□□□ -0.31
LINC01560-201ENST00000357412 UBE3BQ7Z3V4 1068 aa13.1□□□□□ -0.31
LINC01560-201ENST00000357412 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 FAM155AB1AL88 458 aaPredicted RBP13.09□□□□□ -0.31
LINC01560-201ENST00000357412 ZNF609O15014 1411 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 CA12O43570 354 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 USP17L8P0C7I0 530 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 NOGQ13253 232 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 SCARF1Q14162 830 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 DNAAF4Q8WXU2 420 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 ABHD8Q96I13 439 aa13.09□□□□□ -0.31
LINC01560-201ENST00000357412 SALL2Q9Y467 1007 aaPredicted RBP13.09□□□□□ -0.31
LINC01560-201ENST00000357412 CSF1RP07333 972 aa13.08□□□□□ -0.32
LINC01560-201ENST00000357412 IGHMBP2P38935 993 aaKnown RBP13.08□□□□□ -0.32
LINC01560-201ENST00000357412 CCT4P50991 539 aaKnown RBP13.08□□□□□ -0.32
LINC01560-201ENST00000357412 FKBP5Q13451 457 aaPredicted RBP13.08□□□□□ -0.32
LINC01560-201ENST00000357412 ANGEL2Q5VTE6 544 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms