RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CWC25Q9NXE8 425 aaPredicted RBP14.59□□□□□ -0.07
SMC4-202ENST00000357388 SERPINA10Q9UK55 444 aa14.59□□□□□ -0.07
SMC4-202ENST00000357388 KIF21BO75037 1637 aa14.58□□□□□ -0.07
SMC4-202ENST00000357388 TMPOP42166 694 aaKnown RBP14.58□□□□□ -0.07
SMC4-202ENST00000357388 CFAP58Q5T655 872 aa14.58□□□□□ -0.07
SMC4-202ENST00000357388 MRPS27Q92552 414 aaKnown RBP14.58□□□□□ -0.07
SMC4-202ENST00000357388 ADAMTS2O95450 1211 aa14.58□□□□□ -0.08
SMC4-202ENST00000357388 PPP1R42Q7Z4L9 355 aa14.58□□□□□ -0.08
SMC4-202ENST00000357388 RNF168Q8IYW5 571 aaPredicted RBP14.58□□□□□ -0.08
SMC4-202ENST00000357388 PUS7Q96PZ0 661 aaKnown RBP14.58□□□□□ -0.08
SMC4-202ENST00000357388 SPAG5Q96R06 1193 aa14.58□□□□□ -0.08
SMC4-202ENST00000357388 GUCY1B3Q02153 619 aa14.58□□□□□ -0.08
SMC4-202ENST00000357388 GIMAP6Q6P9H5 292 aa14.58□□□□□ -0.08
SMC4-202ENST00000357388 MPRIPQ6WCQ1 1025 aa14.58□□□□□ -0.08
SMC4-202ENST00000357388 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.58□□□□□ -0.084e-98■■■■■ 943.1
SMC4-202ENST00000357388 GSTO1P78417 241 aa14.58□□□□□ -0.08
SMC4-202ENST00000357388 PTPRCP08575 1304 aa14.57□□□□□ -0.08
SMC4-202ENST00000357388 IFIT3O14879 490 aaKnown RBP14.57□□□□□ -0.08
SMC4-202ENST00000357388 INPP5BP32019 993 aa14.57□□□□□ -0.08
SMC4-202ENST00000357388 TBC1D9Q6ZT07 1266 aa14.57□□□□□ -0.08
SMC4-202ENST00000357388 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.57□□□□□ -0.08
SMC4-202ENST00000357388 TFIP11Q9UBB9 837 aaKnown RBP14.57□□□□□ -0.08
SMC4-202ENST00000357388 HMGB1P1B2RPK0 211 aaPredicted RBP14.57□□□□□ -0.08
SMC4-202ENST00000357388 PCK1P35558 622 aa14.57□□□□□ -0.08
SMC4-202ENST00000357388 PHF8Q9UPP1 1060 aa14.57□□□□□ -0.08
SMC4-202ENST00000357388 ANKRD24Q8TF21 1146 aa14.57□□□□□ -0.08
SMC4-202ENST00000357388 USP16Q9Y5T5 823 aa14.57□□□□□ -0.08
SMC4-202ENST00000357388 RRAGBQ5VZM2 374 aa14.56□□□□□ -0.08
SMC4-202ENST00000357388 GDPD2Q9HCC8 539 aa14.56□□□□□ -0.08
SMC4-202ENST00000357388 ORC3Q9UBD5 711 aaPredicted RBP14.56□□□□□ -0.08
SMC4-202ENST00000357388 ST5P78524 1137 aa14.56□□□□□ -0.08
SMC4-202ENST00000357388 SEC62Q99442 399 aaKnown RBP14.56□□□□□ -0.08
SMC4-202ENST00000357388 DBF4Q9UBU7 674 aaPredicted RBP14.56□□□□□ -0.08
SMC4-202ENST00000357388 B4DLN1 442 aa14.56□□□□□ -0.08
SMC4-202ENST00000357388 ZEB2O60315 1214 aa14.56□□□□□ -0.08
SMC4-202ENST00000357388 MRPL12P52815 198 aaKnown RBP14.56□□□□□ -0.08
SMC4-202ENST00000357388 PSMA7O14818 248 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 SH2D4BQ5SQS7 431 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 CCDC174Q6PII3 467 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 NKIRAS1Q9NYS0 192 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 HDAC9Q9UKV0 1011 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 RAPGEF3O95398 923 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 IDEP14735 1019 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 ERCC6LQ2NKX8 1250 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 ARHGAP24Q8N264 748 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 NEK1Q96PY6 1258 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 BOLA2Q9H3K6 86 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 BUB1BO60566 1050 aaPredicted RBP14.55□□□□□ -0.08
SMC4-202ENST00000357388 APBB1IPQ7Z5R6 666 aaPredicted RBP14.55□□□□□ -0.08
SMC4-202ENST00000357388 NBPF7P0C2Y1 421 aaPredicted RBP14.55□□□□□ -0.08
SMC4-202ENST00000357388 NEDD9Q14511 834 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 ZNF853P0CG23 659 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 PSMC4P43686 418 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 TTC22Q5TAA0 569 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 UTP14AQ9BVJ6 771 aaKnown RBP14.55□□□□□ -0.08
SMC4-202ENST00000357388 KAT14Q9H8E8 782 aa14.55□□□□□ -0.08
SMC4-202ENST00000357388 RUSC2Q8N2Y8 1516 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 KRT13P13646 458 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 ERMNQ8TAM6 284 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 ZNF830Q96NB3 372 aaPredicted RBP14.54□□□□□ -0.08
SMC4-202ENST00000357388 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
SMC4-202ENST00000357388 TBCAO75347 108 aaKnown RBP14.54□□□□□ -0.08
SMC4-202ENST00000357388 SYCP3Q8IZU3 236 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 FYB2Q5VWT5 728 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 PHLDB2Q86SQ0 1253 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 TMX3Q96JJ7 454 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 ECHDC1Q9NTX5 307 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 RABGAP1Q9Y3P9 1069 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 SMARCA5O60264 1052 aaPredicted RBP14.54□□□□□ -0.08
SMC4-202ENST00000357388 GMNNO75496 209 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 METAP2P50579 478 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMC4-202ENST00000357388 AOPEPQ8N6M6 819 aa14.54□□□□□ -0.08
SMC4-202ENST00000357388 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
SMC4-202ENST00000357388 RFC4P35249 363 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 NCOA7Q8NI08 942 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 SAMM50Q9Y512 469 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 BICDL2A1A5D9 508 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 USP48Q86UV5 1035 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 CCDC63Q8NA47 563 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 NDC80O14777 642 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 TROQ12816 1431 aaPredicted RBP14.53□□□□□ -0.08
SMC4-202ENST00000357388 CNGA4Q8IV77 575 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 CCDC26Q8TAB7 109 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 CCDC42Q96M95 316 aa14.53□□□□□ -0.08
SMC4-202ENST00000357388 TSPY2A6NKD2 308 aa14.52□□□□□ -0.08
SMC4-202ENST00000357388 UQCRFS1P1P0C7P4 283 aa14.52□□□□□ -0.08
SMC4-202ENST00000357388 ZNF622Q969S3 477 aaKnown RBP eCLIP14.52□□□□□ -0.085e-8■■□□□ 11.5
SMC4-202ENST00000357388 MTUS1Q9ULD2 1270 aa14.52□□□□□ -0.08
SMC4-202ENST00000357388 IFT140Q96RY7 1462 aa14.52□□□□□ -0.08
SMC4-202ENST00000357388 CCT2P78371 535 aaKnown RBP14.52□□□□□ -0.08
SMC4-202ENST00000357388 CCDC14Q49A88 953 aa14.52□□□□□ -0.08
SMC4-202ENST00000357388 TYRO3Q06418 890 aa14.52□□□□□ -0.09
SMC4-202ENST00000357388 CALCOCO2Q13137 446 aa14.52□□□□□ -0.09
SMC4-202ENST00000357388 IFNL2Q8IZJ0 200 aa14.52□□□□□ -0.09
SMC4-202ENST00000357388 NSD3Q9BZ95 1437 aa14.52□□□□□ -0.09
SMC4-202ENST00000357388 NDUFAB1O14561 156 aa14.52□□□□□ -0.09
SMC4-202ENST00000357388 CCDC38Q502W7 563 aa14.52□□□□□ -0.09
SMC4-202ENST00000357388 CFAP157Q5JU67 520 aa14.52□□□□□ -0.09
SMC4-202ENST00000357388 ZGPATQ8N5A5 531 aaKnown RBP14.52□□□□□ -0.09
SMC4-202ENST00000357388 SSH1Q8WYL5 1049 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms